Enrichment analysis of genes downregulated in SMCHD1 KO
Canned Analysis
FAIR Metrics
0 evaluations
General Information
AccessionDCA00065103
TitleEnrichment analysis of genes downregulated in SMCHD1 KO
DescriptionAn enrichment analysis was performed on the top 500 most downregulated genes identified by applying the Characteristic Direction method comparing gene expression between SMCHD1 KO cells and control cells in the pre-B cells, day E17.5, C57BL/6 Eµ-Myc cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1c1dd
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorOliFucMuc
CREEDS IDgene:1845
Cell Typepre-B cells, day E17.5, C57BL/6 Eµ-Myc
Gene Symbol (human)SMCHD1
Gene Symbol (mouse)Smchd1
Organismmouse
Perturbation TypeKO
Characteristic Direction parameters
Gene Setdownregulated
Gene Set Size500
Control SamplesGSM1004036, GSM1004038, GSM1004040
Perturbed SamplesGSM1004037, GSM1004039, GSM1004041
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE40879
Gene Expression Omnibus
The effect on gene expression of Smchd1 deletion in pre-B cells from E17.5 E-Myc embryos
7
FAIR Evaluation
Sorry, you must be signed in to evaluate this object.