General Information
| Description | A PyMOL plug-in to find conserved water molecules in proteins by clustering |
| Homepage | https://github.com/hiteshpatel379/PyWATER |
Publications
PyWATER: a PyMOL plug-in to find conserved water molecules in proteins by clustering
Summary
: Conserved water molecules play a crucial role in protein structure, stabilization of secondary structure, protein activity, flexibility and ligand binding. Clustering of water molecules in superimposed protein structures, obtained by X-ray crystallography at high resolution, is an established method to identify consensus water molecules in all known protein structures of the same family. PyWATER is an easy-to-use PyMOL plug-in and identifies conserved water molecules in the protein structure of interest. PyWATER can be installed via the user interface of PyMOL. No programming or command-line knowledge is required for its use.
Availability and Implementation
: PyWATER and a tutorial are available at https://github.com/hiteshpatel379/PyWATER . PyMOL is available at http://www.pymol.org/ or http://sourceforge.net/projects/pymol/ .
Contact
: stefan.guenther@pharmazie.uni-freiburg.de
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