General Information
| Description | An R/Bioconductor package for the simulation of structural variations |
| Homepage | http://www.bioconductor.org |
Publications
RSVSim: an R/Bioconductor package for the simulation of structural variations
Summary:
RSVSim is a tool for the simulation of deletions, insertions, inversions, tandem duplications and translocations of various sizes in any genome available as FASTA-file or data package in R. The structural variations can be generated randomly, based on user-supplied genomic coordinates or associated to various kinds of repeats. The package further comprises functions to estimate the distribution of structural variation sizes from real datasets.
Availability:
RSVSim is implemented in R and available at http://www.bioconductor.org. A vignette with detailed descriptions of the functions and examples is included.
Contact:
christoph.bartenhagen@uni-muenster.de
Related Tools
SVDetect
Published July 2010
A tool to identify genomic structural variations from paired-end and mate-pair sequencing data
R453Plus1Toolbox
Published February 2011
An R/Bioconductor package for analyzing Roche 454 Sequencing data
Sprites
Published February 2016
Detection of deletions from sequencing data by re-aligning split reads
FAIR Evaluation
Sorry, you must be signed in to evaluate this object.
