GLOGS
Computational Tool
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General Information
DescriptionA fast and powerful method for GWAS of binary traits with risk covariates in related populations
Homepagehttp://www.bioinformatics.org/~stanhope/GLOGS
Publications
GLOGS: a fast and powerful method for GWAS of binary traits with risk covariates in related populations
Stephen A. Stanhope; Mark Abney
Summary: Mixed model-based approaches to genome-wide association studies (GWAS) of binary traits in related individuals can account for non-genetic risk factors in an integrated manner. However, they are technically challenging. GLOGS (Genome-wide LOGistic mixed model/Score test) addresses such challenges with efficient statistical procedures and a parallel implementation. GLOGS has high power relative to alternative approaches as risk covariate effects increase, and can complete a GWAS in minutes.
Availability: Source code and documentation are provided at http://www.bioinformatics.org/~stanhope/GLOGS.
Contact: sstanhop@bsd.uchicago.edu
Supplementary information: Supplementary data are available at Bioinformatics online.
Metrics:
3
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