Enrichment analysis of genes dysregulated in STK11 KO
Canned Analysis
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General Information
AccessionDCA00025694
TitleEnrichment analysis of genes dysregulated in STK11 KO
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between STK11 KO cells and control cells in the LSK cell population (FACS sorted from bone marrow) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3096252
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorJuliana
CREEDS IDgene:3003
Cell TypeLSK cell population (FACS sorted from bone marrow)
Gene Symbol (human)STK11
Gene Symbol (mouse)Stk11
Organismmouse
Perturbation TypeKO
Characteristic Direction parameters
Control SamplesGSM609944, GSM609945, GSM609946
Perturbed SamplesGSM609940, GSM609941, GSM609942, GSM609943
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE24765
Gene Expression Omnibus
Gene expression profiles of Lkb1 WT and KO hematopoietic stem cells (HSCs)
7
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