Single-Cell RNAseq Reveals That Pancreatic -Cells From Very Old Male Mice Have a Young Gene Signature
Transcriptomics Dataset
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General Information
AccessionGSE83146
TitleSingle-Cell RNAseq Reveals That Pancreatic -Cells From Very Old Male Mice Have a Young Gene Signature
DescriptionAging improves pancreatic -cell function in mice. This is a surprising finding since aging is typically associated with functional decline. We performed single-cell RNA sequencing of -cells from 3 and 26 month old mice to explore how changes in gene expression contribute to improved function with age. The old mice were healthy, had reduced blood glucose levels and increased -cell mass, which correlated to their body weight. -cells from young and old mice had similar transcriptome profiles. In fact, only 193 genes (0.89%% of all detected genes) were significantly regulated ( 2-fold; false discovery rate < 0.01; normalized counts > 5). Of these, 183 were downregulated and mainly associated with pathways regulating gene expression, cell cycle, cell death and survival as well as cellular movement, function and maintenance. Collectively, our data show that -cells from very old mice have transcriptome profiles similar to those of young mice. These data support previous findings that aging is not associated with reduced -cell mass or functional -cell decline in mice.
Landing Pagehttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE83146
RepositoryGene Expression Omnibus
Tools used to analyze the dataset

Dataset Accession

ARCHS4
Published September 2017
ARCHS4 provides access to gene counts from HiSeq 2000 and HiSeq 2500 platforms for human and mouse experiments from GEO ...
4645
Clustergrammer
Published October 2017
Web-based tool for visualizing and analyzing high-dimensional data as interactive and shareable heatmaps
4645
Canned Analyses generated with the dataset

Dataset Accession
Tool Name

Interactive heatmap visualization of RNA-seq dataset GSE83146
Highly interactive web-based heatmap visualization of the top 500 most variable genes in t...
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