Transcriptom analysis of the cochleae from mice with -catenin activation, Notch1 deletion, and -catenin activation combined with Notch1 deletion in Sox2+SCs
Transcriptomics Dataset
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General Information
AccessionGSE86204
TitleTranscriptom analysis of the cochleae from mice with -catenin activation, Notch1 deletion, and -catenin activation combined with Notch1 deletion in Sox2+SCs
DescriptionWe used RNA sequencing to compare the transcripts of the cochleae from control mice and from mice with -catenin activation, Notch1 deletion, and -catenin activation combined with Notch1 deletion in Sox2+SCs. We identified the genes involved in the proliferation and transdifferentiation process that are either controlled by individual signaling pathways or by the combination of Wnt and Notch signaling.
Landing Pagehttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE86204
RepositoryGene Expression Omnibus
Tools used to analyze the dataset
Dataset Accession
ARCHS4
Published September 2017
ARCHS4 provides access to gene counts from HiSeq 2000 and HiSeq 2500 platforms for human and mouse experiments from GEO ...
4645
Clustergrammer
Published October 2017
Web-based tool for visualizing and analyzing high-dimensional data as interactive and shareable heatmaps
4645
Canned Analyses generated with the dataset
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Tool Name
Interactive heatmap visualization of RNA-seq dataset GSE86204
ARCHS4, Clustergrammer
Highly interactive web-based heatmap visualization of the top 500 most variable genes in t...
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