Enrichment analysis of genes dysregulated in GNMT KO
Canned Analysis
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General Information
AccessionDCA00025623
TitleEnrichment analysis of genes dysregulated in GNMT KO
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between GNMT KO cells and control cells in the liver (8 months) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3091322
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorHollyWoodland
CREEDS IDgene:2909
Cell Typeliver (8 months)
Gene Symbol (human)GNMT
Gene Symbol (mouse)Gnmt
Organismmouse
Perturbation TypeKO
Characteristic Direction parameters
Control SamplesGSM1538267, GSM1538268, GSM1538269, GSM1538270, GSM1538271
Perturbed SamplesGSM1538272, GSM1538273, GSM1538274, GSM1538275
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE63027
Gene Expression Omnibus
Expression data from GNMT and MAT1A knockout models that develop all the stages of non-alcoholic fatty liver disease including hepatocellular carcinom...
28
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