RNA-Seq analysis comparing p53-null versus Np63/;p53-null or Np73/;p53-null thymic lymphoma tumors
Transcriptomics Dataset
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General Information
AccessionGSE60827
TitleRNA-Seq analysis comparing p53-null versus Np63/;p53-null or Np73/;p53-null thymic lymphoma tumors
DescriptionWe performed an RNA-Seq analysis comparing thymic lymphoma tissues from the p53-null(n=2) and Np63/;p53-/- (n=3) or Np73/;p53-/-(n=3). Mice at 10 weeks of age were injected with either Ad-mCherry or Ad-CRE-mCherry to delete Np63/Np73 in the thymic lmyphomas. We aimed to test by deleting the DNp63/DNp73 in these p53-deficient tumors will mediate tumor regression and analyze the expression profile of the genes
Landing Pagehttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE60827
RepositoryGene Expression Omnibus
Tools used to analyze the dataset
Dataset Accession
ARCHS4
Published September 2017
ARCHS4 provides access to gene counts from HiSeq 2000 and HiSeq 2500 platforms for human and mouse experiments from GEO ...
4645
Clustergrammer
Published October 2017
Web-based tool for visualizing and analyzing high-dimensional data as interactive and shareable heatmaps
4645
Canned Analyses generated with the dataset
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Tool Name
Interactive heatmap visualization of RNA-seq dataset GSE60827
ARCHS4, Clustergrammer
Highly interactive web-based heatmap visualization of the top 500 most variable genes in t...
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