Enrichment analysis of genes downregulated in NOD2 KO
Canned Analysis
FAIR Metrics
0 evaluations
General Information
AccessionDCA00063739
TitleEnrichment analysis of genes downregulated in NOD2 KO
DescriptionAn enrichment analysis was performed on the top 500 most downregulated genes identified by applying the Characteristic Direction method comparing gene expression between NOD2 KO cells and control cells in the Paneth cells (Ileum) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1c14c
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorOliFucMuc
CREEDS IDgene:1120
Cell TypePaneth cells (Ileum)
Gene Symbol (human)NOD2
Gene Symbol (mouse)Nod2
Organismmouse
Perturbation TypeKO
Characteristic Direction parameters
Gene Setdownregulated
Gene Set Size500
Control SamplesGSM1422810, GSM1422811, GSM1422812
Perturbed SamplesGSM1422813, GSM1422814, GSM1422815
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE58948
Gene Expression Omnibus
Gene expression analysis of crypt base epithelial cells from WT and Nod2-/- mice
7
FAIR Evaluation
Sorry, you must be signed in to evaluate this object.