RNA-seq of mouse P19 half-life samples upon loss of UPF3A
Transcriptomics Dataset
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General Information
| Accession | GSE77262 |
| Title | RNA-seq of mouse P19 half-life samples upon loss of UPF3A |
| Description | Gene duplication is a major evolutionary force driving adaptation and speciation, as it allows for the acquisition of new functions and can augment or diversify existing functions. Here, we report a gene duplication event that yielded another outcome the generation of antagonistic functions. One product of this duplication event UPF3B is critical for the nonsense-mediated RNA decay (NMD) pathway, while its autosomal counterpart UPF3A encodes an enigmatic protein previously shown to have trace NMD activity. Using loss-of-function approaches in vitro and in vivo, we discovered that UPF3A acts primarily as a potent NMD inhibitor that stabilizes hundreds of transcripts. Evidence suggests that UPF3A acquired repressor activity through simple impairment of a critical domain, a rapid mechanism that may have been widely used in evolution. Mice conditionally lacking UPF3A exhibit hyper NMD and display defects in embryogenesis and gametogenesis, consistent with UPF3A serving as a molecular rheostat that directs developmental events. |
| Landing Page | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE77262 |
| Repository | Gene Expression Omnibus |
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