Genevar
Computational Tool
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General Information
DescriptionA database and Java application for the analysis and visualization of SNP-gene associations in eQTL studies
Homepagehttp://www.sanger.ac.uk/resources/software/genevar
Publications
Genevar: a database and Java application for the analysis and visualization of SNP-gene associations in eQTL studies
Tsun-Po Yang; Claude Beazley; Stephen B. Montgomery; Antigone S. Dimas; Maria Gutierrez-Arcelus; Barbara E. Stranger; Panos Deloukas; Emmanouil T. Dermitzakis
Summary: Genevar (GENe Expression VARiation) is a database and Java tool designed to integrate multiple datasets, and provides analysis and visualization of associations between sequence variation and gene expression. Genevar allows researchers to investigate expression quantitative trait loci (eQTL) associations within a gene locus of interest in real time. The database and application can be installed on a standard computer in database mode and, in addition, on a server to share discoveries among affiliations or the broader community over the Internet via web services protocols.
Availability: http://www.sanger.ac.uk/resources/software/genevar
Contact: emmanouil.dermitzakis@unige.ch
DOI: https://doi.org/10.1093/bioinformatics/btq452
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