agplus
Computational Tool
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General Information
DescriptionA rapid and flexible tool for aggregation plots
Homepagehttp://github.com/kazumits/agplus
Publications
agplus: a rapid and flexible tool for aggregation plots
Kazumitsu Maehara; Yasuyuki Ohkawa
Summary: Aggregation plots are frequently used to evaluate signal distributions at user-interested points in ChIP-Seq data analysis. agplus, a new and simple command-line tool, enables rapid and flexible generation of text tables tailored for aggregation plots from which users can easily design multiple groups based on user-definitions such as regulatory regions or transcription initiation sites.
Availability and Implementation: This software is implemented in Ruby, supported on Linux and Mac OSX, and freely available at http://github.com/kazumits/agplus
Contact: yohkawa@epigenetics.med.kyushu-u.ac.jp
DOI: https://doi.org/10.1093/bioinformatics/btv322
Metrics:
2
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