Enrichment analysis of genes upregulated in liver cirrhosis
Canned Analysis
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General Information
AccessionDCA00059424
TitleEnrichment analysis of genes upregulated in liver cirrhosis
DescriptionAn enrichment analysis was performed on the top 500 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between cells affected by liver cirrhosis and healthy control cells in the Cirrhotic Livers and Normal Kidneys from the same patients cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1bsz5
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdz:1012
Cell TypeCirrhotic Livers and Normal Kidneys from the same patients
DO IDDOID:5082
Disease Nameliver cirrhosis
Organismhuman
UMLS CUIC0023890
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size500
Control SamplesGSM1232077, GSM1232078, GSM1232079, GSM1232080, GSM1232081, GSM1232082, GSM1232083, GSM1232084, GSM1232085
Perturbed SamplesGSM1232086, GSM1232087, GSM1232088, GSM1232089, GSM1232090, GSM1232091, GSM1232092, GSM1232093
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE50892
Gene Expression Omnibus
Expression data from kidney biopsies of liver disease patients
7
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