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GSE24807
GSE24862
GSE24896
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GSE2498
GSE2501
GSE2503
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GSE25045
GSE2507
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GSE25100
GSE2515
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GSE25238
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GSE2527
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GSE25315
GSE25412
GSE25417
GSE25423
GSE2547
GSE25480
GSE2549
GSE25502
GSE25507
GSE2556
GSE2557
GSE2558
GSE25640
GSE2565
GSE2566
GSE25673
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GSE25737
GSE25828
GSE25829
GSE25846
GSE2585
GSE25911
GSE2592
GSE25926
GSE25987
GSE2599
GSE2600
GSE26001
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GSE26051
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GSE26104
GSE26134
GSE26188
GSE2624
GSE26262
GSE2629
GSE26290
GSE26298
GSE26299
GSE26309
GSE26315
GSE2636
GSE2638
GSE2639
GSE2640
GSE26410
GSE26523
GSE2657
GSE26656
GSE26662
GSE2669
GSE26725
GSE26817
GSE26822
GSE26830
GSE26834
GSE2684
GSE2685
GSE26880
GSE26888
GSE26900
GSE26910
GSE26952
GSE26969
GSE27011
GSE27016
GSE27028
GSE2705
GSE27079
GSE27091
GSE2712
GSE27131
GSE2715
GSE27157
GSE27159
GSE27177
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GSE2724
GSE2725
GSE27261
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GSE27383
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GSE27395
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GSE2742
GSE27424
GSE27434
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GSE27452
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GSE27473
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GSE27628
GSE27630
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GSE27640
GSE27672
GSE27685
GSE27686
GSE27713
GSE2772
GSE2779
GSE27816
GSE27896
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GSE280
GSE28025
GSE28043
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GSE2812
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GSE28619
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GSE2867
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GSE28790
GSE2880
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GSE2899
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GSE30442
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GSE30531
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GSE3113
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GSE31223
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GSE31243
GSE31251
GSE3126
GSE31280
GSE3129
GSE3131
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GSE31354
GSE3140
GSE31432
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GSE31458
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GSE31646
GSE31668
GSE3167
GSE3173
GSE31747
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GSE31784
GSE31797
GSE3181
GSE3184
GSE3189
GSE31906
GSE3195
GSE31982
GSE3202
GSE3203
GSE32056
GSE32060
GSE32093
GSE32095
GSE32108
GSE3212
GSE32129
GSE32145
GSE32161
GSE32185
GSE32190
GSE32213
GSE32224
GSE32254
GSE32287
GSE32302
GSE32307
GSE32316
GSE32323
GSE32357
GSE32407
GSE32473
GSE3248
GSE3249
GSE3252
GSE3253
GSE32536
GSE32540
GSE32569
GSE3260
GSE32609
GSE32625
GSE3268
GSE32903
GSE32916
GSE32924
GSE3293
GSE32951
GSE32968
GSE32994
GSE33057
GSE3308
GSE33092
GSE3311
GSE33161
GSE3320
GSE33223
GSE3325
GSE33298
GSE33319
GSE33372
GSE3343
GSE3348
GSE33497
GSE3356
GSE33592
GSE33600
GSE33606
GSE33612
GSE33619
GSE3365
GSE33658
GSE33659
GSE33709
GSE33766
GSE33799
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GSE33870
GSE33906
GSE33921
GSE3400
GSE34060
GSE3410
GSE3414
GSE34176
GSE3418
GSE34232
GSE34274
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GSE34299
GSE34305
GSE34308
GSE34309
GSE34313
GSE34351
GSE3438
GSE34388
GSE34417
GSE34446
GSE34448
GSE34526
GSE34528
GSE34545
GSE3455
GSE34550
GSE34551
GSE34554
GSE34589
GSE34619
GSE3467
GSE34691
GSE34715
GSE34729
GSE34740
GSE34763
GSE34824
GSE34838
GSE34839
GSE3485
GSE34860
GSE34874
GSE3489
GSE34896
GSE34903
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GSE34920
GSE34925
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GSE35011
GSE35014
GSE35111
GSE3512
GSE35124
GSE35126
GSE35160
GSE35182
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GSE3524
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GSE35350
GSE35351
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GSE3542
GSE35464
GSE35468
GSE35510
GSE35511
GSE3554
GSE35543
GSE35561
GSE35592
GSE35600
GSE35616
GSE35626
GSE3565
GSE35651
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GSE3571
GSE35724
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GSE35774
GSE3583
GSE35844
GSE3585
GSE3586
GSE35909
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GSE41979
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GSE420
GSE42006
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GSE5348
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GSE54619
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GSE54622
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GSE54645
GSE54651
GSE54657
GSE54695
GSE54704
GSE54707
GSE54711
GSE54729
GSE54733
GSE54760
GSE54783
GSE54785
GSE54794
GSE54795
GSE54812
GSE54838
GSE54839
GSE54846
GSE54853
GSE54864
GSE54872
GSE54877
GSE54879
GSE54917
GSE54931
GSE54950
GSE54952
GSE54958
GSE5496
GSE54968
GSE5497
GSE54973
GSE54982
GSE54984
GSE54992
GSE5500
GSE55002
GSE55005
GSE55008
GSE55009
GSE55030
GSE5504
GSE55060
GSE55071
GSE55074
GSE5509
GSE55090
GSE5510
GSE55113
GSE55129
GSE55131
GSE55163
GSE55164
GSE55188
GSE5519
GSE55190
GSE55195
GSE55203
GSE55204
GSE55228
GSE55243
GSE55247
GSE55259
GSE55272
GSE55275
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GSE55389
GSE55391
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GSE5542
GSE55447
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GSE55492
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GSE56010
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GSE56102
GSE56122
GSE56126
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GSE56613
GSE56623
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GSE56648
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GSE56690
GSE56691
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GSE56724
GSE56748
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GSE56787
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GSE5679
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GSE56826
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GSE56966
GSE56977
GSE56983
GSE56986
GSE57027
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GSE57116
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GSE5715
GSE57170
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GSE57182
GSE57206
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GSE57231
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GSE57391
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GSE57397
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GSE57419
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GSE57433
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GSE57480
GSE57488
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GSE57500
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GSE57511
GSE57514
GSE57530
GSE57533
GSE57538
GSE57561
GSE57567
GSE57575
GSE57602
GSE57609
GSE57637
GSE5764
GSE57648
GSE57654
GSE57655
GSE57662
GSE57682
GSE57694
GSE57698
GSE57712
GSE57723
GSE57732
GSE5774
GSE57745
GSE5777
GSE57776
GSE57803
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GSE57849
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GSE57871
GSE57872
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GSE5788
GSE57892
GSE57896
GSE57910
GSE57917
GSE57919
GSE57925
GSE57926
GSE57931
GSE57945
GSE57949
GSE57957
GSE57959
GSE57961
GSE57967
GSE57973
GSE57982
GSE57984
GSE57989
GSE5800
GSE58001
GSE58008
GSE58016
GSE58017
GSE58018
GSE58025
GSE58062
GSE58074
GSE58079
GSE58088
GSE58089
GSE581
GSE58107
GSE58108
GSE5811
GSE58111
GSE58116
GSE58122
GSE58123
GSE58135
GSE58168
GSE582
GSE58206
GSE58207
GSE58208
GSE5823
GSE58239
GSE5824
GSE58242
GSE58261
GSE58283
GSE58286
GSE58310
GSE58318
GSE58323
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GSE58335
GSE58339
GSE58357
GSE58359
GSE58360
GSE58363
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GSE58371
GSE58372
GSE58375
GSE58379
GSE58384
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GSE58388
GSE58398
GSE5841
GSE58418
GSE58423
GSE58429
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GSE58453
GSE58455
GSE58465
GSE58475
GSE58493
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GSE58498
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GSE58510
GSE58514
GSE58523
GSE58524
GSE58557
GSE5856
GSE58586
GSE58594
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GSE58604
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GSE58619
GSE58626
GSE58640
GSE58645
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GSE58663
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GSE58679
GSE58707
GSE58708
GSE58719
GSE58724
GSE58732
GSE58733
GSE58740
GSE58746
GSE58757
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GSE58797
GSE58801
GSE58818
GSE58827
GSE58833
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GSE58838
GSE58871
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GSE58916
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GSE58928
GSE58933
GSE58948
GSE58960
GSE58966
GSE58971
GSE58972
GSE58973
GSE58989
GSE58993
GSE58996
GSE58998
GSE59020
GSE59055
GSE59057
GSE59066
GSE59073
GSE59089
GSE59093
GSE59100
GSE59104
GSE59114
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GSE81239
GSE81257
GSE81266
GSE81275
GSE81285
GSE81328
GSE81329
GSE81358
GSE81390
GSE81402
GSE81411
GSE81417
GSE81424
GSE81432
GSE81439
GSE81443
GSE8146
GSE81460
GSE81469
GSE81470
GSE81475
GSE81476
GSE81478
GSE81485
GSE81494
GSE8150
GSE81507
GSE81513
GSE81534
GSE81550
GSE81555
GSE8157
GSE81575
GSE81576
GSE81579
GSE81593
GSE81601
GSE81608
GSE81617
GSE81662
GSE81671
GSE81672
GSE81674
GSE81682
GSE81686
GSE81716
GSE81741
GSE81789
GSE81791
GSE81809
GSE81810
GSE81817
GSE81826
GSE81842
GSE81889
GSE81902
GSE81903
GSE81916
GSE8199
GSE81990
GSE81995
GSE81999
GSE82002
GSE82005
GSE82022
GSE82031
GSE82043
GSE82052
GSE82061
GSE82068
GSE82070
GSE82071
GSE82073
GSE82099
GSE82127
GSE82143
GSE82174
GSE82177
GSE82184
GSE82187
GSE82211
GSE82227
GSE82237
GSE82241
GSE82275
GSE82289
GSE82294
GSE82329
GSE82336
GSE8238
GSE82471
GSE82680
GSE82746
GSE82852
GSE82853
GSE82919
GSE82976
GSE83014
GSE8307
GSE83084
GSE83100
GSE83115
GSE8313
GSE83139
GSE83146
GSE83218
GSE8322
GSE83253
GSE83256
GSE83264
GSE83266
GSE833
GSE83311
GSE83314
GSE83315
GSE83322
GSE83337
GSE83340
GSE83350
GSE83356
GSE83373
GSE83415
GSE83471
GSE83479
GSE83482
GSE83483
GSE83484
GSE83506
GSE83520
GSE83551
GSE83552
GSE83555
GSE83559
GSE83584
GSE83592
GSE83601
GSE83624
GSE83635
GSE83638
GSE83660
GSE83668
GSE83712
GSE83720
GSE83765
GSE83795
GSE83797
GSE83808
GSE83823
GSE83850
GSE83873
GSE83888
GSE83948
GSE83964
GSE83978
GSE84022
GSE84023
GSE84037
GSE84055
GSE84063
GSE84085
GSE84112
GSE84133
GSE84139
GSE84145
GSE84166
GSE84170
GSE84172
GSE84175
GSE84186
GSE842
GSE8425
GSE84264
GSE84271
GSE84322
GSE8434
GSE84370
GSE84385
GSE84386
GSE844
GSE84425
GSE84432
GSE84450
GSE84471
GSE84481
GSE84526
GSE84535
GSE84553
GSE84579
GSE84592
GSE84615
GSE84630
GSE84636
GSE84639
GSE84665
GSE84666
GSE84691
GSE84722
GSE84724
GSE84759
GSE84789
GSE84795
GSE84803
GSE84873
GSE84874
GSE84875
GSE84896
GSE84942
GSE84943
GSE84944
GSE84946
GSE84953
GSE84996
GSE85
GSE85008
GSE85107
GSE85108
GSE85128
GSE85131
GSE85133
GSE85136
GSE8514
GSE85227
GSE85243
GSE85246
GSE85297
GSE85302
GSE85308
GSE85391
GSE854
GSE85414
GSE85423
GSE85447
GSE85450
GSE85465
GSE85512
GSE85513
GSE85530
GSE85531
GSE8555
GSE85553
GSE85573
GSE85576
GSE8562
GSE85631
GSE85646
GSE8565
GSE85650
GSE85674
GSE85689
GSE857
GSE85702
GSE85709
GSE85712
GSE85717
GSE85723
GSE85782
GSE85783
GSE85791
GSE85798
GSE85810
GSE85839
GSE85840
GSE85854
GSE85855
GSE8586
GSE85861
GSE8588
GSE85891
GSE85897
GSE85929
GSE85946
GSE85951
GSE85953
GSE85954
GSE85969
GSE8597
GSE860
GSE86043
GSE86053
GSE8607
GSE86079
GSE86101
GSE86102
GSE86103
GSE86104
GSE86112
GSE86144
GSE86148
GSE86159
GSE86188
GSE86190
GSE86202
GSE86204
GSE86207
GSE86235
GSE86248
GSE86261
GSE86308
GSE86318
GSE86337
GSE86356
GSE86396
GSE86417
GSE86422
GSE86426
GSE8646
GSE86491
GSE86518
GSE86520
GSE86521
GSE86562
GSE86563
GSE86564
GSE86568
GSE86573
GSE86577
GSE86611
GSE86631
GSE86654
GSE867
GSE86790
GSE868
GSE86813
GSE86817
GSE86846
GSE86857
GSE86884
GSE86895
GSE86903
GSE86929
GSE86931
GSE86940
GSE86949
GSE86977
GSE86982
GSE86985
GSE86997
GSE87050
GSE87051
GSE87069
GSE87113
GSE87144
GSE87167
GSE87186
GSE8720
GSE87202
GSE87219
GSE87231
GSE87240
GSE87257
GSE8726
GSE87290
GSE87307
GSE87316
GSE87340
GSE87344
GSE87388
GSE87400
GSE87426
GSE87448
GSE87450
GSE87453
GSE8747
GSE87487
GSE87495
GSE87497
GSE87527
GSE87530
GSE87531
GSE87586
GSE8759
GSE87606
GSE8762
GSE87635
GSE87641
GSE87668
GSE87710
GSE87758
GSE87808
GSE87812
GSE87831
GSE87870
GSE8788
GSE87899
GSE87944
GSE87945
GSE87946
GSE87948
GSE87950
GSE87951
GSE87953
GSE87954
GSE87955
GSE87956
GSE87957
GSE87958
GSE87962
GSE87963
GSE87964
GSE87969
GSE87971
GSE87973
GSE87974
GSE87975
GSE87977
GSE87979
GSE87980
GSE87981
GSE87982
GSE87985
GSE87986
GSE87987
GSE87988
GSE87989
GSE87990
GSE87991
GSE87992
GSE87993
GSE87996
GSE87997
GSE87998
GSE87999
GSE88000
GSE88001
GSE88002
GSE88004
GSE88007
GSE88008
GSE88009
GSE88012
GSE88013
GSE88014
GSE88015
GSE88016
GSE88018
GSE88020
GSE88021
GSE88026
GSE88029
GSE88031
GSE88032
GSE88034
GSE88039
GSE88040
GSE88041
GSE88043
GSE88044
GSE88045
GSE88046
GSE88047
GSE88048
GSE88049
GSE88050
GSE88051
GSE88052
GSE88053
GSE88055
GSE88056
GSE88058
GSE88059
GSE88060
GSE88061
GSE88062
GSE88063
GSE88066
GSE88067
GSE88068
GSE88069
GSE88070
GSE88074
GSE88075
GSE88076
GSE88078
GSE88080
GSE88081
GSE88083
GSE88086
GSE88087
GSE88088
GSE88089
GSE88091
GSE88092
GSE88096
GSE88097
GSE88098
GSE88099
GSE88104
GSE88105
GSE88107
GSE88108
GSE88109
GSE88110
GSE88111
GSE88114
GSE88115
GSE88116
GSE88117
GSE88118
GSE88119
GSE88122
GSE88125
GSE88126
GSE88127
GSE88129
GSE88131
GSE88132
GSE88134
GSE88137
GSE88138
GSE88139
GSE88140
GSE88144
GSE88148
GSE88149
GSE88150
GSE88151
GSE88152
GSE88154
GSE88156
GSE88157
GSE88158
GSE88159
GSE88160
GSE88163
GSE88167
GSE88170
GSE88172
GSE88173
GSE88174
GSE88175
GSE88176
GSE88178
GSE88179
GSE8818
GSE88180
GSE88181
GSE88182
GSE88184
GSE88185
GSE88189
GSE88192
GSE88193
GSE88196
GSE88198
GSE88199
GSE88200
GSE88202
GSE88203
GSE88205
GSE88207
GSE88208
GSE88209
GSE88211
GSE88215
GSE88216
GSE88219
GSE88220
GSE88221
GSE88223
GSE88224
GSE88225
GSE88226
GSE88228
GSE88229
GSE8823
GSE88231
GSE88233
GSE88234
GSE88235
GSE88237
GSE88238
GSE88239
GSE88240
GSE88241
GSE88242
GSE88243
GSE88244
GSE88245
GSE88246
GSE88248
GSE88249
GSE88250
GSE88255
GSE88256
GSE88258
GSE88259
GSE88261
GSE88264
GSE88265
GSE88266
GSE88268
GSE88269
GSE88272
GSE88276
GSE88279
GSE88280
GSE88281
GSE88283
GSE88285
GSE88287
GSE88291
GSE88292
GSE88295
GSE88298
GSE88301
GSE88302
GSE88304
GSE88305
GSE88307
GSE88309
GSE88310
GSE88312
GSE88313
GSE8832
GSE88321
GSE88322
GSE88324
GSE88325
GSE88326
GSE88328
GSE88329
GSE88330
GSE88331
GSE88332
GSE88334
GSE88335
GSE88337
GSE88338
GSE88339
GSE88340
GSE88341
GSE88342
GSE88343
GSE88347
GSE88348
GSE8835
GSE88351
GSE88352
GSE88355
GSE88357
GSE88358
GSE88359
GSE88360
GSE88361
GSE88362
GSE88363
GSE88364
GSE88366
GSE88368
GSE88370
GSE88371
GSE88372
GSE88374
GSE88375
GSE88376
GSE88382
GSE88383
GSE88384
GSE88385
GSE88387
GSE88388
GSE88389
GSE88391
GSE88394
GSE88395
GSE88397
GSE88400
GSE88401
GSE88407
GSE88408
GSE88410
GSE88411
GSE88412
GSE88413
GSE88416
GSE88417
GSE88419
GSE88420
GSE88422
GSE88423
GSE88425
GSE88427
GSE88428
GSE88429
GSE88430
GSE88433
GSE88434
GSE88439
GSE88440
GSE88441
GSE88442
GSE88443
GSE88444
GSE88446
GSE88447
GSE88452
GSE88453
GSE88454
GSE88455
GSE88456
GSE88457
GSE88459
GSE88461
GSE88462
GSE88463
GSE88466
GSE88467
GSE88468
GSE88469
GSE88470
GSE88471
GSE88472
GSE88473
GSE88474
GSE88478
GSE88480
GSE88484
GSE88485
GSE88486
GSE88487
GSE88488
GSE88489
GSE88492
GSE88493
GSE88496
GSE88498
GSE88502
GSE88504
GSE88505
GSE88506
GSE88507
GSE88508
GSE88511
GSE88513
GSE88515
GSE88516
GSE88517
GSE88519
GSE88520
GSE88521
GSE88522
GSE88523
GSE88524
GSE88525
GSE88526
GSE88527
GSE88528
GSE88529
GSE8853
GSE88530
GSE88533
GSE88535
GSE88536
GSE88537
GSE88538
GSE88540
GSE88541
GSE88543
GSE88544
GSE88545
GSE88551
GSE88552
GSE88553
GSE88554
GSE88555
GSE88556
GSE88558
GSE88560
GSE88561
GSE88562
GSE88563
GSE88564
GSE88566
GSE88568
GSE88570
GSE88572
GSE88574
GSE88576
GSE88578
GSE88582
GSE88583
GSE88584
GSE88585
GSE88587
GSE88589
GSE88590
GSE88592
GSE88593
GSE88597
GSE88598
GSE88601
GSE88602
GSE88604
GSE88607
GSE88609
GSE88610
GSE88611
GSE88612
GSE88615
GSE88617
GSE88620
GSE88622
GSE88623
GSE88626
GSE88627
GSE88628
GSE88629
GSE88630
GSE88631
GSE88632
GSE88633
GSE88635
GSE88636
GSE88637
GSE88638
GSE88639
GSE88640
GSE88641
GSE88642
GSE88645
GSE88646
GSE88647
GSE88648
GSE88649
GSE88650
GSE88651
GSE88654
GSE88655
GSE88657
GSE88659
GSE8866
GSE88660
GSE88661
GSE88662
GSE88663
GSE88664
GSE88665
GSE88667
GSE88668
GSE88670
GSE88671
GSE88672
GSE88674
GSE88675
GSE88676
GSE88678
GSE88680
GSE88681
GSE88683
GSE88684
GSE88685
GSE88687
GSE88689
GSE88691
GSE88692
GSE88693
GSE88696
GSE88773
GSE88777
GSE88801
GSE88840
GSE88850
GSE88943
GSE88946
GSE88957
GSE88959
GSE88967
GSE88987
GSE88998
GSE89008
GSE89018
GSE89057
GSE89122
GSE89132
GSE89154
GSE89171
GSE8920
GSE89207
GSE89221
GSE89225
GSE89232
GSE89270
GSE89313
GSE89339
GSE89364
GSE89442
GSE89452
GSE89479
GSE89505
GSE89511
GSE89546
GSE89547
GSE89619
GSE89621
GSE89622
GSE89633
GSE8969
GSE897
GSE89712
GSE89714
GSE8972
GSE89729
GSE89762
GSE89771
GSE89801
GSE89834
GSE89872
GSE89879
GSE89895
GSE89926
GSE89950
GSE89984
GSE89991
GSE90013
GSE90081
GSE90194
GSE90195
GSE90196
GSE90197
GSE90198
GSE90199
GSE90200
GSE90201
GSE90202
GSE90203
GSE90204
GSE90205
GSE90206
GSE90207
GSE90208
GSE90209
GSE90210
GSE90211
GSE90212
GSE90213
GSE90214
GSE90215
GSE90216
GSE90217
GSE90218
GSE90257
GSE90258
GSE90259
GSE90260
GSE90261
GSE90262
GSE90263
GSE90264
GSE90265
GSE90266
GSE90267
GSE90271
GSE90273
GSE90274
GSE90276
GSE90277
GSE90278
GSE90279
GSE9037
GSE9038
GSE90463
GSE90466
GSE90531
GSE90615
GSE90682
GSE90796
GSE90809
GSE90851
GSE90890
GSE90908
GSE90961
GSE91016
GSE9118
GSE9123
GSE9124
GSE9128
GSE91402
GSE9161
GSE9166
GSE9187
GSE92282
GSE923
GSE92301
GSE92317
GSE9244
GSE9247
GSE92572
GSE92576
GSE92592
GSE92629
GSE92720
GSE92870
GSE92905
GSE92979
GSE93030
GSE93061
GSE93109
GSE93132
GSE932
GSE93268
GSE9328
GSE93282
GSE9330
GSE934
GSE935
GSE937
GSE9371
GSE9447
GSE9452
GSE9476
GSE9480
GSE9484
GSE9549
GSE9567
GSE9574
GSE9579
GSE9677
GSE9692
GSE9750
GSE977
GSE9800
GSE9877
GSE988
GSE9913
GSE9951
GSE9978
HMS20268
HMS20269
HMS20278
HMS20279
HMS20280
HMS20281
HMS20282
HMS20283
HMS20284
HMS20285
HMS20286
LDS-1006
LDS-1007
LDS-1008
LDS-1009
LDS-1010
LDS-1011
LDS-1012
LDS-1013
LDS-1014
LDS-1015
LDS-1016
LDS-1017
LDS-1018
LDS-1019
LDS-1020
LDS-1022
LDS-1023
LDS-1024
LDS-1025
LDS-1026
LDS-1027
LDS-1028
LDS-1029
LDS-1030
LDS-1032
LDS-1033
LDS-1034
LDS-1035
LDS-1036
LDS-1037
LDS-1038
LDS-1039
LDS-1040
LDS-1041
LDS-1042
LDS-1043
LDS-1044
LDS-1045
LDS-1046
LDS-1047
LDS-1048
LDS-1049
LDS-1050
LDS-1051
LDS-1052
LDS-1053
LDS-1054
LDS-1055
LDS-1056
LDS-1057
LDS-1058
LDS-1059
LDS-1060
LDS-1061
LDS-1062
LDS-1063
LDS-1064
LDS-1065
LDS-1066
LDS-1067
LDS-1068
LDS-1069
LDS-1070
LDS-1071
LDS-1072
LDS-1106
LDS-1123
LDS-1126
LDS-1208
LDS-1209
LDS-1219
LDS-1220
LDS-1221
LDS-1250
LDS-1251
LDS-1252
LDS-1253
LDS-1254
LDS-1255
LDS-1256
LDS-1257
LDS-1261
LDS-1262
LDS-1263
Tool Name
Enrichr
Characteristic Direction
L1000CDS2
PAEA
ARCHS4
Clustergrammer
GeneMANIA
Drug Response Browser 1
Breast Cancer Browser
GF Response Browser 2
RTK Profile Browser 1
RTK Profile Browser 2
GF Response Browser 1
GR Browser
Drug Response Browser 2
Drug-Pathway Browser
Adaptation Browser 2
Adaptation Browser 1
Organism
mouse
human
rat
Geneset
downregulated
upregulated
Direction
mimic
reverse
Cell Type
Heart left ventricles above LAD artery (AMI -induced by left coronary artery ligation) - 1 Hour
Heart left ventricles above LAD artery (AMI -induced by left coronary artery ligation) - 4 Hours
K562 leukemia cell line
K562 leukemia cell line (VIII)
K562 leukemia cell line (VII) - 24 Hours
K562 leukemia cell line (V) - 24 Hours
K562 leukemia cell line (IV) - 24 Hours
K562 leukemia cell line (III) - 24 Hours
K562 leukemia cell line (II) - 24 Hours
K562 leukemia cell line (I) - 24 Hours
Primary Colorectal Adenocarcinoma
colon
T cell lymphoblastic leukemia cell line CEM-c1
F9 teratocarcinoma cells
HL60 cells
liver
rat proximal renal tubule cell line (NRK-52E), 6h treatment
rat proximal renal tubule cell line (NRK-52E), 24h treatment
rat proximal renal tubule cell line (NRK-52E), 72h treatment
Kidney
brain, 12 week treatment
brain, 4 week treatment
midbrain
lung epithelial A549 cells, 6h treatment
lung epithelial A549 cells, 24h treatment
lung subsegment
Alveolar Macrophages
TOV112D
C57BL/6J kidneys
uninfected hepatoma Huh7.5.1 cells
No Data
Human primary fibroblasts (IMR90) stably expressing H-RasV12
Primary umbilical vein endothelial cell
CD4+
Eµ-myc transgenic lymphoma cells deficient in Suv39h1
Breast adenocarcinoma MCF-7 cell line
glucocorticoid (GC)-resistant lymphoblastic leukemia CEM-C7H2 T-ALL cell line
MCF-7 breast cancer cells
liver tissue
colon epithelium
RWPE1 cells
RWPE1 - Prostate epithelial cell line - 6 Hours
RWPE1 - Prostate epithelial cell line - 24 Hours
RWPE1 - Prostate epithelial cell line - 48 Hours
L-540
BRAFV600E A375 human melanoma cells
LY2
HepG2
skin cells
brain
cortical pyramidal cells
AGS cells
lung
MCF-7
MCF-7 BREAST CANCER cell line
HT29 3D culture cell - Day 1
HT29 3D culture cell - Day 3
HT29 3D culture cell - Day 8
Primary leukemic cells (purified from peripheral blood) - 48 Hours
Primary leukemic cells (purified from peripheral blood) - 72 Hours
Chronic myelogenous leukemia CD34+CD38- cells
brain frontal cortex tissue
synovial knee tissue
Philadelphia chromosome positive CML CD34+ cells
Chronic myelogenous leukemia CD34+ cells
TAMs (tumor associated macrophages)
Bach2 wildtype pre-B ALL cells
GIST882 cells
K562 cells
CD34+ CML cells
A549
MCF-7/ADR
H1299
ischemic cerebral cortex
PBMC
HT29
HT29 colon adenocarcinoma cell line
TK6
DBTRG
U87
WM164 BRAF mutant Melanoma cells
COLO829 human melanoma cell line (BRAFV600E mutated)
COLO829 human melanoma cell line-MITF Knockdown (BRAFV600E mutated)
SW1736 thyroid cancer cell line (vemurafenib-refractory cell line) - 1 Hour
SW1736 thyroid cancer cell line (vemurafenib-refractory cell line) - 6 Hours
SW1736 thyroid cancer cell line (vemurafenib-refractory cell line) - 48 Hours
SK-MEL-28 melanoma cell line (vemurafenib sensitive cell line) - 1 Hour
SK-MEL-28 melanoma cell line (vemurafenib sensitive cell line) - 6 Hours
SK-MEL-28 melanoma cell line (vemurafenib sensitive cell line) - 48 Hours
M229 melanoma cell line
M249_R4 melanoma resistant sub-line
M249 melanoma cell line
M229_R5 melanoma resistant sub-line
M238 melanoma cell line
M238_R1 melanoma resistant sub-line
K562 (human myeloid leukemia cells)
C33KD2 cells
skin
NCI-H69
left internal mammary artery
CD19+ selected B cells
MGHU3 bladder cancer cells
human multiple myeloma cell line
pancreas
BT474 (lapatinib-sensitive) HER2+ breast cancer cells
BT474-J4 (acquired lapatinib-resistance) HER2+ breast cancer cells
lapatinib-sensitive ErbB2-positive cells treated with 0.1 uM lapatinib
lapatinib-sensitive ErbB2-positive cells treated with 1 uM lapatinib
lapatinib-resistant ErbB2-positive cells treated with 0.1 uM lapatinib
lapatinib-resistant ErbB2-positive cells treated with 1 uM lapatinib
lapatinib sensitive and lapatinib resistant ErbB2-positive breast cancer cells
SKBR3 parental and resistant (SKBR3-R) cell lines
3T3-L1 adipocytes
subcutaneous fat tissues of type 2 Lepr(db/db) mice
plaque on epidermis
cultured molar teeth from embryonic day 14 fetuses
whole-blood leukocytes
diffuse large B cell lymphoma SKI-DLCL cells
granulocyte
PBMC (peripheral blood mononuclear cells)
lesioned skin
skin lesion
striatum, day 1 treatment
striatum, day 6 treatment
striatum, day 12 treatment
striatum, day 15 withdrawal
striatum, day 18 withdrawal
striatum, day 24 withdrawal
hippocampus
primary human hepatocytes (PHH)
primary hepatocytes (PHs) and HepG2 liver cells
primary lung fibroblasts
Hippocampus (of Sprauge-Dawley males) - 168 Hours after exposure
Hippocampus (of Sprauge-Dawley males) - 1 Hour after exposure
Hippocampus (of Sprauge-Dawley males) - 24 Hours after exposure
Hippocampus (of Sprauge-Dawley males) - 3 Hours after exposure
Hippocampus (of Sprauge-Dawley males) - 48 Hours after exposure
Hippocampus (of Sprauge-Dawley males) - 6 Hours after exposure
Hippocampus (of Sprauge-Dawley males) - 72 Hours after exposure
Hippocampus (of Sprauge-Dawley males) - 96 Hours after exposure
Metastatic alveolar soft part sarcoma (ASPS) biopsies
A375 melanoma cell line - 1 Hour
A375 melanoma cell line - 2 Hours
A375 melanoma cell line - 4 Hours
A375 melanoma cell line - 8 Hours
A375 melanoma cell line - 24 Hours
Aortic valve interstitial cells
MV4 -11 leukemia cell line - Day 4
MV4 -11 leukemia cell line - Day 6
MOLM-13 leukemia cell line - Day 6
MCF-7 breast cancer (BC) cells
Ishikawa endometrial cells - 8 Hours 10nM
Ishikawa endometrial cells - 8 Hours 100 pM
Ishikawa endometrial cells - 8 Hours 1uM
Ishikawa endometrial cells - 8 Hours 1pM
Ishikawa endometrial cells - 24 Hours 10nM
Ishikawa endometrial cells - 24 Hours 100pM
Ishikawa endometrial cells - 24 Hours 1uM
Ishikawa endometrial cells - 24 Hours 1pM
Ishikawa endometrial cells - 48 Hours 10nM
Ishikawa endometrial cells - 48 Hours 100pM
Ishikawa endometrial cells - 48 Hours 1uM
Ishikawa endometrial cells - 48 Hours 1pM
brainstem
frontal cortex
left sciatic nerve
diabetes
perpheral sciatic nerve
liver b
mammary gland
LIVER from Sprague Dawleys
LUNG from Sprague Dawleys
MAMMARY GLAND from Sprague Dawleys
proximal small intestine
distal small intestine
paclitaxel-resistant MDA-MB-231 cancer cells
c57bl6j
Embryonic FIBROLAST - Rb null mutant
wild type
tristerapolin-deficient
melanoma
Fetal CONDROCYTES treated with pharmacological doses of dexamethasone (DEX) for 24 hours.
Airway smooth muscle cells
aci
copenhagen
brown norway
MCF7/BUS human breast cancer cells - 10 pM
MCF7/BUS human breast cancer cells - 30 pM
MCF7/BUS human breast cancer cells - 60 pM
MCF7 cells depleted of ERK1 - 4 Hours after treatment
MCF7 cells depleted of ERK2 - 4 Hours after treatment
MCF7 cells depleted of ERK2 - 24 Hours after treatment
MCF-7 breast cancer cells - 24 Hours
eralpha
hme-cc
me16c
zr-75-1
normal scar
stomach
jejunum
control
fear
Culture from ovaries neonates
Culture from neonates ovaries
Frontal Cerebral Cortex - 1mg/kg
Frontal Cerebral Cortex - 10mg/kg
Frontal Cerebral Cortex - 0.3mg/kg
Frontal Cerebral Cortex - 3mg/kg
17 months
3 months
NSCLC adenocarcinoma cell line
stromal-vascular cells
Stromal-vascular cells (PRDM16-deficient inguinal white adipose tissue)
NB4 APL 9 - acute promyelocytic leukemia cells - (TG2-knockdown) 48 Hours
NB4 APL 9 acute promyelocytic leukemia cells - (TG2-knockdown) 72 Hours
NB4 APL 9 acute promyelocytic leukemia cells - 72 Hours
adipose tissue
skeletal muscle
36M2 epithelial ovarian cancer cells
epithelial ovarian cancer cell line
H295R human adrenal carcinoma cells
H295R cells
hippocampus, female
hippocampus, male
RT112 cancer cell line (FGFR3 knocked down with shRNA 2-4)
RT112 cancer cell line (FGFR3 knocked down with shRNA 4-1)
RT112 cancer cell line (FGFR3 knocked down with shRNA 6-16)
HepG3 cell line (THRA wild type)
HepG3 cell line (THRB wild type)
HepG3 cell line (THRA-HCC Mutant al)
HepG3 cell line (THRA-RCCC Mutant 6a)
HepG3 cell line (THRB- HCC mutant bN)
HepG3 cell line (THRB-RCCC Mutant 15b)
LNCaP prostate cancer cells
SRF Silenced cells
Adrenocortical carcinoma cell line
MCF7 breast adenocarcinoma cells - 12 Hours
MCF7 breast adenocarcinoma cells - 24 Hours
SLM2 melanoma cells
THP-1 acute monocytic leukemia cells
HL60 promyelocytic leukemia cell line
lymphoblast
HT29 colon adenocarcinoma cells (3 Hours following treatment with 2nM)
HT29 colon adenocarcinoma cells (3 Hours following treatment with 10nM)
HT29 colon adenocarcinoma cells (6 Hours following treatment with 2nM)
HT29 colon adenocarcinoma cells (6 Hours following treatment with 10nM)
HT29 colon adenocarcinoma cells (12 Hours following treatment with 2nM)
HT29 colon adenocarcinoma cells (12 Hours following treatment with 10nM)
psoriatic skin from back
HeLa cells - 0 Hour
HeLa cells - 1 Hour
HeLa cells - 3 Hours
HeLa cells - 6 Hours
RKO colorectal carcinoma cell line ( 6 Hours after exposure to 5uM)
RKO colorectal carcinoma cell line (24 Hours after exposure to 5uM)
RKO colorectal carcinoma cell line (6 Hours after exposure to 20uM)
RKO colorectal carcinoma cell line (24 Hours after exposure to 20uM)
RKO colorectal carcinoma cell line (6 Hours after exposure to 60uM)
RKO colorectal carcinoma cell line (24 Hours after exposure to 60uM)
F9 embryonal carcinoma cell line
Breast Cancer tumor core biopsies
DHT-stimulated LNCaP prostate cells
bronchial biopsies
OE-E6/7 cells
hippocampal CA1 region
NCI-H460 human lung large cell carcinoma cell line - 2 Hours
NCI-H460 human lung large cell carcinoma cell line - 24 Hours
breast cancer biopsies
A549 lung cancer cells
hearts from obese diabetic C57BL/KsJ-db/db mice
chondrocytes
fibroblasts
osteoblasts
LUNG (wild type)
Lung (Fra-1 deficient mutants)
lung alveolar type 2 cells (Sprague-Dawley males following 6 weeks of chronic ingestion of alcohol)
Sciatic nerve
Spinal cord - (30 mg/kg for 21 days)
Hypothalamus (postnatal day70 male rats exposed in utero to dioxin at gestational day15)
Pituitary gland (postnatal day70 male rats exposed in utero to dioxin at gestational day15)
HEK293
MH1C1 liver cell line - 160 uM
MH1C1 liver cell line - 310 uM
H4IIEC3 liver cell line - 29uM
H4IIEC3 liver cell line - 62uM
Haematopoietic stem cells (male)
Hematopoietic stem cell (Female)
PC-3 prostate cancer cells
PC3 prostate cancer cell line
Lung (FIZZ2 deficient)
SKOV3 ovarian cancer xenograft tumor
Macrophages
Mtb H37Rv-infected THP-1 macrophages
HeLa cell line (treated with casiopeinas II-gly 40µM for 6 hours)
Mc3T3-E1 osteoblast (OB) cell line (50ug of ascorbic acid for 5 days)
CAL27 squamous cell carcinoma (HNSCC) cell line - (15nM for 13 hours)
SC263 squamous cell carcinoma (HNSCC) cell line - 15nM for 13 hours
LICR HN2 squamous cell carcinoma (HNSCC) cell line - 15nM for 13 hours
LICR HN1 squamous cell carcinoma (HNSCC) cell line - 15nM for 13 hours
ME180 squamous cell carcinoma cell line - 1 hour 10μM
ME180 squamous cell carcinoma cell line - 3 hours 10μM
ME180 squamous cell carcinoma cell line - 6 hours 10μM
HeyA8 ovarian carcinoma cell line
HeyC2 ovarian carcinoma cell line
A2780 ovarian carcinoma cell line
OVCA420 ovarian carcinoma cell line
OVCA429 ovarian carcinoma cell line
PA-1 ovarian carcinoma cell line
TYK-nu ovarian carcinoma cell line
CH1 ovarian carcinoma cell line
OV90 ovarian carcinoma cell line
FU-OV-1 ovarian carcinoma cell line
A2008 ovarian carcinoma cell line
DOV13 ovarian carcinoma cell line
OVCA433 ovarian carcinoma cell line
OVCAR-10 ovarian carcinoma cell line
C13 ovarian carcinoma cell line
IGROV-1 ovarian carcinoma cell line
OVCAR-8 ovarian carcinoma cell line
Primary smooth muscle cells
OV1002 ovarian cancer cell line - Day 2
OV1002 ovarian cancer cell line - Day 4
OV1002 ovarian cancer cell line - Day 1
OV1002 ovarian cancer cell line - Day 7
OV1002 ovarian cancer cell line - Day 14
SCC25 tongue epidermal keratinocyte
KJD SV40 virus transformed epidermal keratinocyte
CD3+ T cell
CD14+ monocytes (from individuals on a diet supplemented with quercetin for 2 weeks)
Peripheral mononuclear blood cells (NAB+) - 12 months
Peripheral mononuclear blood cells (NAB+) - 24 months
Peripheral mononuclear blood cells (NAB-) 3 months
Peripheral mononuclear blood cells (NAB-) 12 months
Peripheral mononuclear blood cells (NAB-) 24 months
Peripheral mononuclear blood cells (NAB+) - 3 Months of treatment
Hematopoietic CD34+ cells
H720 cell line(lung cancer)
A549 cell line (lung cancer)
Peripheral blood monocytes
Monocytes from (male, familial combined hyperlipidemia (FCH) patients) - following 4 weeks of treatment
AEC (primary airway epithelial cells) - 2 Hours with 0.4mM
AEC (primary airway epithelial cells) - 6 Hours with 0.4mM
AEC (primary airway epithelial cells) - 2 Hours with 1mM
AEC (primary airway epithelial cells) - 6 Hours with 1mM
AEC (primary airway epithelial cells) - 2 Hours with 4mM
AEC (primary airway epithelial cells) - 6 Hours with 4mM
Endometrium (postmenopausal)
Brains of C57Bl/6J animals (fed a creatine supplemented diet for 6 months)
Skeletal muscles (of HIV-infected males)
Embryoid bodies - 12 Hours
Embryoid bodies - 24 Hours
Embryoid bodies - 48 Hours
Colon (DSS - induced colitis)
Mammary epithelial cells (MCF10A/HER2/FKBP/HA cells)
Heart (Wild Type)
Heart (PKCζ - Knockout)
AML FAB class M2 - acute myeloid leukemia lymphoblasts
AML FAB class M4 - acute myeloid leukemia lymphoblasts
Primary chronic lymphocytic leukemia cell - 2 uM for 24 Hours
AGS gastric adenocarcinoma cells
AGS gastric adenocarcinoma cells (NET1 knockdown - 63shRNA)
AGS gastric adenocarcinoma cells (NET1 knockdown - 65shRNA)
Mesentery - BALB/c mice - Day 3
Mesentery - BALB/c mice - Day 18
Mesentery - DBA mice - Day 3
Mesentery - DBA mice - Day 18
Mesentery - BALB/DBA F1 hybrid mice - Day 3
Immortalized B cells (from MZ twin pairs - African American ancestry)
MCF7 breast cancer cells - 100nM
MCF7 breast cancer cells - 500nM
HT29 and Colo205 parental colorectal cancer (CRC) cell lines
Cell lines U937-ZXD family zinc finger C
SW480 cancer cells
Islets of Balb/c mice
dorsal skin
U937 cell line (monocyte)
U937 monoctyes exposed to oxidative stress - 4 Hours
U937 monoctyes exposed to oxidative stress - 18 Hours
A673
RS4.11 leukemia cell line
HepG2 liver cell line - 0.5 Hours
HepG2 liver cell line - 6 Hours
HepG2 liver cell line - 24 Hours
HepG2 cells (metabolically competent) - 0.5 Hours after exposure
HepG2 cells (metabolically competent) - 1.5 Hours after exposure
HepG2 cells (metabolically competent) - 6 Hours after exposure
HepG2 cells (metabolically competent) - 18 Hours after exposure
Forebrain astrocytes - 2 Hours
Forebrain astrocytes - 6 Hours
Forebrain astrocytes - 12 Hours
Forebrain astrocytes - 24 Hours
H4-II-E-C3 LIVER-derived cell line - 400 uM
H4-II-E-C3 LIVER-derived cell line - 140 uM
H4-II-E-C3 LIVER-derived cell line - 40 uM
H4-II-E-C3 LIVER-derived cell line - 1.2 uM
H4-II-E-C3 LIVER-derived cell line - 0.55 uM
H4-II-E-C3 LIVER-derived cell line - 0.2 uM
H4-II-E-C3 LIVER-derived cell line - 10 uM
H4-II-E-C3 LIVER-derived cell line - 1 uM
Striatum
Striatum - C57BL/65 mice - Acute morphine treatment
Striatum - DBA/2J mice - Acute morphine treatment
Striatum - SWR/J mice - Acute morphine treatment
Striatum - 129P3/J mice - Chronic morphine treatment
Striatum - DBA/2J mice - Chronic morphine treatment
Striatum - SWR/J mice - Chronic morphine treatment
lymphoblastoid cells
jeujunum
lymphocytes
Pancreatic Cancer Cell Lines
Lymphoblastoid Cell Lines
Liver (129S1/SvImJ strain) - 24 hours after treatment
Liver ( A/J strain) - 24 hours after treatment
Liver ( AKR/J strain) - 24 hours after treatment
Liver ( B6C3F1/J strain) - 24 hours after treatment
Liver (BALB/cByJ strain) - 24 hours after treatment
Liver ( BTBR+tf/J strain) - 24 hours after treatment
Liver ( C3H/HeJ strain) - 24 hours after treatment
Liver ( CAST/EiJ strain) - 24 hours after treatment
Liver ( DBA/2J strain) - 24 hours after treatment
Liver ( MOLF/EiJ strain) - 24 hours after treatment
Liver ( NOD/LtJ strain) - 24 hours after treatment
Liver ( NZW/LacJ strain) - 24 hours after treatment
Liver ( PDW/PhJ strain) - 24 hours after treatment
Liver ( c57BL/6J strain) - 24 hours after treatment
Lung (from B6D2F1 females infected with Mycobacterium tuberculosis) - 42 days post infection
Lung (from B6D2F1 females infected with Mycobacterium tuberculosis) - 63 days post infection
hNHEPS Hepatocytes - 6 Hours after exposure with 0.1 μM
hNHEPS hepatocytes exposed to 10μM
LUNGS of C57BL/6 males (on AIN-76A Diet) - Injection 1mg/kg
LUNGS of C57BL/6 males (on AIN-76A Diet) - Added to drinking water -100ppb
LUNGS of C57BL/6 males (on AIN-76A Diet) - Added to drinking water -10ppb
LUNGS of C57BL/6 males (on AIN-76A Diet) - Added to food - 10ppb
LUNGS of C57BL/6 males (AIN-76A on Diet) - Injection 1mg/kg
LUNGS of C57BL/6 males (on LRD-5001 Diet) - Added to drinking water - 100ppb
LUNGS of C57BL/6 males (on LRD-5001 Diet) - Added to drinking water - 10ppb
Liver (from Balb/C males) - 1 Hour
Liver (from Balb/C males) - 3 Hours
Liver (from Balb/C males) - 6 Hours
Skeletal muscle - Vastus lateralis muscle biopsies - from insulin-sensitive subjects
Skeletal muscle - Vastus lateralis muscle biopsies - from diabetic patients
WI-38 Lung fibroblasts - 1uM
WI-38 Lung fibroblasts - 0.5uM
WI-38 Lung fibroblasts - 0.1uM
RAW 264.7 macrophage cell line - 0.14 mM
RAW 264.7 macrophage cell line - 0.35 mM
RAW 264.7 macrophage cell line - 0.7 mM
RAW 264.7 macrophage cell line - 1.4 mM
RAW 264.7 macrophage cell line - 2.1 mM
RAW 264.7 macrophage cell line - 2.8 mM
RAW 264.7 macrophage cell line - 3.5 mM
Forebrains - Animals treated with 5mg/kg
Forebrains - Animals treated with 20mg/kg
Forebrains - Animals treated with 50mg/kg
Forebrains - Animals treated with 200mg/kg
Forebrains - Animals treated with 500mg/kg
LIVERS (animals exposed to low doses from gestational day 15 to post-natal day 20) - 0.002mg/kg
LIVERS (animals exposed to low doses from gestational day 15 to post-natal day 20) - 0.2mg/kg
Endothelial cells (cultured umbilical vein endothelial cells) - treated with 1 nmol/L estradiol for 24 hours
Kidney (of BALB/c females) - Intravenous - 50mg/kg
Kidney (of BALB/c females) - Intravenous - 200mg/kg
Kidney (of BALB/c females) - Intravenous - 400mg/kg
Kidney (of BALB/c females) - Intraperitoneal - 50mg/kg
Kidney (of BALB/c females) - Intraperitoneal - 200mg/kg
Kidney (of BALB/c females) - Intraperitoneal - 400mg/kg
NPrEC immortalized normal prostate epithelial cell line - 2.5uM - 0 Hour
NPrEC immortalized normal prostate epithelial cell line - 2.5uM - 8 Hour
NPrEC immortalized normal prostate epithelial cell line - 2.5uM - 16 Hour
NPrEC immortalized normal prostate epithelial cell line - 2.5uM - 32 Hour
Colonic mucosa (animals fed a diet supplemented with quercetin)
LNCaP prostate cancer cells - 4 Hours
LNCaP prostate cancer cells - 16 Hours
Testis - animals treated for 8 Hours
Testis - animals treated for 20 Hours
Caco-2 colon cancer cells - 5 days after treatment
Caco-2 colon cancer cells - 10 days after treatment
HL-60 leukemia cells
HL-60 cells
ileum (wild type)
jejunum (wild type)
liver (wild type)
colon (POR null)
ileum (POR null)
jejunum (POR null)
liver (POR null)
liver (Western diet)
liver (treated with streptozotocin)
BV-2 microglial cells
HepG2 cells
MCF10A cells
osteoclasts (wild type)
osteoclasts (CT-receptor-knockout)
monocyte
heart
cerebellum
PC-3 cells
Brains of aged (30-month-old) B6C3F1 animals fed a diet containing alpha-tocopherol
Hearts of 30-month-old B6C3F1 animals fed a diet supplemented with alpha-tocopherol
Skins biopsies from nickel-allergic patients whose skins were exposed to nickel - 7 hours
Skins biopsies from nickel-allergic patients whose skins were exposed to nickel - 48 hours
Skins biopsies from nickel-allergic patients whose skins were exposed to nickel - 96 hours
Astrocytes
Peripheral blood-derived MONOCYTES - 2 hours
Peripheral blood-derived MONOCYTES - 4 hours
Peripheral blood-derived MONOCYTES - 8 hours
Peripheral blood-derived MONOCYTES - 24 hours
muscle
Adipose
3T3-L1 progenitor adipocytes
peripheral blood mononuclear cells (PBMCs)
vastus lateralis muscle
MCF7 cells
CD133+ and CD133- cells
gastrocnemius muscle
neocortex
Oct4-GiP mouse embryonic stem (ES) cells
mouse embryonic fibroblast cells (MEF cells)
MaF pre-induced pluripotent stem cells
aorta
Ovaries - cultured neonatal ovaries treated with progesterone for 2 days
HepG2 - liver carcinoma cells
Peripheral blood mononuclear cells
Nasal EPITHELIA exposed to 0.7ppm - Inhalation - 6 Hours
Nasal EPITHELIA exposed to 0.7ppm - Inhalation - 24 Hours
Nasal EPITHELIA exposed to 0.7ppm - Inhalation - 5 Days
Nasal EPITHELIA exposed to 0.7ppm - Inhalation - 8 Days
Nasal EPITHELIA exposed to 0.7ppm - Inhalation - 19 Days
Nasal EPITHELIA exposed to 2 ppm - Inhalation - 6 Hours
Nasal EPITHELIA exposed to 2 ppm - Inhalation - 24 Hours
Nasal EPITHELIA exposed to 2 ppm - Inhalation - 5 Days
Nasal EPITHELIA exposed to 2 ppm - Inhalation - 8 Days
Nasal EPITHELIA exposed to 2 ppm - Inhalation - 19 Days
Nasal EPITHELIA exposed to 6 ppm - Inhalation - 6 Hours
Nasal EPITHELIA exposed to 6 ppm - Inhalation - 24 Hours
Nasal EPITHELIA exposed to 6 ppm - Inhalation - 5 Days
Nasal EPITHELIA exposed to 6 ppm - Inhalation - 8 Days
Nasal EPITHELIA exposed to 6 ppm - Inhalation - 19 Days
Nasal EPITHELIA exposed to 15 ppm - Inhalation - 6 Hours
Nasal EPITHELIA exposed to 400mM - Istillation - 6 Hours
C2C12 - Myoblast cell line
Lung fibroblasts - 1 Hour
Lung fibroblasts - 4 Hours
Lung fibroblasts - 8 Hours
Lung fibroblasts - 12 Hours
Lung fibroblasts - 24 Hours
C2C12 myoblasts
Livers - 48 hours after exposure
primary fetal ASTROCYTES
testicular Sertoli cells - 3 Hours
testicular Sertoli cells - 6 Hours
testicular Sertoli cells - 12 Hours
Testes (prepubertal) - 1 hour
Testes (prepubertal) - 2 Hours
Testes (prepubertal) - 3 Hours
Testes (prepubertal) - 6 Hours
Testes (prepubertal) - 12 Hours
Colonic epithelial cells - 6 Hours
Colonic epithelial cells - 12 Hours
Colonic epithelial cells - 24 Hours
Pancreas (Mist1 knockouts)
Lymphoblastoid cell line (Bleomycin-insensitive)
Lymphoblastoid cell line (Bleomycin-sensitive)
Ramos B-cell lymphoma line - 25 uM
Ramos B-cell lymphoma line - 50 uM
Ramos B-cell lymphoma line
Gallbladders (from leptin-deficient obese females following daily treatment with 5 ug/g recombinant leptin for 4 weeks)
Adult mononuclear cells - 5 ug/ml LPS
Neonatal mononuclear cells (from cord blood incubated) - 5 ug/ml LPS
Myotubes (derived from C2C12 myoblasts) - 1uM
Myotubes (derived from C2C12 myoblasts) - 10uM
Myotubes (derived from C2C12 myoblasts) - 100uM
Myotubes (derived from C2C12 myoblasts) - 1000uM
17.5 day fetal hearts - 1.5ug/kg
17.5 day fetal hearts - 3ug/kg
17.5 day fetal hearts - 6ug/kg
macrophages - 100 ng/ml LPS for 18 hours
Thymus (of ovariectomized C57BL/6) - 2 Days
Thymus (of ovariectomized C57BL/6) - 3 Days
Thymus (of ovariectomized C57BL/6) - 6 Days
Lungs - 0.5 Hours after exposure
Lungs - 1 Hour after exposure
Lungs - 4 Hour after exposure
Lungs - 8 Hour after exposure
Lungs - 12 Hour after exposure
Lungs - 24 Hour after exposure
Lungs - 48 Hour after exposure
Lungs - 72 Hour after exposure
Lung (from C57BL/6J)
Uterus - - single injection of 400 ug/kg - 1 Hour after treatment
Uterus - single injection of 400 ug/kg - 2 Hours after treatment
Uterus - single injection of 400 ug/kg - 4 Hours after treatment
Uterus - single injection of 400 ug/kg - 8 Hours after treatment
Uterus - single injection of 400 ug/kg - 24 Hours after treatment
Uterus - single injection of 400 ug/kg - 48 Hours after treatment
Uterus - single injection of 400 ug/kg - 72 Hours after treatment
Pancreatic islets (from BDC2.5/NOD transgenics) - 200 mg/kg -1 Day after treatment
Pancreatic islets (from BDC2.5/NOD transgenics) - 200 mg/kg - 2 Day after treatment
Pancreatic islets (from BDC2.5/NOD transgenics) - 200 mg/kg - 3 Day after treatment
cranial neural crest - 6 Hours
cranial neural crest - 12 Hours
cranial neural crest - 24 Hours
cranial neural crest - 48 Hours
Bone marrow Sca+ SP hematopoeitic stem cells (HSC) - 1 Day
Bone marrow Sca+ SP hematopoeitic stem cells (HSC) - 2 Day
Bone marrow Sca+ SP hematopoeitic stem cells (HSC) - 3 Day
Bone marrow Sca+ SP hematopoeitic stem cells (HSC) - 6 Day
Bone marrow Sca+ SP hematopoeitic stem cells (HSC) - 10 Day
Bone marrow Sca+ SP hematopoeitic stem cells (HSC) - 30 Day
Livers ( from outbred Wistars - fed a diet with 1% orotic acid) - 1 Day
Livers ( from outbred Wistars - fed a diet with 1% orotic acid) - 3 Day
Livers ( from outbred Wistars - fed a diet with 1% orotic acid) - 14 Day
Livers ( from inbred Kyotos - fed a diet with 1% orotic acid) - 1 Day
Livers ( from inbred Kyotos - fed a diet with 1% orotic acid) - 3 Day
Livers ( from inbred Kyotos - fed a diet with 1% orotic acid) - 14 Day
Whole brain - 5 exposures
Whole brain - 10 exposures
mIMCD-3 - inner medullary collecting duct cell line
Hypothalamus - 1 Hour
Hypothalamus - 3 Hours
Skeletal muscle - 15 minutes
Skeletal muscle - 30 minutes
Skeletal muscle - 45 minutes
Skeletal muscle - 1 Hour
Skeletal muscle - 2 Hour
Skeletal muscle - 4 Hour
Skeletal muscle - 5 Hour
Skeletal muscle - 5.5 Hour
Skeletal muscle - 6 Hour
Skeletal muscle - 7 Hour
Skeletal muscle - 8 Hour
Skeletal muscle - 12 Hour
Skeletal muscle - 18 Hour
Skeletal muscle - 30 Hour
Skeletal muscle - 48 Hour
Skeletal muscle - 72 Hour
Aorta - 7 Days
Aorta - 14 Days
epithelial lung cells
Uterus - 6 Hours
Hepatocytes
DRG neurons - 10 µM for 30 min
T47D breast cancer cells
Blood Myeloid Cells
Embryonic stem cells
CA1 and CA2 embryonic stem cell (ESC)
HESC (CA1 and CA2)
DAOY M2.1 cells
medulloblastoma
HAECT cells - 0 Hour
HAECT - aortic endothelial cell line - 2 Hours
HAECT - aortic endothelial cell line - 6 Hours
HAECT - aortic endothelial cell line - 12 Hours
HAECT - aortic endothelial cell line - 24 Hours
Blood
H1299 cells
RT112 - Bladder cancer cell line - (shRNA 2-4)
RT112 - Bladder cancer cell line (shRNA 4-1)
RT112 - Bladder cancer cell line (shRNA 6-16)
RT112
224 melanoma cell line - 1 Day
224 melanoma cell line - 2 Day
224 melanoma cell line - 3 Day
BL melanoma cells - 1 Day
BL melanoma cells - 2 Day
melanoma 224
BL
224
B cells, unstimulated
b cells, 2 days after LPS + IL4 stimulation
Hela cells
HeLa
Skeletal muscle (gastrocnemius)
Lungs - Heterozygous transgenic
Lungs - Homozygous transgenic
Colorectal adenocarcinoma
Stria vascularis
Lung epithelial cell
CD4+CD25+ Treg
Large Intestine (Distal and Proximal)
CD4+ T effector cells, resting phase
CD4+ T effector cells, 72h after antiCD3 and antiCD28 stimulation
CD4+ CD25hi Tregs
ES (embryonic stems cells)
OSE4 and IOSE80pc ovarian surface epithelial cells
prostate cancer
PC3 and 22RV1
MDA-MB-231
murine embryonic fibroblasts (MEFs)
breast cancer
MDA-MB-231 breast cancer cells
megakaryocytes
Colon, 6 weeks of age
Colon, 12 weeks of age
Colon epithelium, 6 weeks of age
Colon epithelium, 12 weeks of age
Colon, 4 weeks, C57BL/6J
Colon, 4 weeks, C3H/HeJBir
CD71+ bone marrow cells
colon after 5% DSS treatment for induction of IBD mouse model
Colon cancer tumor, CBA/C57BL/6
Heart tissue
Paneth cells (Ileum)
bone-marrow derived macrophages
cardiac muscle
trachea
colon, adenocarcinoma
SK-MEL-2
H157 cells
H157 non-small-cell lung carcinoma cells (Scrambled control, non-targeting siRNA)
MCF10A
MCF10A - immortalized breast epithelial cell line
TF-1
HCC1937
Retina
epithelial cells
4T1.2
MDA-MB-231 cells
Bone marrow derived macrophages (BMDMs)
white adipose tissue
embryonic stem (ES) cell
3T3-F442A adipocytes
Tregs
MEF cells
Retina - Heterozygous null
DU145 prostate cancer cells
HCT116 colon cancer cells
Medullary epithelial cells
Pancreatic islet beta cells
Kidneys - Heterozygous null
Kidneys - Homozygous null
Embryonic fibroblasts - 12 Hours
Embryonic fibroblasts - 24 Hours
HepG2 hepatocellular carcinoma cells
C57BL6/J embryos
Ewing family tumor (EFT) cell line A673
olfactory epithelium
Skeletal muscles
Skeletal muscle - (quadriceps muscles)
MDA-MB-231 human mammary tumor cells
prefrontal cortex
adult cortex
Gastrocnemius muscles (untreated)
Gastrocnemius muscles (cardiotoxin, 3 d)
Gastrocnemius muscles (cardiotoxin, 4 d)
Bone Marrow
brain, hippocampus
Cortex
brain hippocampi, cerebella, and cortices
mature skeletal muscle
U2OS, osteosarcoma cells treated with: dexamethasone (Dex) for 0h
U2OS, osteosarcoma cells, treated with dexamethasone (Dex) for 2h
U2OS, osteosarcoma cells treated with: dexamethasone (Dex) for 4h
U2OS, osteosarcoma cells treated with: dexamethasone (Dex) for 24h
293T cells
hippoccapal tissue postnatal day 10
hippoccapal tissue postnatal day 15
hippoccapal tissue postnatal day 18
hippoccapal tissue postnatal day 20
hippoccapal tissue postnatal day 28
HEK293 kidney cells
J1 embryonic stem cells
F1 embryonic stem cell (ESCs) line
J1 ESC
CD4+CD25hi cells
Regulatory T cells
Bone marrow granulocyte-macrophage progenitors (GMPs)
Pediatric glioblastoma (GBM) tumors
U2OS cells
U2OS
U20S
Mkn28 gastric tubular adenocarcinoma cell line
cell line: Mkn28 cell type: human gastric tubular adenocarcinoma tissue origin: stomach (70 year-old female) overexpressing canonical CDH1
MKN28
striatal cells (HDH Mutant Q111)
spleen
MOLM-13 (mixed lineage leukemia (MLL)-rearranged cell line) - 6 Days
germinal vesicle (GV) oocytes
whole lung
LNCap
LY2 breast cancer cells
Mouse tumors (Myc-induced)
Mammary tumors
Mammary tumors (Myc-induced)
AGS gastric cancer (GC) cell
AGS - gastric adenocarcinoma cells - (63 shRNA Knock-Down)
AGS - gastric adenocarcinoma cells - (65 shRNA Knock-Down)
MCF7
LM2 breast cancer cells
breast
C2C12
U937
myeloid
lung 5 month sham (ambient air) exposure + 1 day Recovery
Lung low smoke exposure 5 months plus 1 day recovery
lung 5 month medium smoke exposure 1 day recovery
Lung 5 month high smoke exposure plus 1 day recovery
Lung 5 month sham (ambient air) exposure + 13 day recovery
lung day 1
lung 1 day medium dose smoke exposure
lung 2 month ambient air
Lung 5 month ambient air
Lung 5 month low smoke exposure
Lung 5 month medium smoke exposure
Lung 5 month high smoke exposure
A431 - EPIDERMOID carcinoma cell line
HCC827 - NON-SMALL CELL LUNG carcinoma cell line
SKBR-3 MAMMARY ADENOCARCINOMA cell line
cerebellum with paraquat exposure
cerebellum paraquat exposed
JoMa1
Ls174T
Analysis of prostate tumors from mutants with prostate-specific Pten loss
striatum 3~10 weeks
cerebellum 3 ~ 10 weeks
small intestine tissue
iPSC
pancreatic tissue
Analysis of ETV6/RUNX1 (E/R) fusion gene-positive in BCP ALL cell lines (REH) following E/R knockdown
DAOY medulloblastoma cells
neural stem cell
c17.2 neural stem cells
embryonic stem (ES) cell lines
trigeminal ganglion
Macrophages extracted from peritoneal cavity of wildtype and mutant (IL4--) mice infected with nematode
mdx mouse muscle
keratinocytes
female embryonic stem cells PGK12.1
male embryonic stem cells WD44
Du145-PCAT1
RWPE-PCAT1
testis
brain, testis, liver, heart
HaCat
KrasG12D pancreatic ductal epithelial cells deficient in PTEN
Analysis of intestinal polyps
vestibular organ, day E18.5
vestibular organ, day P15
vestibular organ, day P90
breast adenocarcinoma
ES cells
CFU-PreB colonies
C57BL/6 mononuclear bone marrow cells
Analysis of hearts
hepatic differentiated from ES cell
BT-474 BREAST CANCER cell line
MDA-MB-231 BREAST CANCER cell line
cancer_cell_lines
BT-474
MCF-7 breast adenocarcinoma cells
pre-iPSCs
embryonic cerebral cortex
mouse immune system
hMSCs
osteoblast differentiation of hMSCs (2 days)
osteoblast differentiation of hMSCs (5 days)
adiposcyte differentiation of hMSCs (2 days)
adiposcyte differentiation of hMSCs (5 days)
hypothalamus
embryonic fibroblasts
embryonic fibroblast
hearts
leukemia stem cells
SNU-398, Hepatocellular carcinoma cell line
esophageal keratinocytes EPC2-hTERT
primary erythroid progenitor cells
HUES6
human pluripotent cells
Immortalized Human Neural Stem Cell Line HB1.F3
LSK cells
Lin- Rosa26rtTA cells
primary myoblasts
HB-1 cells
castrate-resistant prostate cancer (xenografts)
memory B cells
OCI-Ly10
NCI-H716
adipocyte
F424a adipocytes
whole brain
anxiety disorders
posterior second heart field, day E9.5
retinas isolated from E14.5 mice
embryonic fibroblasts, day E13.5
T-HSC (long-term hematopoietic stem cells)
Mammary gland tumors
embryonic pancreas, day E14.5
bone marrow derived mast cells (BMMCs)
melanocytes
Bone marrow progenitors (c-Kit +)
heart left ventricle
sorted Ter119+CD71+ bone marrow cells
Eed KO J1 ESCs on day 0
Eed KO J1 ESCs on day 3
Eed KO J1 ESCs on day 7
Eed KO E14 ESCs on day 0 (undifferentiated)
Eed KO J1 ESCs on day 3 EB differentiation
Eed KO J1 ESCs on day 7 EB differentiation
MCF10A mammary epithelial cells (MECs)
FACS purified YFP+ muscle stem cells
terminal end buds
PGC
MLL-AF9 AML cell line 10980
Analysis of c-Kit+Sca-1+Lin- hematopoietic stem cells (HSCs)
Analysis of triceps muscles
Clear-cell renal cell carcinoma tumor (VHL inactivated)
ccRCC primary tumors
Sciatic nerves
whole embryo
skin (embryonic day 16.5 mouse)
hESC H1
CD9+ trophoblast cells
Sarcoma cell line
Analysis of estrogen receptor α-positive (ERα+) breast tumors
ER+ breast tumor
Skeletal muscle of patients
bone marrow mononuclear cells
splenic B cells
Alveolar type I cells
Analysis of cochleas
B cell
B lymphoid cells
Uterine fibroid tissue
whole heart
bone marrow macrophages (BMMs)
embryonic head tissue
naive P14 antigen-specific CD8+ T cells
3 day in vitro effector CD8+ T cells--Naïve CD8+ T cells (P14 TCR transgenic C57Bl/6) were stimulated with plate-bound anti-CD3 (4 mg/ml, clone 2C11, BD Pharmingen) and anti-CD28 (4 mg/ml, clone 37.51, BD Pharmingen) in the presence of recomb
Peritoneal macrophages
aïve T- cells isolated from spleen were cultured on a-CD3 coated plates with 2.5 mg/ml a-CD28, 20 ng/ml IL-6, 20 ng/ml IL-23, 1 ng/ml hTGFb, 10 mg/ml a-IL4 and 10 mg/ml a-IFNg for 42 hrs
primary hippocampal neuron
skin E17.5
Ileum epithelial cells
Ileum epithelials cells (carcinoma)
Intestinal epithelia
total uterus
Th17 -- Naïve Cd4+ Cd62lhigh Cd44low T cells were sorted using the BD FACSAria cell sorter. Sorted cells were activated with plate bound anti-Cd3 (2μg/ml) and anti-Cd28 (2μg/ml) in the presence of cytokines: 2ng/mL
HeLa, 3 days cultured with 1 ng/mL interferon alpha
HeLa, 4 days cultured with 1 ng/mL interferon alpha
CD45.2+ transplanted bone marrow
Jurkat T cells
Intestinal Epithelial Cells from large intestine
colon epithelial cells
CD4+ T cells (pooled thymus and spleen)
CD4+ or CD8+ T-cells
CD4+ or CD8+ T-cells stimulated with anti-CD3
CD4+ T cells
unstimulated CD3+ T-cells (pooled thymus and spleen)
Xenograft tumors from DU145
Xenograft tumors from NCI-H1650
Xenograft tumors from KPL4
U-87 MG glioma cells
C57BL/6J GFP+ bone marrow cells transduced with viral vector
H441
H441 lung cancer cells
primitive erythroid precursors
NOMO1
breast cancer cells
MDA-MB 231 breast cancer cells
brain (Embryonic day 14)
brain (Postpartum Day 0)
brain (Postpartum Day 14)
ES cells (N2B27 media)
embryonic stem
Q20
Q50
Q91
Q111
ES cells (EB differentiation) 12hs
ES cells (EB differentiation) 24hs
ES cells (EB differentiation) 48hs
D425 medulloblastoma (MB) cells
Extraocular muscle (EOM) - 14 Day
Extraocular muscle (EOM) -28 Day
Extraocular muscle (EOM) - 56 Day
Extraocular muscle (EOM) - 112 Day
corneas
Extraocular muscle (EOM)
Leg muscle
ES cells (EB differentiation)
ES cells (EB differentiation) 3 days
ES cells (EB differentiation) 10 days
Embryoid bodies - 3 Days
Embryoid bodies - 10 Days
tetracycline inducible Ngn3 in the parental Ainv15 embryonic stem cell (ESC) line after differentiation as embryoid bodies (EB) for 3 days
embryonic small intestine
ES cells differentiated into neural progenitor cells
ES cells (Neural differentiation) day 2
ES cells (Neural differentiation) day 3
ES cells (Neural differentiation) day 5
F9
temporal lobe
temporal lobe (129S6 mouse strain)
temporal lobe (strains C57B6 and 129S6 )
lymph node T cells
Spleen CD8 T cells
mammary epithelial cells
strain: 129/Sv tissue: madibular condyle cartilage
fibroblast
ankle joint
H9 hESC derived NSC 3
CD4+ T cells from spleen at 1 month
spleen at 1 month
spleen at 4 month
Hep G2
strain background: 129/SvEv cell type: bone marrow derived dendritic cells (BMDCs) stimulated with: purified tumor-cell derived DNA; Treatment protocol BMDCs were stimulated with tumor-derived DNA using Lipofectamin for 7 hours. Growth protocol Bone marro
bone marrow derived mast cells, ells were sensitized in the medium without IL-3 and SCF supplemeted with IgE (IGEL b4 1 mAB; 1 µg/ml) for 4 hours and then cells were activated with antigen (100 ng/ml TNP-BSA) for 2 hours
bone marrow derived mast cells, cells were sensitized in the medium without IL-3 and SCF supplemeted with IgE (IGEL b4 1 mAB; 1 µg/ml) for 4 hours and then cells were activated with antigen (100 ng/ml TNP-BSA) for 2 hours
ES cells (Neural differentiation) day 16
prostate cancer cell line
Prostate
NSCs
gastrocnemius muscle mdx mutant
Strain: C57BL/6J, Gender: Male, Age: 2 months, Tissue: Gastrocnemius Muscle
Brain frontal lobe
cerebellum from FTLD-U sporadic (without GRN mutation)
frontal lobe brain (control was FTLD-U sporadic)
hippocampus (control FTLD-U sporadic)
whole brain (mutation alpha7 +/T )
whole brain (mutation beta4 -/-)
Primary aortic endothelial cells
liver (6 month)
liver (22 month)
HSC
thymocytes
Analysis of thymic tumors
lumbar spinal cord
BT-20 breast cancer
chondrocyte
pulmonary vascular microendothelial cells (PMVEC)
AML blasts from bone marrow
fibroblast and iPSC
human cell line
CFBE41o-
HEK001
HEK293 embryonic kidney cells
Wildtype embryo fibroblasts (MEFs)
adipose stem cells
Thymocytes (CD4+CD8+ double positive)
GV oocyte
Spinal cord
SV589
hematopoietic stem cells
LN229
Retina - 7 Days
Retina - 10 Days
Retina - 14 Days
Retina - 18 Days
Retina - 21 Days
Retinas
BL2
HeLa, epithelial cells, adenocarcinoma (CCL-2; American Tissue Culture Collection ATCC, Manassas, VA, USA)
HEK293 cells
HEK293 exposed to neocarzinostatin
cell type: preadipocytes tissue: white adipose tissue
human adipose stem cells were transfected with a control siRNA (siCtrl) or siRNA oligos targeting the gene LMO3. 40Hrs later, the transfected human adipose stem cells were induced to differentiate into mature adipocytes with a adipogenic cocktail (FullMix
adult heart
Esophagus cell line OE33
H1299 lung cancer cell line
Lungs of C57BL/6J (B6) - Male
Lungs of BALB/c (BALB) - Male
Lungs of C57BL/6J (B6) - Female
Lungs of BALB/c (BALB) - Female
SNB19 GBM cell line
SF539 GBM cell line
E14.5 fetal liver
E14.5
cell type: umbilical cord endothelial cells (HUVEC) passage: 4
neuroblastoma N1E-115 cells
cell line: MGHU3 cell type: malignant urothelial cells
MGHU3
Y375C
chimeric kidney harvested at day E15.5
cell line: Breast carcinoma cell line Cal51
cell line: Breast carcinoma cell line Cal51, samples were treated with DNA crosslinking reagent mitomycin C (MMC) for 24h prior to harvest
cell type: B-cell cell line: OCI-Ly7 DLBCL
cell type: B-cell cell line: Pfeiffer DLBCL
liver, 24 months
muscle, 5 months
muscle, 24 months
adipose tissue, 5 months
adipose tissue, 24 months
MCF-7 human cell line
naive splenic CD8 T cells
Immortalized AR positive myofibroblast
Immortalized AR positive myofibroblast; 24hr non-specific siRNA, 16hr 10nM DHT treatment replicate 1
cell line: ONS76 cell type: medulloblastoma
cell line: MDA-MB-231 cell type: Breast cancer cells
endothelium
MCF-7 breast adenocarcinoma cells - 4 Hours
prostate cancer cells
prostate cancer cells, 24 hours
prostate cancer cells, 12 hours
cell line: prostate cancer cell line LNCaP
cell line: prostate cancer cell line VCaP
cell line: prostate cancer cell line DU145
cell line: prostate cancer cell line PC-3M
lung adenocarcinomas alveolar epithelia
pancreatic cancer cell line FA6 transiently transfected
pancreatic cancer cell line MiaPaCa2
pre-B cells, day E17.5, C57BL/6 Eµ-Myc
B cells
germinal center B-cells
skin exposed to 6hr UV
skin exposed to 24hr UV
PC12
Jurkat
thyroid
cord blood CD34+ cells
MCF10
embryonic skin
macrophages stimulated with MALP-2
3T3
CD8-IGF1R 3T3
lung following SB inflammatory injury
lung following VILI inflammatory injury
SKM-1 and NOMO-1
Brown adipose tissue
lung epithelial cell line
AALE cells
gastrointestinal stromal tumors
unknown
MMTV-Wnt-1 transgenic mice
unknown cell line stimulated with serum
T47D
ovary
Gastronomicus
MEFs
irradiated MEFs
chronic myelogenous leukemia cell lines KU-812, KCL-22 and JURL-MK1
cytotoxic T-lymphocytes
hepatocellular carcinoma
Estrogen receptor (ER) alpha positive MCF-7 breast cancer cells
HVS transformed CD4+ T cells
HeLa S3
brown adipose tissue of ob/ob mice
DHL6 or DHL4 diffuse large b-cell lymphoma cell line
Panc-1 xenografts
HCT116
HCT116 in low glucose
BaF3
mouse melanoma model
myeloproliferative neoplasm propagating stem cells
Embryonic liver
cord blood cells
CLL
NCI-H1299 or NCI-H2009
H2009
glioma stem cells
SUDHL-1
HCC1954
MOLM14
HL60
Cerebrellum
brain (P7 cerebellum, P30 cerebellum, cerebellar granule cells)
cerebellar granule
mNB-A1 neuroblastoma cell line
MEFs treated with IFNB
fat
young skeletal muscles
tibialis anterior muscle
HUVEC
spindle cell malignant peripheral nerve sheath tumor cells
IMR-32
imr_neuroblastoma
primary hepatocytes
primary hepatocytes, HGF stimulation
Small intestine
liver tissue, n-nitrosodiethylamine treatment
liver tissue, n-nitrosodiethylamine treatment
aorta, diabetic, ApoE KO
aorta, nondiabetic, ApoE KO
embryonic kidney
primary prostate epithelial cells
Preleukemic hematopoietic stem cells
bone marrow stromal cells, TGFb stimulation
embryonic tongue
HEK293T, wnt stimulation
Hepatoma HepG2 cells
HepG2 hepatoma cells - 6 Hours following transduction (with a recombinant adenovirus expressing GPLD1)
HepG2 hepatoma cells - 12 Hours following transduction (with a recombinant adenovirus expressing GPLD1)
Treg cells
CD4+ T cell
CD4+ T cell, TCR stimulated
embryonic stem cells, treated with activin or SB431542
HaCaT keratinocytes
HL-60 acute myeloid leukemia cell line
MOLM-14 myeloid leukemia cell line
THP-1 acute myeloid leukemia cell line
U937 acute myeloid leukemia cell line
HL-60
lung cancer cells
mammary organoids
dendritic cells
caudal vertebral bone
posterior palate
PC3
HEL
rko
nih3t3
HeLa cells - 0.5 Hour by siHSF1_1
HeLa cells - 2 Hour by siHSF1_1
HeLa cells - 4 Hour by siHSF1_1
HeLa cells - 0 Hour by siHSF1_2
HeLa cells - 0.5 Hour by siHSF1_2
HeLa cells - 2 Hour by siHSF1_2
HeLa cells - 4 Hour by siHSF1_2
cn_aml
fetal_liver
RKO_colon_carcinoma
Tcell
mesc_v6.5
E14dot5_neocortex
neonate_P3_lung
2008_ovarian_cancer_cells
primary_monocytes
Mouse_Embryonic_Fibroblast_MEF
heart_left_ventricle
LDL receptor-deficient livers
MCFdash7
erythroblast
P15_lung
cd4pos_cd8pos_thymocytes_thymus
LINnegFLT3posCD127posLY6Dneg_bone_marrow
mouse_embryonic_stem_cell
U2OS_osteosarcoma
92dot1
adrenocortical_adenomas
splenic_CD11bplusGrdash1_Hdash2b_gen_background
Double_Pos_TCRAhomoneg_thymocytes
Embryonic fibroblasts (MEFs) - 0 hour
Embryonic fibroblasts (MEFs) - 2h
Embryonic fibroblasts (MEFs) - 6h
Embryonic fibroblasts (MEFs) - 24h
Embryonic fibroblasts (MEFs) - 48h
liver_1yo
megakaryocytic_L8057
MCF7 cells were transfected with control or cyclin D1 siRNA. Cells were maintained for 48hrs to allow for efficient knock-down. Vehicle treated cells were maintained for a further 24 hrs and then processed.
MCF7 cells were transfected with control or cyclin D1 siRNA. Cells were maintained for 48hrs to allow for efficient knock-down. Estradiol treated cells were maintained for a further 24 hrs and then processed.
ES cells derived neural projenitor cells
ES cells derived neural projenitor cells (day 7)
HTH83 Anaplastic thyroid carcinoma
TL3 Anaplastic thyroid carcinoma
cell line: MDA-MB-231 breast cancer cell line
cell line: A549 cell type: Lung adenocarcinoma
cell line: TOV112D cell type: Ovarian cancer cell line
cell line: ES2 cell type: Ovarian cancer cell line
B cell lymphocytes
cell line: HeLa cell type: human Cervical Carcinoma genotype/variation: parental
MCF7 human breast cancer cell line
MCF7 + estrogen
cell culture: grade VI GBM short term cultures IN1472
cell culture: grade VI GBM short term cultures IN1760
tissue resident peritoneal macrophages
Pituitary gland
Fetal pituitary glands from embryonic day 17.5
Human prostate cancer cells M12
Heptaocellular carcinoma cell line HepG2
Heptaocellular carcinoma cell line HepG2 cells were infected with S. aureus 8325-4 (MOI: 20) for four hours (5 % CO2, 96 % humidity and 37 °C)
cell line: Y79 cell type: Retinoblastoma
cell type: HeLa
H1299, 12 h post GAPDH siRNA
H1299, 12 h post GAPDH siRNA (lipofection)
H1299, 24 h post GAPDH siRNA
H1299, 24 h post GAPDH siRNA (lipofection)
4A3 and 1D3
non-small cell lung cancer nodules
LKR13
liver tumor tissue
C57BL/6 SLC6A4 */-
lung epithelial cells
mammary duct epithelial cells
fibroblasts (bj-fib_2 and HGPS-fib_2)
iPSC (BJ-iPSC_2 and HGPS-iPSC_2)
Limb bud
Skin fibroblast
Striatum - 6 weeks
Striatum - 12 weeks
Striatum- 24 weeks
Striatum - 18 months
Midbrain - 6 weeks
Midbrain - 12 weeks
Midbrain - 24 weeks
Midbrain - 18 months
Cerebellum - 6 weeks
Cerebellum -12 weeks
Cerebellum - 24 weeks
Cerebellum - 18 months
Liver - 6 weeks
Liver - 12 weeks
Liver - 24 weeks
Coronary smooth muscle cell
Brown fat cell
Cerebellum - S25 mice (3 Months)
Cerebellum - S46 mice (3.5 Month)
Cerebellum - S46 (10 month)
Cerebellum- X50 mice (16 months)
Cerebellum - A39 Mice (4 months)
Cerebellum - A39 Mice (10 months)
Cerebellum - A61 Mice (8 months)
OT-I T cells from tumors
OT-I T cells from spleen
clone type: AtT20 clone mouse pituitary gland cells
72 hours after transduction with MSCV-IRES-GFP, gfp positive bone marrow cells were sorted and RNA isolated from FVB 129 mice
cell: Cultured oligodendrocytes genotype: Myelin-gene Regulatory Factor conditional knockout (MRF fl/fl, Olig2 wt/cre)
ventral prostate
early progenitors with lymphoid and myeloid developmental potential (EPLM) cells Strain: B6CF1 x C57BL/6, Tissue: Bone marrow, Age: 7 weeks
Large PreB cells Strain: B6CF1 x C57BL/6, Tissue: Bone marrow, Age: 7 weeks
Foxp3+ CD25+
dorsal prostate, PTEN-null background
anterior prostate tumor
Inner ear
mammary fibroblasts
LNCaP cells treated with ethanol
LNCaP cells treated with R1881
mammary glands
cell line: OVCAR3 transfection: eukaryotic expression vector pcDNA3.1
source tissue: umbilical cord blood cell type: CD34+/CD38- Lin- cells
Flp-Inâ???????¢ 293 T-Rex
Human lung adenocarcinoma cell line CL1-0
cell line: Hep3B
SK-BR-3 breast cancer cells, TFPI alpha isoform
SK-BR-3 breast cancer cells, TFPI beta isoform
cell line: HSC-3 cell type: human tongue squamous cell carcinoma
cell line: HTB-58 gender: male age: 65 years race: Caucasian disease: squamous cell carcinoma of the lung sirna: anti-Evi1
cell line: TF-1 gender: male age: 35 years disease: erythroleukemia (AML M6) siRNA Evi1
Inducible stable HEK 293 Flp-In T-REx Ero1alpha-WT cells, expression induced with doxycycline for 24 h
Inducible stable HEK 293 Flp-In T-REx cells overexpressing a hyperactive mutant (C104A/C131A) of Ero1α, expression induced with doxycycline for 24 h
human epithelial colorectal adenocarcinoma cells (Caco-2)
cell line: Flp-Inâ???????¢ T-RExâ???????¢ HEK293 cells transgene: NPAP1/C15orf2, doxycycline induced
A375 melanoma cell-line
M24met melanoma cell-line
glioma cell line U373, DTX1 over-expressing (Myc-tagged)
glioma cell line U373, MAML1 dominant-negative
cochlea at P3
cochlea at P7
cochlea at P13
cochlea at P60
eyes at E10.5
eyes at E12.5
eyes at E16.5
eyes at P8
eyes at P60
primary mouse microglia
MCF10A breast epithelial cells
strain/background: C57BL/6 genotype/variation: Zbtb7a Flox/Flox Mx1-Cre+ (LRF homozygous knockout) age: 4 weeks cell type: FACS-sorted LT-HSCs (LSK IL7Ra-Flt3-CD150+CD48-) time point: 9 days after 1st pIpC injection Treatment protocol LT-HSCs were FACS-so
P1 mouse eyeball genotype/variation: Snf2h lens-conditional knockout strain: C57BL/6 age: newborn
P1 mouse eyeball Brg1 lens-conditional knockout genotype/variation: Brg1_cKO1 strain: mixed background (Gebuhr TC, Kovalev GI, Bultman S, Godfrey V, Su L, Magnuson T. The role of Brg1, a catalytic subunit of mammalian chromatin-remodeling complexes, in T
Nrl-/- retina ( NRL - neural retinal leucine zipper - NULL Retinas)
Dendritic cells (DCs)
genetic background: 129/SVE tissue: tibialis anterior age: 7-9 wk treatment: 50 eccentric contractions 12 hours
genetic background: 129/SVE tissue: tibialis anterior age: 12-14 mo (aged) treatment: 50 eccentric contractions 12 hours
bone marrow-derived mast cells
Colons from genotype: Villin-Cre + OR Cre- / Runx1-floxed strain: C57BL/6 background
tissue: liver (SHP uncertain if it is NR0B2 or PTPN6)
HEK293E
T cells from 5C.C7 RAG2-/- CD45.1 and 5C.C7 RAG2-/- CD45.1 CTLA-4-/- mice were activated by immunization with MCC peptide and LPS and after 4 days sorted for RNA extraction.
Neural stem/ progenitor cells
genotype/variation: Cyp27b1 flox/flox;Cre+ OR Cre- tissue: breast tumor genetic background: FVB
thymic natural killer cells
tissue: uterine age: 15 days background: C57BL/6J;129S5/Brd mixed hybrid genotype/variation: Cre knockout of Dicer OR control
background strain: B6/129 tissue: Liver age: 2 Month
background strain: B6/129, tissue: liver/tumor
Lung tissue
tumor-associated granulocytes (CD11b+Gr1+)
tumor-associated monocytic cells (CD11b+Gr1-)
heart atrium
neuroblastoma cell line
cell type: human neuroblastoma cells cell line: SH-SY5Y clone: B
cell type: human neuroblastoma cells cell line: SH-SY5Y
SH-SY5Y
brain, motor cortex, fast spiking interneurons
brain, motor cortex, layer 5 thick tufted pyramidal neurons
brain, locus coeruleus neurons
brain, cerebellum, Purkinje cells
brain, locus coeruleus neurons, young time point
liver, female
liver, male
rectal mucosal epithelia
pre-frontal cortex
Caudate-Putamen
NIH3T3 cells - 4 Hours
extensor digitorum longus
PPC1 prostate cancer cell line infected with lentivirus
cell line: HCT116 Human colon cancer shRNA expressing: NFX1-91
HeLa cell line
Hematopoietic stem and progenitor cells (LineageLow, Sca1+, Kit+; LSK)
cell line: Reh malignancy: non-Hodgkin lymphoma
Non-Hodgkin's lymphoma Reh cells
Macrophages stimulated for 100 minutes with IL-6
Macrophages stimulated for 400 minutes with IL-6
MCF-10A mammary epithelial cell line
anterior tibialis
medial gastrocnemius
PC-3
ventricular myocardium
Superior Frontal Gyrus
retina, cone photoreceptors
retina, cone photoreceptors, postnatal day 40
retina, cone photoreceptors, postnatal day 50
retina, cone photoreceptors, postnatal day 60
retina, cone photoreceptors, postnatal day 90
naïve CD4+ T cells
cerebellum, 10d
cerebellum, 20d
cerebrum, 0d
cerebrum, 10d
cerebrum, 20d
cerebellum, 0d
cerebellum, 4w
cerebellum, 12w
cerebellum, 18w
cerebrum, 4w
cerebrum, 12w
uterine fibroid and Myometrium
ventromedial hypothalamus
Huh-7 human hepatoma cells
epididymal fat
white adipose tissue, regular chow diet
white adipose tissue, high fat diet
testes
testes, 49d
mandibular molars
embryo forelimbs
whole uterine tissues
Differentiating glioblastoma-initiating cells
neocortex, male
neocortex, female
Pancreatic islets
Embryonic Cardiac Progenitors
CD4+/8+ cells
R1 embryonic stem cell line
MLE15
Brown Preadipocytes
Colo-205
primary p53-null neural stem cells
DN4 thymocytes
CD8+ T cells
adrenal gland
isolated keratinocytes from mouse skin
Huh-7 hepatocellular carcinoma cell line transduced with lentivirus. GFP+ cells were sorted by fluorescence-activated cell sorting (FACS) analysis
cell type: nasopharyngeal carcinoma (NPC) 5-8F cells
strain: C57BL/6J cell type: bone marrow, c-Kit+Lin-Sca-1+ (KLS)
strain: C57BL/6J, cell type: bone marrow, megakaryocyte-erythrocyte progenitors (MEP)
CUTLL1 (T-lymphoblastic leukemia) cell line
CUTLL1 MigR1 transduced (T-lymphoblastic leukemia) cell line
CUTLL1 DN-MAML transduced (T-lymphoblastic leukemia) cell line
T-ALL (Leukemia cell line)
CEM (leukemia cell line)
KOPT-K (Leukemia cell line)
DND41 (Leukemia cell line)
HPB-ALL (Leukemia cell line)
Cerebellum tissue - 4 weeks of age
Cerebellum tissue - 12 weeks of age
Forebrain tissue - 4 weeks of age
Forebrain tissue - 12 weeks of age
Regulatory T cells (Treg)
BxPC3 pancreatic adenocarcinoma cells
Osteoclasts
Tissue: Spleen Type: Saline Strain: C57BL/6
Tissue: Spleen Type: sham laparotomy Strain: C57BL/6
Tissue: Spleen Type:6 hours after cecal ligation and puncture (CLP) Strain: C57BL/6
Tissue: Spleen Type: 6 hours after tracheal instillation of Pseudomonas aeruginosa Strain: C57BL/6
HUVEC (Human umbilical vein endothelial cells)
glioma cells
MEFs (Mouse embryonic fibroblasts)
murine kidney, cystic epithelial tissue
isolated E17.5 mouse skin
pancreatic ductal adenocarcinoma cell line CAPAN2
Schwann cells
Primary neonatal keratinocytes
BASC cells
HCT116 cells
HUVEC cells
mOS-482 cells
N2A cells
Photoreceptors cells of retinas at E16
Photoreceptors cells of retinas at P2
Photoreceptors cells of retinas at P6
Photoreceptors cells of retinas at P10
Photoreceptors cells of retinas at 4 weeks
Mepenzolate bromide effect on lung
HuT-102 cells
Cerebral microvascular fragments
Myoblast
Fetal liver
megacariocytes
megacariocyte progenitors
Ileum
B-Cells
Liver from male 3 month old
TER119+ erythroblast cells
TER119- progenitor cells
retina (postnatal day 6)
retina (postnatal day 8)
peripheral blood from 8-10 E12.5 embryos
epididymal white adipose tissue
apical segments of organ of Corti from cochleae
combined basal segments of organ of Corti from cochleae
testicle
Hec50co
SY5Y
Rheumatoid arthritic synovium
OvCa clear cell
forebrain
brain (subpallium, Pou3f-expressing cells)
Pre-B ALL cells
cardiac tissue harvested 4-7 days post overexpression induction
cardiac tissue harvested 2-4 weeks post overexpression induction
dorsal skin basal interfollicular epidermal stem cells
cardiomyocytes
Medullary thymic epithelial cells (with low CD80 expression)
Medullary thymic epithelial cells (with high CD80 expression)
U2OS osteosarcoma cells
gallbladder
lymphoid tumors
Lymph nodes
U33 cells
COV434 cells
KGN
P28 testis tissue
Mouse embryonic fibroblasts
MEF
placenta
epithelium
HT144
A2058
WM-266-4
NZM15
spleen CD8 Dendritic Cells
spleen CD11b Dendritic cells
KARPAS-231
Embryos at E8.5
Embryos at E12
Hematopeotic cells
bone-marrow derived dendritic cells
neurons
T follicular helper cells
spleen B cells
bone marrow derived macrophage
HapMap lymphoblastoid cell line
CD4+CD62L- resting T cells
brain (striatum)
Olfactory bulb of 23 day old
Olfactory bulb of 4 month old
spleen Ter19+CD71
muscle, quadriceps
Splenic B-cells
thymus
spleen naive CD8 T cells
spleen activated CD8 T cells
Schwannoma cell line. NB: This is actually a rat dataset, but I "chose" mouse because mouse is more similar to rats than man and there was no drop down option for Rattus norvegicus.
U87MG cells
hematopoietic stem and progenitor cells
HCT-116
peritoneal neutrophils
1833
endometrial stromal cells
LNCaP+R1881
PDCs
A375P
A375P melanoma cells
LNCaP-abl
Myeloma cells
Human hepatocellular liver carcinoma cells (HepG2)
Huh7
MCF-7 breast tumor cell line
siRNA treated MCF-7 breast carcinoma cell line
primary murine fibroblast-like synoviocytes (FLS)
uterus
mammary gland luminal epithelial cells
ear (otic vesicle)
Otic vesicle derived 2B1 cells
E10 embryos
E10.5 embryos otic vesicle
liver (after high fat diet for 8 weeks)
HT1080
ARPE19
murine lung tissue
liver (8 months)
liver (3 months)
PMSCs
SCC-40
SCC-2 squamous cell carcinoma cells
A549 lung carcinoma cells
MDA-MB-231 breast adenocarcinoma cells
Caco-2 cells (siRNA1 knockdown)
Caco-2 cells (siRNA2 knockdown)
MZ1774 human ccRCC cell line
MCF-7 breast adenocarcinoma cell line
NSCLC (non-samll cell lung cancer) H1993 cells
peritumoral tissues (having hepatocellular carcinoma)
Liver tumoral tissue (having hepatocellular carcinoma)
bronchial muscle cells
Spleen cells
Analysis of blood monocytes differentiated to macrophages (MP)
Analysis of HUVECs
2102Ep human embryonal carcinoma cell line
NTera-2 human embryonal carcinoma cell line
Prostate luminal epithelial cells
A549 lung adenocarcinoma cell line
tissue-specific / cerebellum
Human Umbilical Vein Endothelial Cells (HUVEC) infected by retroviral vectors bearing a control scramble or pre-miR-210 sequence
Human Umbilical Vein Endothelial Cells (HUVEC) transfected with Locked Nucleic Acid (LNA) oligonucleotides against miR-210 or a control scramble sequence
cell line: HEK293T
Ramos cells; cell type: human Burkitt lymphoma; dsmz no.: ACC 603 origin: established from the ascitic fluid of a 3-year-old boy with American-type Burkitt lymphoma in 1972; cells were described to be EBV-negative but EBV infectible, to carry the (8;14) t
HEK293 cells were transfected 72h with siRNA BAHD1 or siRNA control
OCUBM cells, mammary gland Breast Cancer
Esophagus
DN2 thymocyte
BxPC3 pancreatic ductal adenocarcinoma cell line
CCIT human embryonic carcinoma cells
Papilloma tumour epithelial cells
NTERA2/D1 human embryonal carcinoma cells
Preovulatory granulosa cell
Embrios
Heart (left ventricles)
Spleen (marginal zone B)
Spleen (folicular B)
Mammary stroma
Brains from E18.5 embryos
myeloid-derived suppressor cell from bone marrow
myeloid-derived suppressor cell from colon tumor
LSK cell population (FACS sorted from bone marrow)
Liver (21 day old mice)
Testis (mice 2-3 months old)
MEF (circadian time point CT18)
MEF (circadian time point CT30)
CD8 memory T-cell
Kidneys
Hematopoietic stem cells (Cd150+, Cd48-, Lin-, Sca+, c-kit+)
Dorsal skin ( E18.5 mouse embryos )
bone marrow derived macrophages (not activated)
3T3-L1 preadipocytes - 48h
3T3-L1 preadipocytes
Retinas of R7E
SKM-Tg - Skeletal muscle
Skeletal muscle - SKM-KO
Quadriceps muscle
SBC-5
CL1-0
H69
Calu-3 airway epithelial cells
mESC mouse embryonic stem cells
Primary endothelial cells passage 7
Primary endothelial cells passage 11 (senescent cells)
osteoblasts (7 days)
Colorectal
SW480 KRAS-mutant colorectal cancer cell line - 4hours
SW480 KRAS-mutant colorectal cancer cell line - 16hours
mesenchymal cells
heart (3-week-old mice)
heart (12-week-old mice)
Analysis of PBMCs from patients with clinically isolated syndrome suggestive of multiple sclerosis (CIS)
Esophageal epithelial cells from eosinophilic esophagitis patients
heart (10 weeks old mice)
Pineal gland
Embryonic palatal mesenchymal cells
small intestine (jejunum) epithelium
Follicular B cells
Transcriptional 2 Follicular Progenitor
distal retinal progenitor cells
brain (telencephalon)
yolk sac (E9.5)
Analysis of resected liver from hepatocellular carcinoma (HCC) patients with chronic hepatitis C (CHC)
IL-28B
E14 embryonic stem cells (ESCs)
Renal mesangial cells
Microvascular endothelial cells
Macrovascular umbilical vein endothelial cells
Livers of 3 month old
Livers of 12 month old
Oocytes
Embryos
posterior embryonic brain
anterior embryonic brain
hematopoietic stem cell
LSK - bone marrow progenitor population
CMP - bone marrow progenitor population
GMP - bone marrow progenitor population
SHEP-SF neuroblastoma
multiple cell types
embryonic renal vesicles
brain striatum
Aged gastrocnemius muscle - 10 weeks
Aged gastrocnemius muscle - 24 months
SUM149
MDA-MB231
AZ-521 gastric cancer (GC) cell line - 8 Hours
AZ-521 gastric cancer (GC) cell line - 12 Hours
AZ-521 gastric cancer (GC) cell line - 18 Hours
AZ-521 gastric cancer (GC) cell line - 24 Hours
Retinas of C57BL/6J
Z138 mantle cell lymphoma (MCL) cells
MEF fibroblast cell line
Adult heart during pressure overload
LNCaP prostate cancer cell
E16 primary cortical neuron cultures
neuron
SW480 - Colorectal cancer cell line
Naïve CD4 T cells
Naïve CD8 T cells
Testis from 14 day old
Testis from 17 day old
Embryonic palatal tissue
Embryonic kidney from E12.5 embryos (β-catGOF-UB mutant)
E11.5 XX embryonic gonads
E11.5 XY embryonic gonads
Developing hippocampus from FVB newborns (4.5-day-old)
Developing hippocampus from adults (3-mo-old)
Heart from C57BL/6 males
CD4+CD25+ T-regulatory cells
Foxp3(+) Tregs
C57BL/C pancreas
AMuLV (pro-B Abelson leukemia virus transformed) cell line
AF9 - Mixed Lineage Leukemia (MLL) cells - 3 days
AF9 - Mixed Lineage Leukemia (MLL) cells - 5 days
AF9 - Mixed Lineage Leukemia (MLL) cells - 7 days
Cerebellum - 6 month
Striatum - 6 months
Cerebellum - 21 month
Striatum - 21 month
HMEC-TR mammary epithelial cell line
MDA-MB-231 breast cancer cells (depleted of MUTANT-p53)
MCF7 estrogen-sensitive breast cancer cells
lung (E18.5)
MCF7 breast cancer cells
MCF7 breast cancer cells (fulvestrant-resistant)
MLL leukemia cells
WAT - white adipose tissue (stromal-vascular cells)
Ewing sarcoma and prostate cancer
Raji cells (B lymphocytes)
Isolated hepatocytes
LSK
T reg
Testis - 7 Days
Testis - 14 Days
Testis - 21 Days
Testis - 28 Days
Immortalized embryonic fibroblasts
gonadal white adipose tissue HFD
White adipose tissue (WAT)
Primary preadipocyte cultures
Livers
Endothelial-derived cells
Yolk sac from E9 embryos
Yolk sac from E10.5 embryos
whole lung tissue
Lens epithelium
Retina - 30 Days (POST-NATAL)
Retina - 42 Days (POST-NATAL)
heart - 6 week old
A431
L428
L428-PAX5
UM-UC-3 bladder carcinoma cells
Brown adipose tissues
Bone marrow pre-BII cells
thymic epithelial cells
C3H10T1/2 fibroblast cell line
Embryonic placentas (12.5 day)
fibroblasts fron neonatal foreskin
HeLa cervical cancer cell line
Whisker pads
Hind limb skeletal muscle (4-week old dy3K/dy3K animals)
Spontaneously immortalized embryonic fibroblasts (EFs)
Palatal shelves (E14.5 embryos - palate)
Skeletal muscle - Soleus
Skeletal muscle - Tibialis anterior
Embryonic urogenital epithelium - day 10.5
Embryonic heart (day 12.5 C57Bl/6)
Pineal glands of neonates
adenoid cystic carcinoma derived cells ACC3
Cardiac muscles from 8-week (mdx animals)
Cardiac muscles from 10.5-month (mdx animals)
Panc-1 cells
Prostate epithelium
Basal Breast Cancer Cells
Intestinal crypts
Retinas - 2 days
Retinas - 10 days
Retinas - 2 months
T-cell line
Hair follicles
Fetal heart - Heterozygous null mutant
Fetal heart - Homozygous null mutant
Embryonic brains (at E18)
Postnatal brains (at P16)
Embryonic livers (day 12.5)
Jejuna - intestine
IMR-32 neuroblastoma cells
K562 myeloid leukemia cell line
Embryonic heart
MCF-10A
KM-H2
Heart - 2 week old
Heart - 4 week old
E9 embryos - Heterozygous mutant
heart (8 wk)
Skin (8-9 wk)
Endothelial cells
Heart ventricles (of GATA4 animals heterozygous)
NB4 cells
NB4 cells, 72h ATRA-induced differentiation
Embryos (maternally depleted)
Brown adipocyte
lung (type II cells)
skeletal muscle (6 mo)
Diaphragm (from dystrophia muscularis -dy/dy- mouse model)
Embryonic kidneys (from day E14.5)
Embryonic kidneys (from day E18.5)
brain (fourth ventricular choroid plexus, E13)
Livers (from C57BL/6 adult males)
Skin - 0 Day
Skin - 1 Day
Skin - 7 Day
heart (E10.5)
SW480
U97 cells
pancreas (islets, PDX1-expressing cells)
KMH2 cells
MDA-LM2-shTARBP2
human oropharyngea carcinoma KB cells
U251 glioblastoma cells
U87MG
PC3 cell line
cell line MDA-MB-231
MDA-231 cell-line
neuronally differentiated cells (SK-N-SH)
cardiac and skeletal muscle
heart treated with pseudoephedrine
embryonic (e11.5) proximal hindlimb bud tissues
Spinal Cord Motor Neurons 60 days
Spinal Cord Motor Neurons 120 day
type II alveolar cells
Neonatal cardiomyocytes
Embryonic fibroblasts - 0 DAY
Embryonic fibroblasts - 2 DAYS
Embryonic fibroblasts - 4 DAYS
Embryonic fibroblasts - 10 DAYS
Embryonic fibroblast - 0 Day
Embryonic fibroblast - 2 Day
Embryonic fibroblast - 4 Days
Embryonic fibroblast - 10 Days
Cardiac muscles (SJL/J animals)
Skeletal muscles (SJL/J animals)
Quadriceps femoris
Tibialis anterior
MOLT4 (T-cell acute lymphoblast leukemia) cells
medullary thymic epithelial cells
A375 melanoma cells
prostate epithelial cells
oculomotor neurons 10 week
Spinal Cord 10 week
ME180 cervical carcinoma cells
Hippocampi
Skeletal muscle (C57BL/6)
Lungs (18.5 days post coitum)
Lungs (at birth)
Diaphragm (mdx mice)
Extensor digitorum longus (mdx mice)
Gastroc (mdx mice)
Quadriceps (mdx mice)
Soleus ( mdx mice)
Tibialis anterior (mdx mice)
Diaphragm (mdx5cv mice)
Extensor digitorum longus (mdx5cv mice)
Gastroc (mdx5cv mice)
Quadriceps (mdx5cv mice)
Soleus (mdx5cv mice)
Tibialis anterior (mdx5cv mice)
mature regulatory T cells (Treg)
Hindlimb muscle - 7 Days
Hindlimb muscle - 14 Days
Hindlimb muscle - 23 Days
Hindlimb muscle - 28 Days
Hindlimb muscle - 56 Days
Hindlimb muscle - 112 Days
RUES2
Diaphram - 7 Day
Diaphram - 14 Days
Diaphram - 23 Days
Diaphram - 28 Days
Diaphram - 56 Days
Diaphram - 112 Days
hearth tissue
lymphoma cells, untreated
lympoma cells treated 2h with a cAMP analog, selective for PKA
lympoma cells treated 6h with a cAMP analog, selective for PKA
lympoma cells treated 24h with a cAMP analog, selective for PKA
sciatic nerve, at PND 60
isolated parietal cells (stomach)
HUVEC (umbilical vein endothelial cells)
Intestine
germ cells
SKMEL-2 melanoma cells
Heart left ventricles above LAD artery (AMI -induced by left coronary artery ligation) - 24 Hours
Heart left ventricles above LAD artery (AMI -induced by left coronary artery ligation) - 48 Hours
Heart left ventricles above LAD artery (AMI -induced by left coronary artery ligation) - 1 Week
Heart left ventricles above LAD artery (AMI -induced by left coronary artery ligation) - 8 Weeks
Spinal cord grey matter - sporadic ALS
CNS - Spinal Cord (MMHCC)
Muscle tissue
Cirrhotic Livers and Normal Kidneys from the same patients
Muscle - Striated (Skeletal) (MMHCC)
peripheral blood lymphocytes
blood lymphocytes
nasal olfactory stem cells
dental pulp cells
induced pluripotent stem cells
temporal cortex
whole blood cells
CNS - Brain - Cerebellum (MMHCC)
neural precursor cells
mesodermal precursor cells
amniotic fluid
Substantia nigra - Braak α-synuclein stage 1-2
Substantia nigra - Braak α-synuclein stage 3-4
Substantia nigra - Braak α-synuclein stage 5-6
Breast epithelium
CD4+ T cells - European-American SLE patients
CD8+ T cells - African-American SLE patients
CD8+ T cells - European-American SLE patients
CD20+ B cells - European-American SLE patients
Dorsal motor nucleus of Vagus nerve
PD medullas
ION (inferior olivary nucleus)
Endothelial cell
Mammary Epithelium
Synovial Membrane
CNS - Brain - Hippocampus (MMHCC)
Mononuclear Leukocyte
Myocardial tissue
CNS - Brain (MMHCC)
Epidermis
Pleura
Intestinal Epithelium
T lymphocyte
Intestine - Small Intestine - Duodenum (MMHCC)
Intestine - Large Intestine - Colon (MMHCC)
macrophage
Leukocyte - Lymphocyte - B-Lymphocyte - Plasma Cell (MMHCC)
Dorsal Root Ganglia
Leukocyte - Monocyte - Macrophage (MMHCC)
Normal prostate epithelial cells and Primary epithelial cell culture (Gleason 6 score tumor)
Normal prostate epithelial cells and Primary epithelial cell culture (Gleason 7 score tumor)
Amygdala
Nucleus Accumbens
CNS - Brain - Hypothalamus (MMHCC)
Mammary Gland Tissue
Endometrium
Splenocyte
Testicular Tissue
Muscle - Striated (Skeletal) - Diaphragm (MMHCC)
Uterus - Myometrium (MMHCC)
Tibialis Muscle
Extensor digitorum longus muscle
Skeletal muscle - Tibialis Anterior - 7 months
Skeletal muscle - Tibialis Anterior - 10 months
Skeletal muscle - Gastrocnemius - 7 months
Skeletal muscle - Plantaris - 7 months
Skeletal muscle - Diaphragm - 10 months
Skeletal muscle - Extensor digitorum longus - 7 months
Blood monocyte
Esophageal Tissue
Esophagus epithelium
Peripheral blood mononuclear cell
Whole blood
Renal Tissue
Splenic Tissue
Thymic epithelial cell
Dental Pulp
Gingiva
Lymphocyte
Penis, NOS
Colon biopsy
Hepatic Tissue
Alveolar Macrophage
Hyaff-11 scaffold culture
chondrocytes monolayer culture
Soleus Muscle
pancreatic islet
Cerebral cortex
Bone marrow stem cell
CD34+ cells (refractory anemia)
CD34+ cells (refractory anemia with ringed sideroblasts)
CD34+ cells (refractory anemia with excess blasts)
Skin tissue
Leukemic Cell
Eye - Lacrimal Gland (MMHCC)
Urothelium
Aorta Smooth Muscle Tissue
Sections from non-Basal Like Cancer specimens
Sections from sporadic, primary Basal Like Cancer specimens
Femur
Megakaryocyte
Bronchial epithelium
Optic Disk
Tonsillar Lymphoid Tissue
Sigmoid colon
sigmoid colons (mucosal biopsy)
Integument
Connective Tissue
Trabecular Meshwork
Leukocyte
Endocrine Pancreas - Islet Cell of Langerhans - Beta Cell (MMHCC)
Oropharynx Epithelium
Sebocyte
Extraocular muscle
Bladder Tissue
Gastric Tissue
Thyroid Gland (MMHCC)
Hepatocyte
Fetus
Epithelial Cell
Nose
Ganglioneuroblastoma
Biopsy
thymocytes (Ikaros mutant thymic tumors)
Umbilical vein
Non-lesional (NL) Skin - (Uninvolved samples)
Normal skin and squamous cell carcinoma (SCC) tumor biopsies
cardiomyocyte
Blood neutrophil
B Cell Lymphocyte
Spleen (MMHCC)
Dendritic cell
Endometrial specimens from women with endometriosis - Proliferative
Endometrial specimens from women with endometriosis - Early Secretory
Endometrial specimens from women with endometriosis - Mid Secretory
Haematopoietic stem cell
Adrenal Gland Tissue
Uterus - Cervix (MMHCC)
Skeletal Myocyte
Thrombocyte
Astrocyte
CD3+ T cells
endothelial cells and neurons from dorsolateral prefrontal cortex
Endothelial cells - male
Neurons - male
Neurons - female
Esopahgus endoscopic biopsies
Colonic mucosa - Inflamed
Colonic mucosa - Non-Inflamed
CD34+ hematopoietic stem and progenitor cells from the bone marrow of untreated patients
Hypothalmus
Head and Neck Squamous Cell (Normal vs. Tumor)
hematopoietic CD34+ stem cells
whole blood, female
bronchial epithelial cells
Female bronchial epithelial cell
Male bronchial epithelial cell
Bronchial epithelial cells - Female - Mild asthma
Bronchial epithelial cells - Female - Severe asthma
Bronchial epithelial cells - Male - Mild asthma
Bronchial epithelial cells - Male - Severe asthma
Stromal cells
endometrial cells
endometrial tissue
brain tissue
Tendons
mast cells
MDA-MB231 cells
embryonic tissue
platelets
Optic nerve head
OVE26 type 1
Huh-7
primary lung bronchial epithelial cells
osteoblastic lineage cells
HT29 Colo205
gracilis and semitendinosus muscle
Skeletal muscle - Gracilis muscle biopsies
Skeletal muscle - Semitendinosus muscle biopsies
peripheral blood
Carotid artery
derma (skin)
Skin (LESIONAL atopic dermatitis (AL) skin lesions)
salivary tissue
synovial biopsies from affected knees
cultured cerebellar granule cells, Cystatin B knockout model of progressive myoclonus epilepsy
postnatal day 30 cerebellum, Cystatin B knockout model of progressive myoclonus epilepsy
postnatal day 7 cerebellum, Cystatin B knockout model of progressive myoclonus epilepsy
male hippocampus
female hippocampus
male temporal cortex
female temporal cortex
male frontal cortex
female frontal cortex
brain from adult (postnatal day 70) male offspring prenatally exposed to alcohol via voluntary maternal consumption from gestational day 0 to pup postnatal day 10
cerebellum, HdhQ111 knock-in model of Huntington's disease
striatum, HdhQ111 knock-in model of Huntington's disease
soleus muscle, in the basal state, from five-month-old Ts65Dn Down syndrome (DS) males
skeletal muscle (biceps & deltoid)
brain tissue (frontal cortex)
Bone marrow plasma cells
white blood cells - Male Mild Asthma
white blood cells - Female Mild Asthma
white blood cells - Female Severe Asthma
white blood cells - Male Severe Asthma
peripheral blood leukocytes
brain tissue (dorsolateral prefrontal cortex and orbitofrontal cortex)
Fallopian tube
lymphoblast cell lines
terminal ileum
descending colon
ascending colon
entorhinal cortex neurons
colon mucosa
Colon mucosa - colorectal adenocarcinomas with microsatellite instability (MSI CRCs)
Huh7 hepatoma cells (infected with JFH-1 HCV) - 6 Hours post-infection
Huh7 hepatoma cells (infected with JFH-1 HCV) - 12 Hours post-infection
Huh7 hepatoma cells (infected with JFH-1 HCV) - 18 Hours post-infection
Huh7 hepatoma cells (infected with JFH-1 HCV) - 24 Hours post-infection
Huh7 hepatoma cells (infected with JFH-1 HCV) - 48 Hours post-infection
Esophageal normal adjacent tissue
Epithelial cells (pancreatic duct)
Epithelial cells (pancreatic duct))
ovarian epithelial cells
neuroretina
Nasopharyngeal biopsies (with Epstein-Barr virus (EBV)-positive undifferentiated NPC)
nasopharynx
quadriceps
lung tumor cells
Cervical cancer primary tumors and normal cervical epithelium
Cervical cancer cell line and normal cervical epithelium
dental pulp stem cell culture
Testicular seminoma tumors (at pT1) and normal testicular tissue
Testicular seminoma tumors (at pT2) and normal testicular tissue
Testicular seminoma tumors (at pT3) and normal testicular tissue
Invasive ductal carcinoma (IDC) cells, and their normal counterpart
Fra-1 null mice
human prolactinomas
Papillary thyroid carcinoma tumors (without a BRAF mutation) and Normal thyroid specimens
Papillary thyroid carcinoma tumors (with a BRAF mutation) and Normal thyroid specimens
Anaplastic thyroid carcinoma tissue and Normal thyroid tissue
Normal urothelium cells and CIS cells
Hepatocellular carcinoma and Adjacent non-tumorous liver tissues
Skin from SCCs and Normal human epidermis
KYSE human esophageal squamous cell carcinoma cell line and Normal esophageal tissue
Tumor tissues and Adjacent non-tumorous tissues of Hepatocellular Carcinoma
Whole heart (myocardium) from colon cancer bearing mice and non-tumor bearing mice
Skeletal muscle (whole gastrocnemius muscle) from colon cancer bearing mice and non-tumor bearing mice
HCC tumor and matched non-tumor surrounding tissues
Blood myelomonocytic cells from RCC and Healthy blood myelomonocytic cells
skeletal muscle (triceps)
bicep
deltoid
heart, left ventricle apex
Left Ventricle Apex Tissue
motor neurons, 60 days old
motor neurons, 120 days old
ventral spinal cord, motor neurons
spinal cord, 10 weeks old
ocular motor neurons, 10 weeks old
normal resting B cell
marginal lymphoma, BRD2 transgenic
transitional lymphoma, BRD2 transgenic
aggressive lymphoma, BRD2 trangenic
CD33+ myeloid cells
CD19+ B cells
Temporal Lobes
Whole blood (Cutaneous Psoriasis)
Pancreas (Advanced stage of murine PDAC and Control pancreas)
Pancreatic tumor cells (bitransgenic Pdx1-cre/Kras*A MICE) and Pancreatic cells (WT MICE)
Pathological skeletal muscle fibers
Bone marrow mesenchymal stromal cells
Primary dermal fibroblasts (Childhood cerebral adrenoleukodystrophy)
Intestinal biopsies
Epidermal punch biopsies
Circulating CD4+ T-cells (severe asthma)
circulating CD4+ T-cells (non-severe asthma)
Circulating CD8+ T-cells (severe asthma)
Circulating CD8+ T-cells (non-severe asthma)
Primary lung tumor and Normal lung
brain lesion (MS after demyelination - active inflammation)
brain lesion (MS after inflammation - late stage)
Peripheral blood B cells (inactive lupus)
cerebral artery
CD34+ hematopoietic stem cells (refractory anemia)
CD34+ hematopoietic stem cells (refractory anemia with excess blasts 1)
CD34+ hematopoietic stem cells (refractory anemia with excess blasts 2)
CD34+ hematopoietic stem cells (refractory anemia with ringed sideroblasts)
HSC cells
Airway epithelial cells
Non-lesional skin
low-grade serous ovarian carcinomas (tumors from patients with matched border control)
Skeletal muscle biopsies - long duration
Skeletal muscle biopsies - short duration
Microdissected nasopharyngeal carcinoma (NPC) tissues samples - stage T1N0
Microdissected nasopharyngeal carcinoma (NPC) tissues samples - stage T1N1
Microdissected nasopharyngeal carcinoma (NPC) tissues samples - stage T2N1
Microdissected nasopharyngeal carcinoma (NPC) tissues samples - stage T2N2
Microdissected nasopharyngeal carcinoma (NPC) tissues samples - stage T3N2
Synovial fluid macrophages
Peripheral blood mononuclear cells (non-ischemic cardiomyopathy)
Peripheral blood mononuclear cells (ischemic cardiomyopathy)
B lymphocytes
Plasma cells
Peripheral blood expression profile - symptomatic patients (HG-U133A)
Peripheral blood expression profile - presymptomatic patients (HG-U133A)
Granulosa cells
PANC-1 PANCREATIC ADENOCARCINOMA CELL LINE
Mesangial cell
Heart (from CVB3-infected females - day 10 postinfection)
AT2 E/R positive BCP ALL cell line (following E/R -ETV6/RUNX1- knockdown)
beta cells of pancreas
Intestinal mucosa
Connective Tissue in Joints
Tail skin ( K14-AREG psoriasis model)
Ear Skin ( K14-AREG psoriasis model)
Back Skin (K5-Stat3C psoriasis model)
Back Skin (K5-TGFbeta1 psoriasis model)
Back Skin (K5-Tie2 psoriasis model)
Back Skin ( imiquimod -IMQ- psoriasis model)
Tracheal epithelium
Cumulus cells cultured (Lean patients)
Cumulus cells cultured (Obese patients)
Lung (from B6D2F1 females) - 42 days post infection
Lung (from B6D2F1 females) - 63 days post infection
Rectal mucosal epithelia (CFTR D508 Mutation)
Radical prostatectomy tissue samples (TMPRSS2:ERG gene fusion POSITIVE) and Benign prostate tissue
Radical prostatectomy tissue samples (TMPRSS2:ERG gene fusion NEGATIVE) and Benign prostate tissue
Non-lesional (NL) Skin
Uterine tumors (endometrioid histologic subtype) - Stage-Grade:IA-G1
Uterine tumors (endometrioid histologic subtype) - Stage-Grade:IA-G2
Uterine tumors (endometrioid histologic subtype) - Stage-Grade:IA-G3
Uterine tumors (endometrioid histologic subtype) - Stage-Grade:IB-G1
Uterine tumors (endometrioid histologic subtype) - Stage-Grade:IB-G2
Uterine tumors (endometrioid histologic subtype) - Stage-Grade:IB-G3
Uterine tumors (endometrioid histologic subtype) - Stage-Grade:IC-G1
Uterine tumors (endometrioid histologic subtype) - Stage-Grade:IC-G2
Uterine tumors (endometrioid histologic subtype) - Stage-Grade:IC-G3
Uterine tumors (papillary serous histologic subtype) - Stage-Grade:IA-G2
Uterine tumors (papillary serous histologic subtype) - Stage-Grade:IA-G3
Uterine tumors (papillary serous histologic subtype) - Stage-Grade:IB-G3
Lung fibroblasts (Rapid progressing fibrosis)
Lung fibroblasts (Slow progressing fibrosis)
Anterior prefrontal cortex - postmortem - Female
Anterior prefrontal cortex - postmortem - Male
Superior temporal cortex - postmortem - Female
Superior temporal cortex - postmortem - Male
Peripheral blood mononuclear cells (collected from IS patients at least 6 months after the first and only stroke event)
Brain tumor tissue samples of human gliomas and normal brain - Grade:OGIII - Primary tumor
Brain tumor tissue samples of human gliomas and normal brain - Grade:AII - Primary tumor
Brain tumor tissue samples of human gliomas and normal brain - Grade:AIII - Primary tumor
Brain tumor tissue samples of human gliomas and normal brain - Grade:IV - Primary tumor
Brain tumor tissue samples of human gliomas and normal brain - Grade:IV - Secundary tumor
Dermal fibroblast (from childhood cerebral adrenoleukodystrophy (CCALD) patient) and healthy fibroblasts
Induced pluripotent stem cells -iPSC- (derived from childhood cerebral adrenoleukodystrophy patient dermal fibroblasts) and healthy fibroblasts
Peripheral white blood cells
Whole lung - EARLY idiopathic pulmonary fibrosis - male
Lung - UPPER LOBE - ADVANCED idiopathic pulmonary fibrosis - Male
Lung - UPPER LOBE - ADVANCED idiopathic pulmonary fibrosis - Female
Lung - LOWER LOBE - EARLY idiopathic pulmonary fibrosis - Male
Lung - LOWER LOBE - ADVANCED idiopathic pulmonary fibrosis - Male
Lung - LOWER LOBE - ADVANCED idiopathic pulmonary fibrosis - Female
CNS - Brain - Olfactory Bulb (MMHCC)
Biceps biopsies
Primary retinal pigment epithelial (RPE) cells
Embryonic fibroblasts - MBT/Pas animals
Embryonic fibroblasts - BALB/cByJ animals
CD4+ T cells Lymphocytes (sorted from PBMCs from monozygotic twin pairs discordant for RRMS)
Skeletal muscle (from obese women with polycystic ovary syndrome)
Mammary arterial tissue
Endometrial tissue (Endometrioma tissue and eutopic endometrium controls)
Minor salivary glands - Early Sjogren's syndrome
Minor salivary glands - Moderate Sjogren's syndrome
Induced pluripotent stem cell-derived neurons - Male
Induced pluripotent stem cell-derived neurons - Female
Percutaneous needle LIVER biopsies - (hepatokines) - Male
Percutaneous needle LIVER biopsies - (hepatokines) - Female
Fibroblast cell lines - 3 years
Glomeruli
T lymphocytes - Heterozygous FH
T lymphocytes - Homozygous FH
Monocytes - Heterozygous FH
Monocytes - Homozygous FH
Retina (adult CD-1 animals) - 5 weeks
Wrist muscles - Extensor
Wrist muscles - Flexor
Lungs
Esophageal squamous epithelium
Premature newborn umbilical cords - Lower gestational age newborns
Premature newborn umbilical cords - Higher gestational age newborns
nickel-allergic patients whose SKINS were not exposed to nickel
nickel-allergic patients whose SKINS were exposed to nickel - 7 hours
nickel-allergic patients whose SKINS were exposed to nickel - 48 hours
nickel-allergic patients whose SKINS were exposed to nickel - 96 hours
striatal cells
Lymphocytes from patients with moderate stage Huntington's disease - Male
Lymphocytes from patients with moderate stage Huntington's disease - Female
Substantia nigra - Male
Substantia nigra - Female
Articular CONDROCYTES from osteoarthritic knees of Sprague-Dawley males and Sham control
Articular CONDROCYTES from osteoarthritic knees of Sprague-Dawley males and Normal Contralateral control
B cells (sorted peripheral blood lymphocytes)
CD4T cells (sorted peripheral blood lymphocytes)
CD8T cells (sorted peripheral blood lymphocytes)
Natural Killer (NK) cells (sorted peripheral blood lymphocytes)
Intestinal POLYPS model (generated by the deletion of the phosphatase PTEN gene from the intestine)
Sperm cells - from males with consistent and severe teratozoospermia (terastospermia) - (HG-U133 2.0 )
B cells - derived from the spleen (MM model XBP-1s overexpression)
Livers (ATP7B null - Wilson disease model)
vulvar intraepithelial neoplasia (VIN) lesions
Appendix
nonlesional epithelium
Prostate tissue (primary prostate tumor)
Prostate tissue (metastatic prostate tumor)
Normal skin and actinic keratotic (AK) lesion
Disease Name
acute myocardial infarction
amyotrophic lateral sclerosis
muscular atrophy
abdominal aortic aneurysm
liver cirrhosis
MELAS syndrome
autism spectrum disorder
fragile X syndrome
motor neuritis
autistic disorder
intellectual disability
cystic fibrosis
myotonic dystrophy type 1
Down syndrome
Turner syndrome
Lewy body dementia
bipolar disorder
colorectal adenocarcinoma
breast adenocarcinoma
systemic lupus erythematosus
Parkinson's disease
sickle cell anemia
breast cancer
rheumatoid arthritis
anxiety disorder
acute myeloid leukemia
Senescence
dilated cardiomyopathy
oligodendroglioma
melanoma
malignant pleural mesothelioma
Carcinoma in situ of small intestine
colon adenoma
sarcoidosis
Acute arthritis
duodenum cancer
colon cancer
Werdnig-Hoffmann disease
Infection by Yersinia enterocolitica
Osteolysis
Neurological pain disorder
dermatomyositis
bacterial infectious disease
prostate cancer
familial combined hyperlipidemia
Infantile neuronal ceroid lipofuscinosis
Duchenne muscular dystrophy
cocaine dependence
retinoschisis
endometriosis
endometriosis of ovary
obesity
Sepsis
Infertility due to azoospermia
Acute Lung Injury
scleroderma
Human immunodeficiency virus infectious disease
muscular dystrophy
uterine fibroid
nemaline myopathy
osteoporosis
esophagus adenocarcinoma
Barrett's esophagus
severe acute respiratory syndrome
Generalized seizures
Pseudomonas Infection
Familial hypophosphataemic rickets
type 1 diabetes mellitus
Dental cavity, complex
JRA - Juvenile rheumatoid arthritis
Hereditary gingival fibromatosis
Decompensated cardiac failure
NASH
Erectile dysfunction associated with type 2 diabetes mellitus
Nephrolithiasis
ulcerative colitis
Crohn's disease
diabetic retinopathy
Carcinoma in situ of large intestine
inflammatory bowel disease
atherosclerosis
chronic lymphocytic leukemia
arthritis
chronic obstructive pulmonary disease
Simian Acquired Immune Deficiency Syndrome
Osteoarthritis
HIV encephalitis
Primary pulmonary hypoplasia
myocardial infarction
severe combined immunodeficiency
ankylosing spondylitis
type 2 diabetes mellitus
Gamma-hydroxybutyric acidaemia
MDS - Myelodysplastic syndrome
anemia
lymphedema
anterior horn cell disease
hypertension
Anaplasmosis
Dehydration
Spinal Cord Injury
Leber congenital amaurosis
Obstructive sleep apnea
synovial sarcoma
Hypercholesteremia
Diabetic Nephropathy
Schizophrenia
mental depression
Polymyositis
dry eye syndrome
Urothelial carcinoma in situ
autoimmune hepatitis
parasitic protozoa infectious disease
sporadic breast cancer
Fracture of femur
pulmonary hypertension
Tachycardia
testicular cancer
Hypertrophy, Left Ventricular
colitis
Hypoxia
thrombocytopenia
primary open angle glaucoma
congestive heart failure
glaucoma
cerebral infarction
Streptococcal tonsillitis
Eczema
gastroesophageal reflux disease
gastrointestinal stromal tumor
arthropathy
idiopathic interstitial pneumonia
Bone fracture
alpha 1-antitrypsin deficiency
Setleis syndrome
Overexertion
Alcohol poisoning
polycystic ovary syndrome
adenoma
Squamous cell carcinoma of mouth
acne
Venezuelan equine encephalitis
nonspecific interstitial pneumonia
hepatocellular carcinoma
cystitis
Helicobacter pylori gastrointestinal tract infection
Idiosyncratic drug effect
papillary thyroid carcinoma
Septic Shock
hepatitis C
Retinal damage
Ventricular hypertrophy
Vitamin E Deficiency
asthma
Rhinovirus infection
Nicotine addiction
melanoma in situ
dystonia
retinitis pigmentosa
Sendai virus infection
post-traumatic stress disorder
Escherichia coli infection of the central nervous system
thymic carcinoma
Meningococcal infection
allergic asthma
Intestinal metaplasia of gastric mucosa
Psoriasis vulgaris
psoriasis
actinic keratosis
skin squamous cell carcinoma
acute T cell leukemia
pre-eclampsia
Cardiac Hypertrophy
Ventilator-associated lung injury
autoimmune thrombocytopenic purpura
Vitamin A Deficiency
stomach cancer
lung small cell carcinoma
chronic granulomatous disease
Transplanted Heart Complication
Marfan syndrome
acute pancreatitis
pancreatitis
multiple sclerosis
familial hyperlipidemia
Viral cardiomyopathy
Infection by Aspergillus fumigatus
Hypotensive episode
Rett syndrome
status epilepticus
Neurogenic Muscular Atrophy
Adenovirus infection
chronic myeloid leukemia
pulmonary fibrosis
essential hypertension
androgen insensitivity syndrome
epilepsy syndrome
nephroblastoma
cervix carcinoma
Nutritional deficiency, NEC
aplastic anemia
Epithelial proliferation
Rotavirus infection of children
juvenile rheumatoid arthritis
lung adenocarcinoma
Arrhythmogenic Right Ventricular Cardiomyopathy
hemorrhagic thrombocythemia
interstitial cystitis
Schistosomiases
lung squamous cell carcinoma
Hemorrhagic shock
dengue hemorrhagic fever
dengue disease
alcohol abuse
retinoblastoma
Wolfram syndrome
head and neck squamous cell carcinoma
macular degeneration
cellular phase chronic idiopathic myelofibrosis
endogenous depression
Huntington's disease
Niemann-Pick disease
LGLL - Large granular lymphocytic leukemia
tendinitis
Diamond-Blackfan anemia
pancreatic cancer
methylmalonic acidemia
alcoholic hepatitis
Treacher Collins syndrome
leukemia
glomerulosclerosis
Ebola hemorrhagic fever
swine influenza
cerebral palsy
atopic dermatitis
salivary gland adenoid cystic carcinoma
progressive myoclonus epilepsy
Alzheimer's disease
fetal alcohol spectrum disorder
facioscapulohumeral muscular dystrophy
Premature aging
colorectal cancer
multiple myeloma
smoldering myeloma
monoclonal gammopathy of uncertain significance
tuberculosis
Hypertrophy
serous cystadenocarcinoma
nicotine dependence
morbid obesity
APECED - Autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy
pancreatic ductal adenocarcinoma
ductal carcinoma in situ
invasive ductal carcinoma
esophagus squamous cell carcinoma
pancreatic intraductal papillary-mucinous adenoma
pancreatic non-invasive intraductal papillary-mucinous carcinoma
pancreatic invasive intraductal papillary-mucinous carcinoma
ovarian cancer
nasopharynx carcinoma
lung cancer
cervical cancer
cleft lip
testis seminoma
amyotrophic lateral sclerosis type 10
prolactinoma
anaplastic thyroid carcinoma
in situ carcinoma
Lung transplant rejection
renal cell carcinoma
neurofibromatosis
Lung Injury
Emery-Dreifuss muscular dystrophy
peripartum cardiomyopathy
fatty liver disease
diffuse large B-cell lymphoma
discoid lupus erythematosus
psoriatic arthritis
diabetic neuropathy
inclusion body myositis
adrenoleukodystrophy
epidermolysis bullosa simplex
adenosquamous cell lung carcinoma
lung large cell carcinoma
large cell neuroendocrine carcinoma
hepatitis C virus related hepatocellular carcinoma
lupus erythematosus
Leukemia, Chronic T-Cell
intracranial aneurysm
Chronic Lymphocytic Leukemia (Chronic B-lymphocytic leukemia)
myelodysplastic syndrome
Heart Injury
ovarian serous carcinoma
childhood type dermatomyositis
cardiomyopathy
Waldenstrom Macroglobulinemia
Kidney disorder associated with type 2 diabetes mellitus
acute myocarditis
precursor B lymphoblastic lymphoma/leukemia
diabetes mellitus
urticaria
pulmonary tuberculosis
endometrial cancer
influenza
idiopathic pulmonary fibrosis
Ischemic stroke
astrocytoma
glioblastoma multiforme
Alexander disease
Pompe disease, infantile-onset form
West Nile fever
Rift Valley fever
relapsing-remitting multiple sclerosis
Sjogren's syndrome
Williams-Beuren syndrome
nephrosclerosis
familial hypercholesterolemia
pulmonary sarcoidosis
bronchopulmonary dysplasia
allergic contact dermatitis
megakaryocytic leukemia
Intestinal polyposis
Teratospermia
Wilson disease
Vulvar intraepithelial tumor
Burn
appendicitis
silicosis
progeria
colon carcinoma
Drug Name
Imatinib
Celecoxib
Sirolimus
Tretinoin
Phenobarbital sodium
Monuron
Clozapine
Haloperidol
Cocaine
Natural alpha interferon
Interferon gamma-1b
Lipopolysaccharide
Cigarette smoke
Nsc319726
Colistin
Ribavirin
Acetaminophen
Metformin
Atorvastatin
Hydroxyzine
Doxorubicin
Estradiol
Dexamethasone
Laccaic acid
Sunitinib
Ursodeoxycholic acid
1,25 dihydroxyvitamin d
Alfacalcidol
Hodgkin lymphoma
Vemurafenib
Tamoxifen
Decitabine
Isotretinoin
Methylphenidate
Fluoxetine
Mepenzolate bromide
Mepenzolate
Arc (nsc 188491)
Sangivamycin (nsc 65346)
Plx4720
Olanzapine
Rituximab
Imatinib (glivec)
Nilotinib
Fenretinide
Cisplatin
Azacitidine
Methotrexate
Cadmium
Arsenic
Y15
Temozolomide
Plx4032
Deferasirox
Doxycycline
Pimecrolimus
Aminolevulinic acid
Paclitaxel
Pd173074
Fgfr-specific pd173074 inhibitor
Lapatinib
Foretinib
Pioglitazone
Rosiglitazone
Troglitazone
Chromium(iii) nicotinate
Etanercept
2,3,7,8-tetrachlorodibenzo-p-dioxin
Aplidin
Cytarabine
Heroin
Methamphetamine
Trovafloxacin
Ciprofloxacin
Clinafloxacin
Gatifloxacin
Grepafloxacin
Levofloxacin
Formoterol
Soman
Cediranib
Mln4924
Dapt
Epz004777
Bisphenol a
Levetiracetam
Phenytoin
Alitretinoin
Bexarotene
Amoxicillin
Bleomycin
Bortezomib
Captopril
Chlorambucil
Colchicine
Cyclophosphamide
Dactinomycin
Diethylstilbestrol
Cycloheximide
Ethanol
Ethinyl estradiol
Fluorouracil
Folic acid
Glipizide
Hydrocortisone
Irinotecan
Isoflurane
Lubiprostone
Medroxyprogesterone acetate
Menadione
4-vinylcyclohexene diepoxide
Methoxychlor
Metoprolol
Morphine
Permethrin
Deltamethrin
Propofol
Sevoflurane
Carboplatin
Rosiglitazone effect on prdm16-deficient inguinal white adipose tissue
Valproic acid
Vitamin a
Carboplatin (24 h)
Carboplatin (30 h)
Carboplatin (36 h)
Torcetrapib
Triiodothyronine-[13c6] hydrochloride (t3 thyronine)
R1881
Pbde 85
Argyrin a
Diclofenac
Sorafenib
Nicotine
Streptozocin
Insulin regular
Apratoxin a
Imiquimod
4-hydroxynonenal
Trichostatin a
Anastrozole
Bicalutamide
Fluticasone
Corticosterone
Letrozole
Actinomycin d
Sapphyrin pci-2050 (1.25 î¼m)
Sapphyrin pci-2050 (2.5 î¼m)
Acrylamide
Neocarzinostatin
Cobalt dichloride hexahydrate
Arachidonic acid
Trastuzumab
Pertuzumab
Motexafin gadolinium (4 h)
Calcitriol
Casiigly
Ascorbic acid
Cetuximab
Nitric oxide
Quercetin
Interferon beta-1b
Interferon beta-1a
Mk-886
Azathioprine
Mesalazine
Hypochlorous acid
Tibolone
Creatine
Testosterone
L-arginine
Heregulin
Angiotensin ii
Adenosine triphosphate
Lmp-420
Lysophosphatidic acid
Pristane
Thapsigargin
4-hydroxytamoxifen
Gamma-tocotrienol
Phorbol 12-myristate 13-acetate (pma)
Nvp-tnks656 (tankyrase inhibitor)
Nvp-tnks656
Mek inhibitor (meki : azd6244)
Phorbol ester 12-o-tetradecanoylphorbol-13-acetate (tpa)
Curcumin
Puromycin, ec50, 1 d
Puromycin, ec50, 3 d
Puromycin, ec50, 5 d
Puromycin, 2xec50, 1d
Puromycin, 2xec50, 3 d
Sb 216763
3,3',4,4'-tetrachlorobiphenyl
2,2',4,4',5,5'-hexachlorobiphenyl (pcb-153)
Fasudil
Nickel chloride
Cadmium dichloride
Sodium dichromate
Cholestyramine
Citalopram
Carbidopa
Oprelvekin
Cyclosporine
Abiraterone
Mycophenolic acid
Dasatinib
Trichloroethylene
Pyrazinamide
Vx
Sodium arsenite
Concanavalin a
Insulin
Bpde
D-serine
Pbde 47
Vancomycin
Androstanolone
Cadmium chloride
2,3,7,8-tetrachlorodibenzo-p-dioxin (tcdd)
Sulforaphane
Calcitonin
Ubiquinol
Coenzyme q10
Resveratrol
Nicotinamide riboside
Luteolin
Gefitinib
Vitamin e
Nickel
Harman
Laminin
Vitamin c
Perfluorooctanoic acid
Progesterone
Dmnq (2,3-dimethoxy-1,4-naphthoquinone)
Phenol
Antimony
Mercury
Chromium
1,2,4-benzenetriol
Formaldehyde
Palmitic acid
Vanadium pentoxide
Sodium pyruvate
Caerulein
1-naphthyl isothiocyanate
N-nitrosodimethylamine
N-methylformamide
Chlorpyrifos
Cyfluthrin
Mehp
Sodium butyrate
Zinc acetate
Motexafin gadolinium
Leptin
3h-1,2-dithiole-3-thione
Hydrogen peroxide
Genistein
Phosgene
Simvastatin
Orotic acid
Halothane
Aldosterone
Methylprednisolone
2,3-dimethoxy-1,4-naphtoquinone (dmnq)
1-benzylpiperazine
1-[3-(trifluoromethyl)phenyl]piperazine
1-(4-methoxyphenyl)piperazine
1-piperonylpiperazine
Capsaicin
Promegestone
Telapristone acetate
Hs Gene Symbol
PMP22
CFTR
APC
DMD
CHRNA4
DYSF
PDPN
ALDH5A1
ALAS2
RPE65
SCD
NFE2L2
NFE2L1
ABCB4
RP1
IKZF1
BHLHA15
FH
IL10
WFS1
SLC6A4
MUT
GATA4
CSTB
TP53INP2
TRAF3
E2F2
E2F3
FOSL1
HTT
RUNX1
IFNAR1
GFAP
GATA1
XBP1
RARA
TXNRD1
NCOA1
ELANE
BRAF
BACH2
MAP3K7
NR2C2
MAPK1
MAPK7
RB1
ZFP36
ADRB1
PPARG
PRDM16
TGM2
FGFR3
THRA
THRB
SRF
ATM
TP53
RELA
RETNLB
EGFR
PRKCZ
NET1
ESR1
ZXDC
POR
CALCR
CSTF2T
KEAP1
GHR
SOX7
SOX17
MYC
OLR1
RBM15
TP63
L1CAM
NRAS
KCNIP3
IL13
SERPINI1
PRKAG3
UPF1
LHB
ESRRB
EP300
MBD2
DNMT1
MUC2
FOXP3
IKZF4
SOCS3
ARID1A
TWIST1
CCAR2
TFAM
ZNF217
IFNG
CD70
TNF
SIRT6
CXCL8
IDH2
NOD2
CMAHP
AGER
MYD88
E2F1
IRAK4
PARK7
ERBB2
TRAF6
BRCA1
IFNAR2
TLR4
IRF7
LOXL2
VDR
RORA
SMAD3
TRPV4
STAT6
GATA3
GATA6
E2F4
FOXO1
NXNL1
VPRBP
XIAP
AIRE
CLDN16
MYOD1
HNF4A
IKBKB
CITED2
IL2
FLI1
CCL3
PPARGC1B
APLP2
APP
APPL2
EMD
LMNA
CD24
LAMTOR2
MSTN
TGFB1I1
CTNNB1
MIF
RIF1
CBFB
DICER1
H3F3A
PPRC1
CDH1
PCDH12
CTCF
RAG1
RFWD2
SIN3A
MTDH
H19
PTEN
APOD
TCF4
SNCA
COMMD3-BMI1
PCGF2
ALK
NR4A2
CDK4
ABCA1
HIPK2
IL4
UTRN
INSR
KMT2D
KDM6A
CLPP
BCL3
IGF1
EP400
KAT5
SMARCA4
MBD3
POU5F1
RAD21
REST
SUZ12
YY1
ZFP42
ARID3A
PCGF6
NFYA
NFYB
NFYC
HSPA9
MECOM
PPARGC1A
AURKA
NANOG
SOX2
TET1
GMNN
MTF2
FOXM1
CBX3
TRNP1
KDM2B
PIAS1
RNF40
DDIT3
ATP1A1
HIF1A
SALL4
NOTCH3
HDAC1
HDAC2
FOXD3
NFATC3
VGLL4
SMARCB1
BMI1
UBR5
EZH2
PRMT6
NEUROG1
KLF5
DUX4
HES6
FOXP1
YAP1
GLO1
SHH
ONECUT1
RAP1A
TAL1
SNAI1
EED
HPRT1
GTF2I
OGT
HUNK
DGCR8
AHR
PDSS2
ZFX
ATF6
PARP2
SETD2
RBBP8
TSC1
RPTOR
MET
OVOL2
TFAP2C
PBRM1
BAP1
GNMT
B2M
PIK3CA
JUN
KMT2A
INSIG1
POLG
STAT1
PHGDH
BATF
FCGR2A
IRF4
IRF6
CLOCK
HOXA10
SGK1
LAMP3
GK
ALKBH1
SOD2
NASP
SP3
HDAC3
CLDN2
ITK
IL6
NFKB1
MN1
ETS2
KLF1
YWHAE
PAFAH1B1
DCX
NDEL1
BMPR1A
OTX2
TGFB1
NEUROG3
PLAGL2
PRMT1
HHLA1
SOX3
TRIP12
NPTX1
ZBTB7B
DEAF1
DDR1
TOP2B
TNFAIP6
MMP8
LRRK2
IL1RN
ITGA7
NOTCH1
TMEM173
IKBKG
LAT2
PRMT8
ZNF322
FOXA1
NCOA3
TRIM71
PRDM14
B4GALNT2
GRN
BMPR2
POU1F1
MIR140
NPM1
GFI1
MYB
NCSTN
HNF1B
HNF1A
IFNB1
TRAC
TRB
PSMD14
DDB1
CALR
MKL2
RING1
RNF2
PRKCDBP
CYR61
LEF1
RNF185
LMO3
ZFPM2
STAT3
RBP2
PARK2
ZFP36L2
AGO1
GSK3A
GSK3B
MIR128-1
TCOF1
TFRC
IPMK
BCL6
NR5A2
KLF13
KDM5A
SDC1
CD47
AGR2
SMCHD1
FGFR1
LCK
ZAP70
BNIP3L
RET
ABL1
IRAK2
IGF1R
MYLK
STK33
TBK1
KRAS
PDGFRA
KIT
FGFR2
CDK8
ERBB3
NTRK3
CDK9
JAK2
ILK
PDK1
AKT1
MAP3K1
RAF1
KSR1
SNRK
CDK19
SYK
JAK1
MAP2K1
PTK7
MELK
ULK1
DES
AKT2
BRD4
CCND1
NCOA2
EPHB2
EPHA4
HOXC13
MOK
SRC
SPI1
TGFBR1
TGFBR2
TNIK
GPLD1
TRIM24
TRIM28
TRIM33
TRPM7
ZNF750
KSR2
RPS6KA3
PRKACA
WEE1
KLF4
IRF1
YY2
HSF1
CEBPA
BCOR
POU4F1
EOMES
NRF1
ETS1
WT1
CREB1
ESRRA
DLX4
ZNF148
NR1I2
FOXA2
TCF3
TCF12
CDKN1B
AR
IRF8
DMRTA2
SETDB1
LAMC2
ARF1
NR2F2
SATB1
SATB2
IGH
SP1
MED12
SMC3
PDE1C
INSM1
TNFSF14
EGR3
TIAM1
CABIN1
HIRA
GAPDH
BCAR1
SOST
PINK1
PPP2R2D
EGR2
PTPN2
ARHGAP5
HMGN5
MYRF
PIK3CB
POU2AF1
MGEA5
BPTF
NFKBIA
BST1
MIR148B
MIR126
FTO
YWHAZ
TFPI
PRSS2
ITGB1
ERO1L
SIRT1
NPAP1
WNT1
DTX1
MAML1
H3F3B
HTRA2
CHRNA9
VAX2
ZBTB7A
SMARCA5
NR2E3
KITLG
GHRH
HMGB1
RICTOR
NR0B2
CTLA4
SMAD4
PRMT5
CYP27B1
DOCK8
MIR122
IFITM1
IL17RC
MECP2
FMR1
TSC2
LRP5
SST
ACHE
ESR2
PPARA
NFXL1
SCYL1
MSI2
CBFA2T3
DNAJC7
GYS1
MIR221
TYROBP
TREM2
ADORA2A
PSAP
GNB5
BDKRB1
AHNAK
NSUN2
HES1
CHSY1
ACVR1
S1PR2
S1PR3
VHL
NFKBIZ
GRHL2
IRS1
IRS2
IRS3P
IRS4
TIA1
ATF2
CREM
OVOL1
MIR517A
CFAP45
HMGA2
FABP5
ATXN1
SIRT7
STUB1
BCL2
KDR
PSMC4
FLNB
LLGL1
TOX3
SPDEF
ACTL6A
ANCR
KDM1B
CD44
ERG
POU3F3
NRL
TERT
PBX1
ATF6B
IL22
RYBP
MSR1
KLF3
PDE6B
CASP1
PYCARD
CYFIP1
MIR30A
FOXO3
TAF4B
ARX
HRAS
MAP2K3
MAP2K7
ARNTL
CDKN1A
FSHR
FOXL2
DMRT1
SOX9
ADRA2B
MMP7
MMP10
CITED1
PAGE5
PIR
PAX3
MCAM
PSIP1
LITAF
NOTCH2
KRT1
VLDLR
PPT1
CEBPG
ARNTL2
TAF1
CREBBP
NELFE
GTF2B
POU2F1
STAT2
IRF5
NFKB2
E2F6
NR3C1
IRF9
PAX5
JUND
WHSC1
ZHX2
RXRA
IRF3
IKZF3
HCST
SREBF2
DIP2B
ZBTB38
USF1
BCL11B
E2F8
KLHL40
BTK
MBD1
ELAVL1
ELF4
SOX10
CASP2
STAG2
NFIX
ATXN1L
DNMT3B
THOC5
CPSF6
JAG1
ELK1
AATF
THOC1
MED19
KDM3A
KLF2
EPAS1
FGF21
DLX5
NRG4
DUSP5
CXCL5
MAT1A
PDE10A
TERC
ZMPSTE24
ZNF658
BRMS1
PKD1
OPTN
CXCR4
ANGPT1
CDC73
NME2
MYOC
MIR210
BAHD1
TFEB
MIR26B
KDM6B
TET2
TET3
VAMP7
INHA
HSPB8
RARB
MEG3
HDC
STK11
DBI
ING2
CRHR2
TCF7
AGTR1
GFI1B
MAP3K8
KDM1A
ATXN7
TMEM100
EGR4
FAM60A
CLDN1
PDCD10
GRID2
FGF23
HSPA1A
NR1I3
IL1B
PITX2
IL13RA1
PGR
TADA3
NEUROD1
HIVEP2
PAX6
ADAM17
RNH1
PTRF
ING1
GADD45A
IFNL3
EPCAM
USP22
BRWD1
ALDH1A2
RASGRF1
LHX1
RARRES1
HMX1
AMER1
SOX11
MED1
NLGN1
NLGN3
SHANK3
MEF2D
MEF2A
MYBL1
TGFB2
CBX2
PRNP
PDX1
SLC18A3
HDAC6
MYCN
GATA5
SIRT3
HMGN1
SARM1
CAV3
FFAR4
KLF15
ACADM
DOT1L
PTHLH
USP2
PIN1
MIR222
SIRT4
EWSR1
MIR142
PLIN5
UBB
SLC9A3
LIPE
PML
HIF1AN
SFRP5
CIDEC
ADORA2B
SGPL1
CLDN18
SPARC
EGR1
MAPK14
ARHGDIB
TRIB1
TAF7L
CAV1
YY1AP1
SSFA2
AQP11
KDM4C
SON
TRPS1
LAMA2
FHL2
APLN
H6PD
RBL1
EMX2
ST6GAL1
SOX4
GLI1
ID4
TMOD3
CNR1
ESRRG
NFIA
MIR34A
KLF9
DPP3
SQSTM1
ATR
CHEK1
CHEK2
TP53BP1
PTPN1
MNAT1
ADNP
PPIF
PPP1R1A
HDAC9
COMMD5
CHRNB4
SFTPC
DUSP1
DBH
DROSHA
EZR
MIR20A
PPARD
CIITA
ZNF395
RRM2B
PPIB
TRPM2-AS
RRP1B
TARBP2
MIR1-2
STAU1
LMX1B
EBF1
ELAVL4
ADRB2
GAST
WTAP
BNC1
RPS4X
ADAM10
EIF2AK3
NACA
XRCC5
DDIT4
PTGS2
NF1
ZNRF2
MSGN1
IGHMBP2
SOD1
TWIST2
TARDBP
TTN
RS1
ATP7B
SH2B3
BRD2
MS4A1
CDH11
LEP
ACVRL1
TNKS
CADM1
EHMT2
PEBP1
ROCK1
NOS3
CLCN5
Pert Type
Trembler PMP22 point mutation
KO
OE
Deficiency
APC(Min/+) mutant
KD
NULL MUTATION
Null mutation (low far, high carbohydrate)
knock-out (male)
knock-out (female)
IkL/L mutation
Deletion - for the second exon
Gain of function by knock in of htt cag repeat length: 7/16
Gain of function by knock in of htt cag repeat length: 7/45
Gain of function by knock in of htt cag repeat length: 7/85
Gain of function by knock in of htt cag repeat length: 7/111
Knock-in
Mutation (HTT exon1 142Q)
Truncated Expression ( GATA-1deltaNeodeltaHS mutant)
DeltaN mutation
expression of XBP1s, an spliced version of the protein
Inhibition
Drug
Beta-1 receptor blocker (NEBIVOLOL)
Activation - AM580 (RARA Agonist)
DEPLETION
knockdown
HCC mutant al
RCCC mutant 6a
HCC mutant bN
RCCC mutant 15b
drugactivation
knock-down (63 shRNA, with lysophosphatidic acid agent treatment
knock-down (65 shRNA, with lysophosphatidic acid agent treatment
Depletion (with phorbol 12-myristate 13-acetate agent treatment)
depletion (treatment with phorbol 12-myristate 13-acetate)
truncated at residue m291
Mutation (569)
Silencing
Mutation - TAp63alpha-Q540L missense mutation in the SAM domain
DEPLETION - siRNA siMut10
DEPLETION - siRNA siMut12
Mutation - G392E mutant
Mutation - R225Q transgenic mutants
Mutation - (ERR-beta; NR3B2)
"missense mutation (T2996C, Accession AJ511873) resulting i
"missense mutation (G9492A, Accession AJ511872) resulting i
FOXP3 2T>C(mut)
DELETION
transgene
siTNF
siTNF-OMe
siTNF-OMeP
human IL8 transgenic
R140Q Allele
IRAK4 kinase deficient mutant
shRNA
stable BRCA1 transfection of BRCA1-null cells
stable IRF7 transfection (pMSCV)
homozygous Srf mutant 81 (vector control treatment)
homozygous Srf mutant (non-binding Srf treatment)
homozygous Srf mutant 81 (non-binding Srf treatment)
homozygous Srf mutant 100 (non-binding Srf treatment)
homozygous Srf mutant (constitutive Srf treatment)
homozygous Srf mutant 81 (constitutive Srf treatment)
Depletion - Early passage
DEPLETION -Late passage
Ectopic expression - (transgenic AIRE overexpression)
Mutation - MyoD altered at lysine residues 99, 102, and 104, ren
EWS-FLI1 fusion protein expression
Constitutive expression
Hypomorphic Mutation
L540Q point mutation
Reduced expression
beta-catenin S37A mutant
Deficiency - Heterozygous deletion
Mutation (G34R - mutation of key residues in histone H3.3)
Mutation (K27M - mutation of key residues in histone H3.3)
Partial Depletion
knock-down (with LIF agent treatment)
Depletion - siRNA
mutation, beta1-Gly389
JoMa1 cells are pluripotent precursor cells, derived from the ne
DN
SNCA triplication
Heterozygotic knockout (Cdk4 +/-)
Heterozygotic knockout (Abca1+/-)
Heterozygotic knockout (Abca1 +/-)
mutation leading to lack of expression (mdx mutant)
heterocygotic for Hspa9+/-
expression by viral transduction
Null mutation (IFN-beta agent treatment, 2/4 hours)
Null mutation (IFN-gamma agent treatment, 2/4 hours)
knock-out (treated with 2 ug/ml tunicamycin for 4 hours)
knock-out (treated with 2 ug/ml tunicamycin for 8 hours)
Rap1a mutant ile312val
low-affinity mutant
tamoxifen-induced activation
Mutation
mutant
Overexpression of a dominant negative form
MLL chromosomal translocation (tMLL) compared to partial tandem
Stat1 delta alpha (da), deficient for STAT1 dimer with C-termina
Stat1 delta beta (db), deficient for STAT1 dimer without C-termi
Control = siRNA inhibition vs. Treatment = overexpression
Intestinal Epithelial Cells specific deletion of HDAC3
knockout
anti-IL6 monoclonal antibody, neutralization
reotrviral delivery of MN1 or MN1VP16 fusion for transcriptional
Conditional expression (induced with doxycycline)
Global supression
Gly2019Ser (G2019S) mutation knockin
Drug inhibition (X5050)
deficiency (mutation)
V290M dominant negative mutation
dominant negative mutation BMPR2delx4+
Snell mutant PIT1-dw
INACTIVATION - siRNA
Delx4 mutation
R899X mutation
mutated npm
dominant negative mutation - G2019S heterozygous
dominant negative mutation - G2019S homozygous
Oncogenic mutation
F508 CFTR mutation
mutation (unspecified)
Over-expression - (HNF1beta A263insGG mutant)
Induction
Stimulation ( anti-α-chain (aVα2))
Stimulation ( β-chain (aVβ5) antibody)
doxcicline mediated induction
Drug inhibition (0.5mM VPA for 4 hs)
Drug inhibition (0.5mM VPA for 16 hs)
Myc +/- vs. WT
small molecule inhibition
siOGT
activemutant
druginhibition
oncogenic KRAS mutation
defectivemutant
overexpression
depletion (at 12-14 month old)
VR
Knock-down, shRNA
PTEN F341V
HGPS single-point mutation
Overexpression of mutated NSBP1SE protein which does not bind to
constitutive activation
overexpressing a hyperactive mutant
MAML1 dominant-negative
Ectopic expression - (NRL null retinas expressing NR2E3)
stimulation
gene truncation
inactivating mutation
AChE-R over-expressor mutation
AChE-S mutation
AChE-S over-expressor mutation
INHIBITION (ERK inhibitor U0126)
d337T mutation - dominant negative
transient expression of constitutively active IKKβ(E
knock-down using shRNA targeting p63 transactivating (TA) domain
Over-expression of Î???????Np63α isoform lacking
Over-expression of TAp63γ isoform
hypomorphic prosaposin deficiency
Huntington's Disease mutation
Activation
Reactivation (WASHOUT - 2 Hours)
Reactivation (WASHOUT - 4 Hours)
Inactivation (IKK Inhibition)
Expression
RD1 mutation (postnatal day 2)
RD1 mutation (postnatal day 4)
RD1 mutation
Selective cardiac induced overexpression of the gene for in male
Selective cardiac induced overexpression of the a constitutively
Silencing - siRNA1
Silencing - siRNA2
Silencing - siRNA3
Truncation of gene product
Knockin
Stimulation of gene product
expression of a constitutively active allele of the IÎ&ord
Silencing - siRNA
Transgenic
expression of human gene
transgene (uninfected 5 days post infection)
hNR1I3 KI (in mNR1I3-/- background)
Challenge
Actvation of gene product
Conditional KO on inmortalized MEFs
Conditional KO under Crx promoter
KO in the B lineage
Conditional KO in the B lineage
Conditional KO in keratinocytes
mutant (SNP polymorphism)
Induced expression / Over-expression
Missense mutation R28C
cpb heterozygous mice
Mutation (R225Q)
siRNA
agonist activation
INACTIVATION
Transfection
natural variation
RNAi Knock down
Constitutional activation
Ectopic expression
Inactivation
Deficiency - Ablation
Deficiency - NULL MUTATION
INHIBITION - trichostatin A
Activation - 2 hours
Activation - 4 hours
Activation - 8 hours
Activation - 24 hours
Activation - 21 days
NULL MUTATION - Ablation
Antisense Inhibition
Activation (deltaNB-cateninER transgenics)
ablation S105 phosphorylation site
ABLATION
Repression
knock-down (shRNA 2-4)
knock-down (shRNA 4-1, doxycycline-induced)
knock-down (shRNA 6-16, doxycycline-induced)
Heterozygotic knockout (NF1+/-)
INHIBITION - EPZ004777
CAG knock in
LMNA H222P heterozygous knock in mutation
mutation (Arg1174Gln)
mutation Ighmbp2nmd-2J (homozygous)
SOD1-G93A transgenic
Q119X Homozygous Mutation
Beta-1 receptor blocker (METOPROLOL)
Mutation (HTT exon1 18Q)
Mutation (HTT exon1 142Q)
D508 mutation
TMD mutation
heterozygous de novo RTT mutations
Heterozygous germline mutations
blockade of gene product (CD20)
Inhibition - (laccaic acid A)
Lmna Gly609Gly knock-in
G93A mutation
Drug inhibition
Mm Gene Symbol
Pmp22
Cftr
Apc
Dmd
Chrna4
Dysf
Pdpn
Aldh5a1
Alas2
Rpe65
Scd1
Nfe2l2
Nfe2l1
Abcb4
Rp1
Ikzf1
Bhlha15
Fh1
Il10
Wfs1
Slc6a4
Mut
Gata4
Cstb
Trp53inp2
Traf3
E2f2
E2f3
Fosl1
Htt
Runx1
Ifnar1
Gfap
Gata1
Xbp1
Rara
Txnrd1
Ncoa1
Elane
Braf
Bach2
Nr2c2
Mapk1
Mapk7
Rb1
Zfp36
Adrb1
Pparg
Prdm16
Tgm2
Fgfr3
Thra
Thrb
Srf
Atm
Trp53
Rela
Retnlb
Egfr
Prkcz
Net1
Esr1
Zxdc
Por
Calcr
Cstf2t
Keap1
Ghr
Sox7
Sox17
Myc
Olr1
Rbm15
Trp63
L1cam
Nras
Kcnip3
Il13
Serpini1
Prkag3
Upf1
Lhb
Esrrb
Ep300
Mbd2
Dnmt1
Muc2
Foxp3
Ikzf4
Socs3
Arid1a
Twist1
Ccar2
Tfam
Zfp217
Ifng
Cd70
Tnf
Sirt6
Idh2
Nod2
Ager
Myd88
E2f1
Irak4
Park7
Erbb2
Traf6
Brca1
Ifnar2
Tlr4
Irf7
Loxl2
Vdr
Rora
Smad3
Trpv4
Stat6
Gata3
Gata6
E2f4
Foxo1
Nxnl1
Vprbp
Xiap
Aire
Cldn16
Myod1
Hnf4a
Ikbkb
Cited2
Il2
Fli1
Ppargc1b
Aplp2
App
Appl2
Emd
Lmna
Lamtor2
Mstn
Tgfb1i1
Mif
Rif1
Cbfb
Dicer1
Pprc1
Cdh1
Pcdh12
Ctcf
Rag1
Rfwd2
Sin3a
Mtdh
Pten
Apod
Tcf4
Snca
Bmi1
Pcgf2
Alk
Nr4a2
Cdk4
Abca1
Hipk2
Il4
Utrn
Insr
Kmt2d
Kdm6a
Clpp
Bcl3
Igf1
Ep400
Kat5
Smarca4
Mbd3
Pou5f1
Rad21
Rest
Suz12
Yy1
Zfp42
Arid3a
Pcgf6
Nfya
Nfyb
Nfyc
Hspa9
Mecom
Ppargc1a
Aurka
Nanog
Sox2
Panct1
Tet1
Gmnn
Mtf2
Foxm1
Cbx3
Trnp1
Kdm2b
Pias1
Rnf40
Ddit3
Atp1a1
Hif1a
Sall4
Notch3
Hdac1
Hdac2
Foxd3
Nfatc3
Vgll4
Smarcb1
Ubr5
Ezh2
Prmt6
Neurog1
Klf5
Hes6
Yap1
Glo1
Shh
Onecut1
Rap1a
Tal1
Snai1
Eed
Hprt
Gtf2i
Ogt
Hunk
Dgcr8
Ahr
Pdss2
Zfx
Atf6
Parp2
Setd2
Rbbp8
Tsc1
Rptor
Met
Ovol2
Tfap2c
Pbrm1
Bap1
Gnmt
B2m
Pik3ca
Jun
Kmt2a
Insig1
Polg
Stat1
Phgdh
Batf
Fcgr3
Irf4
Irf6
Clock
Hoxa10
Sgk1
Lamp3
Gykl1
Alkbh1
Sod2
Nasp
Sp3
Hdac3
Cldn2
Itk
Il6
Nfkb1
Mn1
Ets2
Klf1
Ywhae
Pafah1b1
Dcx
Ndel1
Bmpr1a
Otx2
Tgfb1
Neurog3
Plagl2
Prmt1
Hhla1
Sox3
Trip12
Nptx1
Zbtb7b
Deaf1
Ddr1
Top2b
Tnfaip6
Mmp8
Lrrk2
Il1rn
Itga7
Notch1
Tmem173
Ikbkg
Lat2
Prmt8
Zfp322a
Foxa1
Ncoa3
Trim71
Prdm14
B4galnt2
Grn
Bmpr2
Pou1f1
Npm1
Gfi1
Myb
Ncstn
Hnf1b
Hnf1a
Ifnb1
Psmd14
Ddb1
Calr
Mkl2
Ring1
Rnf2
Prkcdbp
Cyr61
Lef1
Rnf185
Zfpm2
Stat3
Rbp2
Park2
Zfp36l2
Ago1
Gsk3a
Gsk3b
Tcof1
Tfrc
Ipmk
Bcl6
Nr5a2
Klf13
Kdm5a
Sdc1
Cd47
Agr2
Smchd1
Fgfr1
Lck
Zap70
Gm10480
Ret
Abl1
Atf7ip2
Irak2
Igf1r
Mylk
Stk33
Tbk1
Kras
Pdgfra
Kit
Fgfr2
Cdk8
Erbb3
Ntrk3
Cdk9
Jak2
Ilk
Pdk1
Akt1
Map3k1
Raf1
Ksr1
Snrk
Cdk19
Syk
Jak1
Map2k1
Ptk7
Melk
Ulk1
Des
Akt2
Ccnd1
Ncoa2
Ephb2
Epha4
Hoxc13
Mok
Src
Spi1
Tgfbr1
Tgfbr2
Tnik
Gpld1
Trim24
Trim28
Trim33
Trpm7
Zfp750
Ksr2
Rps6ka3
Prkaca
Wee1
Klf4
Irf1
Yy2
Hsf1
Cebpa
Bcor
Pou4f1
Eomes
Nrf1
Ets1
Wt1
Creb1
Dlx4
Zfp148
Nr1i2
Foxa2
Tcf3
Tcf12
Cdkn1b
Ar
Irf8
Dmrta2
Setdb1
Lamc2
Arf1
Nr2f2
Satb1
Satb2
Sp1
Med12
Smc3
Pde1c
Insm1
Tnfsf14
Egr3
Tiam1
Cabin1
Hira
Gm20899
Bcar1
Sost
Pink1
Ppp2r2d
Egr2
Ptpn2
Arhgap5
Myrf
Pik3cb
Pou2af1
Mgea5
Bptf
Nfkbia
Bst1
Fto
Ywhaz
Tfpi
Prss2
Itgb1
Ero1l
Sirt1
Wnt1
Dtx1
Maml1
H3f3b
Htra2
Vax2
Zbtb7a
Smarca5
Nr2e3
Kitl
Ghrh
Rictor
Nr0b2
Ctla4
Smad4
Prmt5
Cyp27b1
Dock8
Il17rc
Mecp2
Fmr1
Tsc2
Lrp5
Sst
Ache
Esr2
Ppara
Nfxl1
Scyl1
Msi2
Cbfa2t3
Dnajc7
Gys1
Tyrobp
Trem2
Adora2a
Psap
Gnb5
Bdkrb1
Ahnak
Nsun2
Hes1
Chsy1
Acvr1
S1pr2
S1pr3
Vhl
Nfkbiz
Grhl2
Irs1
Irs2
Tia1
Atf2
Crem
Ovol1
Cfap45
Fabp5
Atxn1
Sirt7
Stub1
Bcl2
Kdr
Psmc4
Flnb
Llgl1
Tox3
Spdef
Actl6a
Cd44
Erg
Nrl
Tert
Pbx1
Atf6b
Iltifb
Rybp
Msr1
Klf3
Pde6b
Casp1
Pycard
Cyfip1
Taf4b
Arx
Hras
Map2k3
Map2k7
Arntl
Cdkn1a
Fshr
Foxl2
Dmrt1
Sox9
Adra2b
Mmp7
Mmp10
Cited1
Pir
Pax3
Mcam
Psip1
Litaf
Notch2
Krt1
Vldlr
Ppt1
Cebpg
Arntl2
Taf1
Crebbp
Nelfe
Gtf2b
Pou2f1
Stat2
Irf5
Nfkb2
E2f6
Nr3c1
Irf9
Pax5
Jund
Whsc1
Zhx2
Rxra
Irf3
Ikzf3
Hcst
Srebf2
Dip2b
Zbtb38
Usf1
Map3k7
Bcl11b
E2f8
Klhl40
Btk
Mbd1
Elavl1
Elf4
Sox10
Casp2
Stag2
Nfix
Atxn1l
Dnmt3b
Thoc5
Jag1
Elk1
Aatf
Thoc1
Med19
Kdm3a
Klf2
Epas1
Fgf21
Dlx5
Nrg4
Dusp5
Mat1a
Pde10a
Zmpste24
Zfp735
Brms1
Pkd1
Optn
Cxcr4
Angpt1
Cdc73
Nme2
Myoc
Bahd1
Tfeb
Kdm6b
Tet2
Tet3
Vamp7
Inha
Hspb8
Rarb
Hdc
Stk11
Dbi
Ing2
Crhr2
Agtr1a
Gfi1b
Map3k8
Kdm1a
Atxn7
Tmem100
Egr4
Fam60a
Cldn1
Pdcd10
Grid2
Fgf23
Nr1i3
Il1b
Pitx2
Il13ra1
Pgr
Tada3
Neurod1
Hivep2
Pax6
Adam17
Rnh1
Ptrf
Ing1
Gadd45a
Ifnl3
Epcam
Usp22
Brwd1
Aldh1a2
Rasgrf1
Lhx1
Rarres1
Hmx1
Amer1
Sox11
Med1
Nlgn1
Nlgn3
Shank3
Mef2d
Mef2a
Mybl1
Tgfb2
Cbx2
Prnp
Pdx1
Slc18a3
Hdac6
Mycn
Gata5
Sirt3
Hmgn1
Sarm1
Cav3
Ffar4
Klf15
Acadm
Dot1l
Pthlh
Usp2
Pin1
Sirt4
Plin5
Slc9a3
Lipe
Pml
Hif1an
Sfrp5
Cidec
Adora2b
Sgpl1
Cldn18
Sparc
Egr1
Mapk14
Arhgdib
Trib1
Taf7l
Cav1
Ssfa2
Aqp11
Kdm4c
Son
Trps1
Lama2
Fhl2
Apln
H6pd
Rbl1
Emx2
St6gal1
Sox4
Gli1
Id4
Tmod3
Cnr1
Esrrg
Nfia
Klf9
Dpp3
Sqstm1
Atr
Chek1
Chek2
Trp53bp1
Ptpn1
Mnat1
Adnp
Ppif
Ppp1r1a
Hdac9
Commd5
Chrnb4
Sftpc
Dusp1
Dbh
Drosha
Ezr
Ppard
Ciita
Zfp395
Rrm2b
Ppib
Rrp1b
Tarbp2
Stau1
Lmx1b
Ebf1
Elavl4
Adrb2
Gast
Wtap
Bnc1
Adam10
Eif2ak3
Naca
Xrcc5
Ddit4
Ptgs2
Nf1
Znrf2
Msgn1
Ighmbp2
Sod1
Twist2
Tardbp
Ttn
Rs1
Atp7b
Sh2b3
Brd2
Ms4a1
Cdh11
Lep
Acvrl1
Tnks
Cadm1
Ehmt2
Pebp1
Rock1
Nos3
Clcn5
Interactive heatmap visualization of RNA-seq dataset GSE16256
ARCHS4
,
Clustergrammer
Highly interactive web-based heatmap visualization of the top 500 most variable genes in t...
Interactive heatmap visualization of RNA-seq dataset GSE17312
ARCHS4
,
Clustergrammer
Highly interactive web-based heatmap visualization of the top 500 most variable genes in t...
Interactive heatmap visualization of RNA-seq dataset GSE18927
ARCHS4
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Clustergrammer
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Interactive heatmap visualization of RNA-seq dataset GSE22959
ARCHS4
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Clustergrammer
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Interactive heatmap visualization of RNA-seq dataset GSE24565
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Clustergrammer
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Interactive heatmap visualization of RNA-seq dataset GSE26880
ARCHS4
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Clustergrammer
Highly interactive web-based heatmap visualization of the top 500 most variable genes in t...
Interactive heatmap visualization of RNA-seq dataset GSE27016
ARCHS4
,
Clustergrammer
Highly interactive web-based heatmap visualization of the top 500 most variable genes in t...
Interactive heatmap visualization of RNA-seq dataset GSE27452
ARCHS4
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Clustergrammer
Highly interactive web-based heatmap visualization of the top 500 most variable genes in t...
Interactive heatmap visualization of RNA-seq dataset GSE28115
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Clustergrammer
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Interactive heatmap visualization of RNA-seq dataset GSE29278
ARCHS4
,
Clustergrammer
Highly interactive web-based heatmap visualization of the top 500 most variable genes in t...
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