Enrichment analysis of genes upregulated in LAMA2 Deficiency
Canned Analysis
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General Information
AccessionDCA00067480
TitleEnrichment analysis of genes upregulated in LAMA2 Deficiency
DescriptionAn enrichment analysis was performed on the top 500 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between LAMA2 Deficiency cells and control cells in the Hind limb skeletal muscle (4-week old dy3K/dy3K animals) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1c17e
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDgene:622
Cell TypeHind limb skeletal muscle (4-week old dy3K/dy3K animals)
Gene Symbol (human)LAMA2
Gene Symbol (mouse)Lama2
Organismmouse
Perturbation TypeDeficiency
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size500
Control SamplesGSM304403, GSM304404, GSM304405
Perturbed SamplesGSM304406, GSM304407, GSM304408
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE12049
Gene Expression Omnibus
Laminin alpha2 chain deficiency effect on skeletal muscle
7
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