General Information
| Description | A Galaxy tool for visualizing genome-wide chromatin signatures |
| Homepage | https://github.com/cmmt/chromatra |
Publications
CHROMATRA: a Galaxy tool for visualizing genome-wide chromatin signatures
Summary:
CHROMATRA (CHROmatin Mapping Across TRAnscripts) is a visualization tool available as plug-in for the Galaxy platform. It allows detailed yet concise presentations of data derived from ChIP-chip or ChIP-seq experiments by visualizing enrichment scores across genes or other genomic features while accounting for their length and additional characteristics such as gene expression. It integrates into typical analysis workflows and enables rapid graphical assessment and comparison of genome-wide data at a glance.
Availability:
https://github.com/cmmt/chromatra
Contact:
msk@cmmt.ubc.ca; eemberly@sfu.ca
Related Tools
W-ChIPeaks
Published December 2010
A comprehensive web application tool for processing ChIP-chip and ChIP-seq data
PathVar
Published November 2011
Analysis of gene and protein expression variance in cellular pathways using microarray data
PIQMIe
Published May 2014
A web server for semi-quantitative proteomics data management and analysis
FAIR Evaluation
Sorry, you must be signed in to evaluate this object.
