Adiponectin improves local lipid metabolism in regenerating pancreatic islets after -cell ablation
Transcriptomics Dataset
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General Information
AccessionGSE64787
TitleAdiponectin improves local lipid metabolism in regenerating pancreatic islets after -cell ablation
DescriptionPathways that stimulate -cell regeneration remain of great clinical interest, yet effective therapeutic avenues that promote survival or reconstitution of -cell mass remain elusive. Utilizing a mouse model with inducible -cell apoptosis followed by adiponectin-mediated regeneration, we aimed to identify key molecules boosting -cell viability. Within the regenerating pancreatic islets, we examined changes within the transcriptome, and observed an extensive upregulation of genes encoding proteins involved in lipid transport and metabolism. The most prominent targets were further confirmed by quantitative PCR and immunofluorescence. Among the upstream regulators predicted by pathway analysis of the transcriptome, we detected enhanced levels of two key transcription factors, HNF4 and PPAR. Enhanced leptin levels in circulation may also contribute to the anti-lipotoxic program in islets. In summary, our data suggest that improving local lipid metabolism as an important anti-lipotoxic phenomenon to boost -cell regeneration, primarily mediated by adiponectins action on the -cells directly as well as on the adipocyte.
Landing Pagehttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE64787
RepositoryGene Expression Omnibus
Tools used to analyze the dataset

Dataset Accession

Clustergrammer
Published October 2017
Web-based tool for visualizing and analyzing high-dimensional data as interactive and shareable heatmaps
4645
ARCHS4
Published September 2017
ARCHS4 provides access to gene counts from HiSeq 2000 and HiSeq 2500 platforms for human and mouse experiments from GEO ...
4645
Canned Analyses generated with the dataset

Dataset Accession
Tool Name

Interactive heatmap visualization of RNA-seq dataset GSE64787
Highly interactive web-based heatmap visualization of the top 500 most variable genes in t...
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