Enrichment analysis of genes dysregulated in RAP1A KO
Canned Analysis
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General Information
AccessionDCA00025618
TitleEnrichment analysis of genes dysregulated in RAP1A KO
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between RAP1A KO cells and control cells in the HCT116 cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3096246
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorHollyWoodland
CREEDS IDgene:2904
Cell TypeHCT116
Gene Symbol (human)RAP1A
Gene Symbol (mouse)Rap1a
Organismhuman
Perturbation TypeKO
Characteristic Direction parameters
Control SamplesGSM1516754, GSM1516755, GSM1516756, GSM1516757, GSM1516758, GSM1516759
Perturbed SamplesGSM1516760, GSM1516761, GSM1516762, GSM1516763, GSM1516764, GSM1516765
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE61900
Gene Expression Omnibus
TALEN gene knockouts reveal no requirement for the shelterin protein Rap1 in telomere protection and length regulation
21
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