Enrichment analysis of genes dysregulated in IFNL3 mutant (SNP polymorphism)
Canned Analysis
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General Information
AccessionDCA00025781
TitleEnrichment analysis of genes dysregulated in IFNL3 mutant (SNP polymorphism)
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between IFNL3 mutant (SNP polymorphism) cells and control cells in the Analysis of resected liver from hepatocellular carcinoma (HCC) patients with chronic hepatitis C (CHC) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3094484
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorVICENTE
CREEDS IDgene:3109
Cell TypeAnalysis of resected liver from hepatocellular carcinoma (HCC) patients with chronic hepatitis C (CHC)
Gene Symbol (human)IFNL3
Gene Symbol (mouse)Ifnl3
Organismhuman
Perturbation Typemutant (SNP polymorphism)
Characteristic Direction parameters
Control SamplesGSM1024521, GSM1024522, GSM1024523, GSM1024524, GSM1024525, GSM1024526, GSM1024527, GSM1024528, GSM1024529, GSM1024530, GSM1024531, GSM1024532, GSM1024533, GSM1024534, GSM1024535, GSM1024536, GSM1024537, GSM1024538, GSM1024539, GSM1024540
Perturbed SamplesGSM1024541, GSM1024542, GSM1024543, GSM1024544, GSM1024545, GSM1024546, GSM1024547, GSM1024548, GSM1024549, GSM1024550, GSM1024551, GSM1024552, GSM1024553, GSM1024554, GSM1024555, GSM1024556, GSM1024557, GSM1024558, GSM1024559, GSM1024560
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE41804
Gene Expression Omnibus
IL-28B polymorphism effect on hepatitis C virus-related hepatocellular carcinoma: resected liver
21
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