Enrichment analysis of genes upregulated in Urothelial carcinoma in situ
Canned Analysis
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General Information
AccessionDCA00059808
TitleEnrichment analysis of genes upregulated in Urothelial carcinoma in situ
DescriptionAn enrichment analysis was performed on the top 500 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between cells affected by Urothelial carcinoma in situ and healthy control cells in the Urothelium cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1bsfz
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorJoel.Dudley
CREEDS IDdz:229
Cell TypeUrothelium
Disease NameUrothelial carcinoma in situ
Organismhuman
UMLS CUIC0334267
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size500
Control SamplesGSM71019, GSM71020, GSM71021, GSM71022, GSM71023, GSM71024, GSM71025, GSM71026, GSM71027
Perturbed SamplesGSM71070, GSM71072, GSM71074, GSM71076, GSM71077
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE3167
Gene Expression Omnibus
Carcinoma in situ lesions of the urinary bladder
7
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