BioNetGen 2.2
Computational Tool
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General Information
DescriptionAdvances in rule-based modeling
Homepagehttp://github.com/RuleWorld/bionetgen
Publications
BioNetGen 2.2: advances in rule-based modeling
Leonard A. Harris; Justin S. Hogg; José-Juan Tapia; John A. P. Sekar; Sanjana Gupta; Ilya Korsunsky; Arshi Arora; Dipak Barua; Robert P. Sheehan; James R. Faeder
Summary : BioNetGen is an open-source software package for rule-based modeling of complex biochemical systems. Version 2.2 of the software introduces numerous new features for both model specification and simulation. Here, we report on these additions, discussing how they facilitate the construction, simulation and analysis of larger and more complex models than previously possible.
Availability and Implementation : Stable BioNetGen releases (Linux, Mac OS/X and Windows), with documentation, are available at http://bionetgen.org. Source code is available at http://github.com/RuleWorld/bionetgen.
Contact: bionetgen.help@gmail.com
Supplementary information: Supplementary data are available at Bioinformatics online.
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