Enrichment analysis of genes downregulated in KDM1B KD
Canned Analysis
FAIR Metrics
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General Information
AccessionDCA00066263
TitleEnrichment analysis of genes downregulated in KDM1B KD
DescriptionAn enrichment analysis was performed on the top 500 most downregulated genes identified by applying the Characteristic Direction method comparing gene expression between KDM1B KD cells and control cells in the HeLa cells cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1c0we
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorlkwhite
CREEDS IDgene:2611
Cell TypeHeLa cells
Gene Symbol (human)KDM1B
Organismhuman
Perturbation TypeKD
Characteristic Direction parameters
Gene Setdownregulated
Gene Set Size500
Control SamplesGSM564835, GSM564836
Perturbed SamplesGSM564833, GSM564834
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE22859
Gene Expression Omnibus
Human LSD2/KDM1b/AOF1 regulates gene transcription by modulating H3K4me2 methylation (Affymetrix)
7
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