Enrichment analysis of genes upregulated in HDAC3 Intestinal Epithelial Cells specific deletion of HDAC3
Canned Analysis
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General Information
AccessionDCA00064586
TitleEnrichment analysis of genes upregulated in HDAC3 Intestinal Epithelial Cells specific deletion of HDAC3
DescriptionAn enrichment analysis was performed on the top 500 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between HDAC3 Intestinal Epithelial Cells specific deletion of HDAC3 cells and control cells in the Intestinal Epithelial Cells from large intestine cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1c1ga
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorgszeto
CREEDS IDgene:1550
Cell TypeIntestinal Epithelial Cells from large intestine
Gene Symbol (human)HDAC3
Gene Symbol (mouse)Hdac3
Organismmouse
Perturbation TypeIntestinal Epithelial Cells specific deletion of HDAC3
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size500
Control SamplesGSM1215249, GSM1215250, GSM1215251
Perturbed SamplesGSM1215252, GSM1215253, GSM1215254
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE50189
Gene Expression Omnibus
Regulation of gene expression in IECs by HDAC3 under germ-free conditions
7
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