Enrichment analysis of genes upregulated in ulcerative colitis
Canned Analysis
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General Information
AccessionDCA00060678
TitleEnrichment analysis of genes upregulated in ulcerative colitis
DescriptionAn enrichment analysis was performed on the top 500 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between cells affected by ulcerative colitis and healthy control cells in the Intestinal biopsies cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1bt9f
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdz:710
Cell TypeIntestinal biopsies
DO IDDOID:8577
Disease Nameulcerative colitis
Organismhuman
UMLS CUIC0375359
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size500
Control SamplesGSM1012177, GSM1012179, GSM560961, GSM560962, GSM560963, GSM560964, GSM560965, GSM560966, GSM560967, GSM560968
Perturbed SamplesGSM1012178, GSM1012180, GSM560969, GSM560970, GSM560971, GSM560972, GSM560973, GSM560974, GSM560975, GSM560976
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE22619
Gene Expression Omnibus
Monozygotic twin pairs discordant for ulcerative colitis: intestinal biopsies
7
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