PREDAC-H3
Computational Tool
FAIR Metrics
0 evaluations
General Information
DescriptionA user-friendly platform for antigenic surveillance of human influenza a(H3N2) virus based on hemagglutinin sequences
Homepagehttp://biocloud.hnu.edu.cn/influ411/html/index.php
Publications
PREDAC-H3: a user-friendly platform for antigenic surveillance of human influenza a(H3N2) virus based on hemagglutinin sequences
Yousong Peng; Lei Yang; Honglei Li; Yuanqiang Zou; Lizong Deng; Aiping Wu; Xiangjun Du; Dayan Wang; Yuelong Shu; Taijiao Jiang
Motivation: Timely surveillance of the antigenic dynamics of the influenza virus is critical for accurate selection of vaccine strains, which is important for effective prevention of viral spread and infection.
Results: Here, we provide a computational platform, called PREDAC-H3, for antigenic surveillance of human influenza A(H3N2) virus based on the sequence of surface protein hemagglutinin (HA). PREDAC-H3 not only determines the antigenic variants and antigenic cluster (grouped for similar antigenicity) to which the virus belongs, based on HA sequences, but also allows visualization of the spatial distribution and temporal dynamics of antigenic clusters of viruses isolated from around the world, thus assisting in antigenic surveillance of human influenza A(H3N2) virus.
Availability and Implementation: It is publicly available from: http://biocloud.hnu.edu.cn/influ411/html/index.php .
Contacts : yshu@cnic.org.cn or taijiao@moon.ibp.ac.cn
DOI: https://doi.org/10.1093/bioinformatics/btw185
Metrics:
Canned Analyses generated by the tool
There are no indexed analyses by this tool at the moment.
Datasets analyzed by the tool
There are no indexed analyses by this tool at the moment.
FAIR Evaluation
Sorry, you must be signed in to evaluate this object.