Enrichment analysis of genes upregulated in TIAM1 KD
Canned Analysis
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General Information
AccessionDCA00065624
TitleEnrichment analysis of genes upregulated in TIAM1 KD
DescriptionAn enrichment analysis was performed on the top 500 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between TIAM1 KD cells and control cells in the cell line: Y79 cell type: Retinoblastoma cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1bxur
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorgszeto
CREEDS IDgene:2236
Cell Typecell line: Y79 cell type: Retinoblastoma
Gene Symbol (human)TIAM1
Gene Symbol (mouse)Tiam1
Organismhuman
Perturbation TypeKD
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size500
Control SamplesGSM1097757, GSM1097759, GSM1097761
Perturbed SamplesGSM1097758, GSM1097760, GSM1097762
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE45130
Gene Expression Omnibus
Whole genome microarray of T lymphoma invasion and metastasis (Tiam1) silenced retinoblastoma Y79 cells
7
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