Enrichment analysis of genes upregulated in gastrointestinal stromal tumor
Canned Analysis
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General Information
AccessionDCA00060768
TitleEnrichment analysis of genes upregulated in gastrointestinal stromal tumor
DescriptionAn enrichment analysis was performed on the top 500 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between cells affected by gastrointestinal stromal tumor and healthy control cells in the Gastric Tissue cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1bsl6
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorJoel.Dudley
CREEDS IDdz:76
Cell TypeGastric Tissue
DO IDDOID:9253
Disease Namegastrointestinal stromal tumor
Organismhuman
UMLS CUIC0238198
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size500
Control SamplesGSM400206, GSM400208, GSM400210, GSM400212, GSM400214, GSM400220, GSM400226, GSM400227, GSM400228, GSM400230, GSM400232, GSM400240, GSM400241, GSM400242, GSM400246, GSM400251, GSM400252, GSM400258
Perturbed SamplesGSM400216, GSM400218, GSM400222, GSM400224, GSM400234, GSM400236, GSM400238, GSM400245, GSM400248, GSM400255
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE15966
Gene Expression Omnibus
Gene expression signature predictive of rapid response to imatinib mesylate in Gastrointestinal Stromal Tumor (GIST)
7
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