CistromeMap
Computational Tool
FAIR Metrics
0 evaluations
General Information
DescriptionA knowledgebase and web server for ChIP-Seq and DNase-Seq studies in mouse and human
Homepagehttp://cistrome.dfci.harvard.edu/pc/
Publications
CistromeMap: a knowledgebase and web server for ChIP-Seq and DNase-Seq studies in mouse and human
Bo Qin; Meng Zhou; Ying Ge; Len Taing; Tao Liu; Qian Wang; Su Wang; Junsheng Chen; Lingling Shen; Xikun Duan; Sheng'en Hu; Wei Li; Henry Long; Yong Zhang; X. Shirley Liu
Summary: Transcription and chromatin regulators, and histone modifications play essential roles in gene expression regulation. We have created CistromeMap as a web server to provide a comprehensive knowledgebase of all of the publicly available ChIP-Seq and DNase-Seq data in mouse and human. We have also manually curated metadata to ensure annotation consistency, and developed a user-friendly display matrix for quick navigation and retrieval of data for specific factors, cells and papers. Finally, we provide users with summary statistics of ChIP-Seq and DNase-Seq studies.
Availability: Freely available on the web at http://cistrome.dfci.harvard.edu/pc/
Contact: yzhang@tongji.edu.cn; xsliu@jimmy.harvard.edu
Metrics:
17
Canned Analyses generated by the tool
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Datasets analyzed by the tool
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FAIR Evaluation
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