!direction	-1
!num_genes	255
!diffexp_method	chdir
!cutoff	500
!correction_method	None
!threshold	None
!organism	Homo sapiens
!organism	Homo sapiens
!cell	MCF10A 
!perturbation	miR2 
!time	3 day culture
!gene	PTPN11 (SHP2)
!entrez gene	5781
!disease	Breast cancer
!end_metadata
CHRNA9	-0.056353
TLR2	-0.045510
RHCG	-0.045323
PRDM1	-0.043703
LOC441233	-0.043108
HTR1D	-0.041882
SLC2A3	-0.040065
CASP14	-0.038821
ADAMTS6	-0.036811
MSL3P1	-0.035704
SPRY4	-0.035546
MIR4697HG	-0.035196
GABRA2	-0.034898
NT5E	-0.034259
GRAP	-0.033915
FAM83A	-0.032980
ERBB3	-0.032344
MCF2	-0.031006
STC1	-0.030814
GEM	-0.030480
CXCL2	-0.030430
B3GNT2	-0.030370
LEPREL4	-0.030316
INHBA	-0.030083
SERPINE1	-0.029890
AQP9	-0.029839
RP1	-0.029718
LINC01366	-0.029533
SPINK6	-0.029399
VLDLR	-0.029122
KCTD11	-0.028739
WNT5A	-0.028707
ADM	-0.028702
IRS2	-0.028607
DCBLD2	-0.028441
EFNB2	-0.028415
PTPN11	-0.028379
ITPR1	-0.028370
MYO10	-0.028296
FN1	-0.028285
RPL23AP53	-0.028214
PLD5	-0.028073
OSBP2	-0.027972
NAV3	-0.027951
ERVH-4	-0.027888
PGM2L1	-0.027482
C10orf10	-0.027407
HAND1	-0.027237
ANGPTL4	-0.027185
VEGFA	-0.026974
C2CD4B	-0.026650
SKIL	-0.026379
RPSAP52	-0.026307
TGFA	-0.025982
F3	-0.025856
TGM2	-0.025799
MAP4K4	-0.025692
BMP2	-0.025455
HS3ST3A1	-0.025455
P4HA3	-0.025422
MPRIP	-0.025291
MRGPRX3	-0.025120
NRIP1	-0.025072
MCF2L2	-0.025018
IL1B	-0.024921
KLF7	-0.024317
AREG	-0.024269
DAW1	-0.024250
CDCP1	-0.024123
PLAU	-0.024036
FAM20C	-0.024016
EGLN3	-0.023901
STK17A	-0.023748
STXBP5	-0.023684
CFHR4	-0.023678
GK	-0.023550
ENKUR	-0.023548
DNAJB5	-0.023511
RHOB	-0.023506
ANLN	-0.023465
SULT1B1	-0.023391
SAMD9	-0.023308
MIR600HG	-0.023266
PPARD	-0.023245
ANAPC10	-0.023156
KDM7A	-0.023084
CD101	-0.023041
HMGA2	-0.022935
ITGA5	-0.022930
TUBB2A	-0.022853
GCNT4	-0.022852
EREG	-0.022807
BCAP29	-0.022787
C10orf90	-0.022740
TRAK2	-0.022588
BMP6	-0.022489
LCE3D	-0.022479
TSPAN5	-0.022456
ARHGAP31	-0.022420
TMEM194B	-0.022385
LRRC8C	-0.022362
THSD4	-0.022299
CAPRIN2	-0.022242
CCDC88A	-0.022218
DMBT1	-0.022138
TRPC1	-0.022064
SNAI2	-0.022017
DUSP4	-0.021963
FERMT2	-0.021933
SLAMF9	-0.021843
ANXA3	-0.021795
FARP1	-0.021764
SLC26A2	-0.021676
TMEM156	-0.021640
LINC00935	-0.021516
SH2D2A	-0.021468
ATP2B4	-0.021446
NAV1	-0.021328
SERPINB2	-0.021244
JMJD1C	-0.021219
GPR88	-0.021161
INSM2	-0.021138
ZNF846	-0.021125
KCNJ15	-0.021043
ATP13A3	-0.021038
N4BP2	-0.020979
TMCC1	-0.020930
PMEPA1	-0.020877
MYO5A	-0.020873
FRMD4B	-0.020857
SRGAP1	-0.020841
RASA1	-0.020827
RPL23AP32	-0.020766
ATP2C2	-0.020760
ANTXR2	-0.020610
EGR1	-0.020609
RUFY2	-0.020571
ANKRD50	-0.020549
HILPDA	-0.020523
FBN1	-0.020518
CALM2	-0.020491
CTSV	-0.020464
KDELR3	-0.020453
MCM8	-0.020401
SCD5	-0.020360
PCDHB4	-0.020337
FAM209B	-0.020205
SMTN	-0.020172
MUC7	-0.020048
IQSEC1	-0.020015
JUN	-0.020011
INSC	-0.019969
ZNF25	-0.019938
PTPN12	-0.019931
SLC16A8	-0.019884
C12orf75	-0.019868
DUSP5	-0.019834
FLJ13744	-0.019821
LAMC2	-0.019773
MAMLD1	-0.019733
CPEB4	-0.019716
ENO2	-0.019684
NGEF	-0.019664
GCNT1	-0.019659
STAM2	-0.019558
FERMT1	-0.019555
ZNF818P	-0.019547
RAPH1	-0.019520
LPXN	-0.019494
DYNC1I2	-0.019489
MSANTD3	-0.019471
ATG16L1	-0.019427
CD248	-0.019333
GAB3	-0.019325
KIAA1841	-0.019321
SECISBP2L	-0.019249
PPP1R3B	-0.019238
MBOAT2	-0.019231
EML1	-0.019200
SLITRK6	-0.019173
TP53RK	-0.019134
OLFML3	-0.019106
SEPT7	-0.019088
TTC7B	-0.019061
IER3	-0.019056
EPB41L2	-0.019029
SPARC	-0.019002
RBMS1	-0.018953
HEPHL1	-0.018943
ERVFRD-1	-0.018898
LRRC4B	-0.018885
H3F3B	-0.018870
ETV4	-0.018853
RBM27	-0.018852
GK3P	-0.018794
CXCL8	-0.018767
MIR138-1	-0.018760
DDX10	-0.018750
DDX60	-0.018687
EXOC6B	-0.018663
LOXL2	-0.018656
GNE	-0.018649
SNORD61	-0.018605
IWS1	-0.018550
ZNF564	-0.018534
RASAL2	-0.018514
FOXA2	-0.018496
TMEM229A	-0.018412
LIPH	-0.018407
WDR47	-0.018397
TIAM1	-0.018367
CNGA2	-0.018354
COL6A3	-0.018346
MIR137HG	-0.018298
SLC22A31	-0.018272
HSPA13	-0.018269
SAMSN1	-0.018261
THUMPD3-AS1	-0.018251
GJC3	-0.018211
MGLL	-0.018166
LOC441601	-0.018135
C5orf24	-0.018135
ST3GAL1	-0.018124
KIF14	-0.018098
STRA6	-0.018083
FOSL1	-0.018045
DUSP6	-0.018037
ABO	-0.018013
ZSWIM6	-0.017985
LOC100506271	-0.017958
C5orf15	-0.017928
CCBE1	-0.017887
ESPL1	-0.017859
PCDHB2	-0.017833
THBD	-0.017812
AXL	-0.017794
KLF6	-0.017785
SPINK1	-0.017774
FAM177A1	-0.017748
UBE2N	-0.017725
BRIP1	-0.017711
MIR516B1	-0.017708
MAGEA12	-0.017661
SNORD14E	-0.017652
RAPGEF2	-0.017648
TMSB4X	-0.017613
XAGE-4	-0.017576
CA12	-0.017548
TACC1	-0.017540
PTHLH	-0.017529
RPGR	-0.017521
FHOD3	-0.017495
ZNF300	-0.017491
NIPAL1	-0.017443
CD24	-0.017440