Enrichment analysis of genes upregulated in TRNP1 KD
Canned Analysis
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General Information
AccessionDCA00064284
TitleEnrichment analysis of genes upregulated in TRNP1 KD
DescriptionAn enrichment analysis was performed on the top 500 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between TRNP1 KD cells and control cells in the embryonic cerebral cortex cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1c01a
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorFabioAmaral
CREEDS IDgene:1375
Cell Typeembryonic cerebral cortex
Gene Symbol (human)TRNP1
Gene Symbol (mouse)Trnp1
Organismmouse
Perturbation TypeKD
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size500
Control SamplesGSM997203, GSM997204, GSM997205
Perturbed SamplesGSM997207, GSM997208, GSM997209
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE40582
Gene Expression Omnibus
TRNP1 regulates expansion and folding of the mammalian cerebral cortex by control of radial glial fate
7
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