Enrichment analysis of genes upregulated in colon cancer
Canned Analysis
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General Information
AccessionDCA00060328
TitleEnrichment analysis of genes upregulated in colon cancer
DescriptionAn enrichment analysis was performed on the top 500 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between cells affected by colon cancer and healthy control cells in the HT29 Colo205 cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1bsro
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatoralanstern
CREEDS IDdz:502
Cell TypeHT29 Colo205
DO IDDOID:219
Disease Namecolon cancer
Organismhuman
UMLS CUIC0007102
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size500
Control SamplesGSM846889, GSM846891
Perturbed SamplesGSM846890, GSM846892
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE34299
Gene Expression Omnibus
Colon cancer cell lines with acquired resistance to BRAF inhibitor
12
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