Enrichment analysis of genes downregulated in PAX3 Knock-in
Canned Analysis
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General Information
AccessionDCA00067485
TitleEnrichment analysis of genes downregulated in PAX3 Knock-in
DescriptionAn enrichment analysis was performed on the top 500 most downregulated genes identified by applying the Characteristic Direction method comparing gene expression between PAX3 Knock-in cells and control cells in the Palatal shelves (E14.5 embryos - palate) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1c17g
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDgene:625
Cell TypePalatal shelves (E14.5 embryos - palate)
Gene Symbol (human)PAX3
Gene Symbol (mouse)Pax3
Organismmouse
Perturbation TypeKnock-in
Characteristic Direction parameters
Gene Setdownregulated
Gene Set Size500
Control SamplesGSM287783, GSM287784, GSM287787, GSM287788
Perturbed SamplesGSM287781, GSM287782, GSM287785, GSM287786
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE11400
Gene Expression Omnibus
Transcription factor paired box 3 knockin embryos: palate
7
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