CSO validator
Computational Tool
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General Information
DescriptionImproving manual curation workflow for biological pathways
Homepagehttp://csovalidator.csml.org
Publications
CSO validator: improving manual curation workflow for biological pathways
Euna Jeong; Masao Nagasaki; Emi Ikeda; Yayoi Sekiya; Ayumu Saito; Satoru Miyano
Summary: Manual curation and validation of large-scale biological pathways are required to obtain high-quality pathway databases. In a typical curation process, model validation and model update based on appropriate feedback are repeated and requires considerable cooperation of scientists. We have developed a CSO (Cell System Ontology) validator to reduce the repetition and time during the curation process. This tool assists in quickly obtaining agreement among curators and domain experts and in providing a consistent and accurate pathway database.
Availability: The tool is available on http://csovalidator.csml.org.
Contact: masao@hgc.jp
DOI: https://doi.org/10.1093/bioinformatics/btr395
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