e23D
Computational Tool
FAIR Metrics
0 evaluations
General Information
DescriptionDatabase and visualization of A-to-I RNA editing sites mapped to 3D protein structures
Homepagehttp://www.sheba-cancer.org.il/e23D
Publications
e23D: database and visualization of A-to-I RNA editing sites mapped to 3D protein structures
Oz Solomon; Eran Eyal; Ninette Amariglio; Ron Unger; Gidi Rechavi
Summary: e23D, a database of A-to-I RNA editing sites from human, mouse and fly mapped to evolutionary related protein 3D structures, is presented. Genomic coordinates of A-to-I RNA editing sites are converted to protein coordinates and mapped onto 3D structures from PDB or theoretical models from ModBase. e23D allows visualization of the protein structure, modeling of recoding events and orientation of the editing with respect to nearby genomic functional sites from databases of disease causing mutations and genomic polymorphism.
Availability and Implementation: http://www.sheba-cancer.org.il/e23D
Contact: oz.solomon@live.biu.ac.il or Eran.Eyal@sheba.health.gov.il
DOI: https://doi.org/10.1093/bioinformatics/btw204
Metrics:
Canned Analyses generated by the tool
There are no indexed analyses by this tool at the moment.
Datasets analyzed by the tool
There are no indexed analyses by this tool at the moment.
FAIR Evaluation
Sorry, you must be signed in to evaluate this object.