Enrichment analysis of genes downregulated in TGFBR2 knockout
Canned Analysis
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General Information
AccessionDCA00065373
TitleEnrichment analysis of genes downregulated in TGFBR2 knockout
DescriptionAn enrichment analysis was performed on the top 500 most downregulated genes identified by applying the Characteristic Direction method comparing gene expression between TGFBR2 knockout cells and control cells in the embryonic tongue cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1c160
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorAndrew
CREEDS IDgene:2026
Cell Typeembryonic tongue
Gene Symbol (human)TGFBR2
Gene Symbol (mouse)Tgfbr2
Organismmouse
Perturbation Typeknockout
Characteristic Direction parameters
Gene Setdownregulated
Gene Set Size500
Control SamplesGSM1120480, GSM1120481, GSM1120482
Perturbed SamplesGSM1120477, GSM1120478, GSM1120479
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE45968
Gene Expression Omnibus
Gene expression profiling of the tongue in Tgfbr2 mutant mouse models
7
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