Enrichment analysis of genes downregulated in UPF1 KD
Canned Analysis
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General Information
AccessionDCA00063647
TitleEnrichment analysis of genes downregulated in UPF1 KD
DescriptionAn enrichment analysis was performed on the top 500 most downregulated genes identified by applying the Characteristic Direction method comparing gene expression between UPF1 KD cells and control cells in the Hela cells cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1by4j
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDgene:1039
Cell TypeHela cells
Gene Symbol (human)UPF1
Gene Symbol (mouse)Upf1
Organismhuman
Perturbation TypeKD
Characteristic Direction parameters
Gene Setdownregulated
Gene Set Size500
Control SamplesGSM29530, GSM29531
Perturbed SamplesGSM29532, GSM29534
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE1703
Gene Expression Omnibus
RENT1 nonsense-mediated mRNA decay component knockdown
7
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