miRcode
Computational Tool
FAIR Metrics
0 evaluations
General Information
DescriptionA map of putative microRNA target sites in the long non-coding transcriptome
Homepagehttp://www.mircode.org
Publications
miRcode: a map of putative microRNA target sites in the long non-coding transcriptome
Ashwini Jeggari; Debora S Marks; Erik Larsson
Summary: Although small non-coding RNAs, such as microRNAs, have well-established functions in the cell, long non-coding RNAs (lncRNAs) have only recently started to emerge as abundant regulators of cell physiology, and their functions may be diverse. A small number of studies describe interactions between small and lncRNAs, with lncRNAs acting either as inhibitory decoys or as regulatory targets of microRNAs, but such interactions are still poorly explored. To facilitate the study of microRNA–lncRNA interactions, we implemented miRcode: a comprehensive searchable map of putative microRNA target sites across the complete GENCODE annotated transcriptome, including 10 419 lncRNA genes in the current version.
Availability: http://www.mircode.org
Contact: erik.larsson@gu.se
Supplementary Information: Supplementary data are available at Bioinformatics online.
Metrics:
64
Canned Analyses generated by the tool
There are no indexed analyses by this tool at the moment.
Datasets analyzed by the tool
There are no indexed analyses by this tool at the moment.
FAIR Evaluation
Sorry, you must be signed in to evaluate this object.