Enrichment analysis of genes upregulated in HDAC9 INHIBITION - trichostatin A
Canned Analysis
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General Information
AccessionDCA00067618
TitleEnrichment analysis of genes upregulated in HDAC9 INHIBITION - trichostatin A
DescriptionAn enrichment analysis was performed on the top 500 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between HDAC9 INHIBITION - trichostatin A cells and control cells in the Endothelial cells cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1c0hv
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDgene:736
Cell TypeEndothelial cells
Gene Symbol (human)HDAC9
Gene Symbol (mouse)Hdac9
Organismhuman
Perturbation TypeINHIBITION - trichostatin A
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size500
Control SamplesGSM136682, GSM136696, GSM136697
Perturbed SamplesGSM136698, GSM136700, GSM136702
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE5856
Gene Expression Omnibus
Histone deacetylase inhibitor effect on endothelial cells
7
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