Enrichment analysis of genes upregulated in MYD88 Deficiency
Canned Analysis
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General Information
AccessionDCA00067566
TitleEnrichment analysis of genes upregulated in MYD88 Deficiency
DescriptionAn enrichment analysis was performed on the top 500 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between MYD88 Deficiency cells and control cells in the LUNG cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1bwzx
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDgene:679
Cell TypeLUNG
Gene Symbol (human)MYD88
Gene Symbol (mouse)Myd88
Organismmouse
Perturbation TypeDeficiency
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size500
Control SamplesGSM154451, GSM154452, GSM154453
Perturbed SamplesGSM154443, GSM154444, GSM154446
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE6688
Gene Expression Omnibus
Signal transduction adaptor MyD88 deficient lung response to Chlamydia pneumoniae infection
7
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