!direction	0
!num_genes	500
!diffexp_method	chdir
!cutoff	500
!correction_method	None
!threshold	None
!organism	Homo sapiens
!organism	Homo sapiens
!cell	MCF10A 
!cell subtype	premalignant MCF10AT1k.cl2
!perturbation	TGFbeta treatment 
!concentration	5 ng/ml 
!time	1 hour
!disease	Breast cancer
!end_metadata
ID2	0.208932
ID1	0.179806
ID3	0.159592
SNAI1	0.134739
JUNB	0.131052
JUN	0.119083
SMAD7	0.113959
OVOL1	0.113568
SERPINE1	0.106210
BHLHE40	0.105377
DLX2	0.104832
CTGF	0.100115
HEY1	0.091540
SKIL	0.088712
MIR21	0.083231
DUSP1	0.082847
HES1	0.080188
GADD45B	0.077501
NOG	0.075166
KLF10	0.071227
BCOR	0.069761
CSRNP1	0.069521
PFKFB3	0.068212
CYR61	0.067046
SIK1	0.065057
VASN	0.064288
CYP24A1	0.063453
FOS	0.062104
HOXC11	0.060234
SMAD6	0.059711
PLK2	-0.058351
KCTD11	0.055275
C5orf46	0.054710
DLX3	0.052610
HOXC13	0.049935
DHRS3	0.049348
RDH16	0.048674
RNU5D-1	0.047896
IER3	0.046267
SNAI2	0.045561
PLAU	0.045551
MYC	-0.044039
EFNA1	0.044037
SPRY1	-0.043673
FAM43A	0.043504
MXD1	0.041358
BMF	0.041281
BHLHE41	0.041129
ZC3H12A	0.040862
MIR181B2	0.040221
DLX1	0.039964
WNT9A	0.039745
PIM1	0.039334
IER2	0.039266
VEGFA	0.038559
SGK1	0.038379
ARL4A	-0.037344
HMOX1	0.037005
LFNG	0.036877
EDN2	0.036581
SPSB1	0.036335
LOC344887	-0.036304
EGR1	0.036056
LBH	0.036018
SEMA7A	0.035590
IL1A	-0.035544
STX1A	0.034717
TXNIP	-0.034559
PMEPA1	0.034557
ZFP36L2	0.034411
TGIF1	0.034229
LIF	0.034055
PLEKHF1	-0.033770
EPHA2	0.033229
BCL2L11	0.032594
RNU5E-1	0.032556
JAG1	0.032239
IER5L	0.032072
ISL1	-0.031815
DUSP2	0.030943
FSTL3	0.030774
ANGPTL4	0.029589
LINC00052	-0.029260
MIR181B1	0.029214
RGS2	-0.029021
NFKBIA	0.029005
ETS2	0.028958
SCARNA6	0.028948
SH3BP4	0.028781
COL1A1	0.028760
BAMBI	0.028668
LAMB3	0.028445
SPRY4	0.028423
TFEB	0.028303
PDGFB	0.028278
ZBED8	-0.028041
MIR181A2	0.027854
FAM46B	0.027772
NET1	0.027769
CITED2	-0.027416
RNU4-1	0.027373
TUFT1	0.027244
FLRT3	-0.027006
C1orf106	0.026848
KDM7A	0.026834
RMRP	0.026685
S100P	0.026596
ADAMTS15	0.026591
CXCL2	-0.026504
USPL1	0.026470
AMIGO2	0.026290
IL1B	-0.026247
CHST3	0.026176
PHLDA1	-0.026089
TNS4	0.025980
SLC25A37	0.025943
SNORD1A	-0.025811
TBX3	0.025665
ARID3A	0.025494
PLAUR	0.025405
RARA	0.025036
MIR100	0.024681
PXDC1	0.024598
NUAK1	0.024532
SERTAD1	0.024375
RHOB	0.024342
SERTAD4	0.024209
TRIM48	-0.024142
TLE3	0.024097
SERTAD3	0.024056
ADAM32	-0.024043
MAP3K2	0.024023
ENC1	0.023998
KRT80	0.023927
ANP32A-IT1	-0.023911
ZNF284	-0.023889
IVNS1ABP	0.023694
MYEOV	0.023606
LRRC37B	-0.023417
LINC00341	0.023380
TYRO3	0.023283
RNU5A-1	0.023259
GDF15	0.023197
ARRDC2	0.023180
ZBTB2	0.023176
SNORD116-14	0.023151
ITGB4	0.023087
PTGES	0.023028
SMOX	0.022999
BNC1	0.022756
KLF13	0.022728
DNAJB4	-0.022652
CYP1A1	-0.022580
PRSS50	-0.022402
LOC100129033	-0.022374
SNORA45A	0.022316
MDS2	-0.022298
MIRLET7BHG	0.022297
DUSP10	0.022195
MIR23A	0.022101
PDP1	-0.022051
CEBPB	0.021980
LONRF3	0.021965
TM4SF19	0.021954
FLJ32742	0.021890
ZNF214	-0.021827
CDKN1A	0.021772
PTGER4	-0.021726
SEMA4C	0.021588
PIK3IP1	0.021583
MED27	0.021529
BMP2	0.021482
NRARP	0.021389
TRIM47	0.021233
ACTC1	0.021168
EPHB3	0.021154
ZBTB5	0.021116
LRRC8E	0.021111
HOXA9	0.021111
FLJ38773	-0.021099
SPHK1	0.021099
IFITM10	0.021086
FBXO32	-0.021085
RIPK4	0.021056
CENPQ	-0.020940
ITGA2	0.020934
RBM43	-0.020928
AMPD3	0.020897
FLJ38379	-0.020887
CYP4Z1	0.020819
CXXC5	0.020768
HAS2	-0.020761
LINC00634	-0.020687
FBXO5	-0.020659
GADD45A	-0.020658
LOC399900	-0.020652
TMEM88	0.020571
FOSL2	0.020566
SCARNA10	0.020522
LOC100131373	-0.020500
NMB	0.020473
FLJ16171	-0.020412
MIR134	-0.020393
ZSCAN2	-0.020327
DTWD1	-0.020260
GCNT1	0.020224
GRB7	0.020221
SERHL2	-0.020188
LOX	0.020161
SLC30A1	0.020146
SNORA33	-0.020138
FAM83G	0.019938
ESPNP	0.019765
ITPRIPL2	0.019762
GSE1	0.019744
VDR	0.019743
PLEKHA1	0.019725
SNORD13	0.019693
LPAL2	-0.019673
AP5B1	0.019594
PMP22	0.019560
REP15	-0.019558
EFNB2	-0.019550
TTC30B	-0.019516
ZNF431	-0.019502
HSD11B2	0.019442
TPM1	0.019374
RYBP	0.019360
TGFA	0.019335
TMC7	0.019332
MMP2	0.019314
SPIC	-0.019283
KLF4	0.019236
SNORA80A	-0.019209
WNT7B	0.019162
TIGD2	-0.019156
CEP19	-0.019142
TPT1-AS1	0.019140
TNFRSF12A	0.019052
LIMD1-AS1	-0.019033
PDGFA	0.018984
METRNL	0.018969
PHLDB1	0.018945
EGR2	0.018938
SCARNA12	0.018887
S100A1	-0.018877
ZNF217	-0.018865
LOC100132147	0.018804
ALOX5AP	0.018694
GEM	0.018691
KIAA0247	0.018646
KANK4	0.018599
RASA4	-0.018578
TIRAP	-0.018572
ZNF706	-0.018542
SOCS3	0.018524
RNF186	-0.018477
MIR29C	-0.018465
SNORD44	-0.018362
TIFA	-0.018302
SOX4	0.018293
LOC646903	-0.018268
NDC80	-0.018266
IL11	0.018262
SAP30	0.018235
ZNF285	-0.018201
PROC	0.018190
SYDE2	0.018160
CAMKK1	0.018106
CLCF1	0.018090
KLK6	0.018023
RASSF9	0.018021
HBEGF	0.018001
ST3GAL4	0.017979
DNAJC22	0.017965
IGHM	-0.017911
PER2	0.017906
PTHLH	-0.017904
PPARGC1A	0.017897
EXOSC4	-0.017886
CDC42EP1	0.017840
HSD3BP4	0.017812
KIAA1161	0.017809
SMURF2	0.017807
S100A3	0.017770
HS3ST3B1	-0.017759
LURAP1L	-0.017724
KRTAP10-2	0.017629
KIAA1551	-0.017622
ZNF630	-0.017584
RNF217	0.017552
BAG2	-0.017548
OR52K3P	0.017547
CDH22	-0.017541
TOR4A	-0.017512
CEBPZ	-0.017512
NOL4L	0.017511
TMSB4XP2	-0.017500
FGFBP3	-0.017451
FMN1	-0.017434
FAM161A	-0.017431
SPANXN2	0.017336
ABHD6	0.017329
GPR146	0.017286
CYP1B1	0.017254
ATG4C	-0.017250
MROH6	0.017186
OR10S1	-0.017150
MBTD1	-0.017142
MSX2	0.017105
SOX18	0.017099
CCDC112	-0.017090
SNORD78	-0.017089
GPR37	-0.017081
TGFBI	0.017065
IFIT2	-0.017050
VTCN1	0.017015
SPRR1B	0.016911
WNT5A	-0.016906
MAFF	0.016874
LOC728613	0.016841
KLK5	0.016839
SNORA22	0.016761
C10orf10	-0.016760
FRA10AC1	-0.016740
GPR4	-0.016729
FOXC2	0.016724
PLA2G10	0.016706
FOXO1	0.016704
MT1G	0.016694
ZNF432	-0.016662
TFCP2L1	0.016658
SULT1E1	-0.016652
SNORD116-20	0.016646
ATF3	0.016617
PCDHB9	-0.016603
GPRC5A	0.016552
EID3	-0.016512
LTBP2	0.016507
SNX29P2	0.016503
ING2	-0.016485
PTGFR	-0.016440
SCARNA11	-0.016434
ULK1	0.016395
NMI	-0.016381
LCA5	-0.016379
CD3EAP	0.016368
S1PR2	-0.016367
LRIF1	-0.016367
EIF4E	0.016361
C3orf33	-0.016330
LOC100131581	-0.016296
NKG7	-0.016244
MFSD2A	0.016238
MIRLET7A2	0.016234
OR1D5	-0.016229
UPF1	0.016192
CYP2U1	-0.016181
GOLGA5	-0.016156
SNORD33	0.016151
IRF2BP2	0.016131
MLXIP	0.016126
TNFRSF11B	-0.016101
IGSF3	0.016065
SPRY2	-0.016013
SNX33	0.016012
CYTH1	0.016005
ANKS6	-0.015998
FURIN	0.015994
ZNF57	-0.015990
NT5C3A	-0.015949
KLF7	0.015898
SNORD79	-0.015889
MYL7	-0.015848
LOC100132356	0.015835
TRIM50	-0.015827
SLC25A30	-0.015816
PSG4	-0.015732
ASB6	0.015731
LGALS9	-0.015725
AKR1B10	-0.015706
VTRNA1-3	0.015685
BBC3	-0.015677
TSKU	0.015668
FGF11	0.015640
BCL6	-0.015638
DNAJC21	-0.015614
RPSAP58	0.015608
FAM195A	-0.015607
LY86-AS1	0.015602
PEAR1	-0.015600
PGF	0.015549
ZNF92	0.015545
YRDC	0.015533
FUT9	0.015513
LIPG	0.015512
SPHK2	0.015510
LYL1	-0.015458
NDRG1	0.015448
NRSN2	0.015428
ZNF619	-0.015400
RAP1GAP2	0.015398
GLT8D2	-0.015397
AHNAK2	0.015383
LINC00312	0.015369
VRTN	-0.015333
RAB40B	-0.015331
LOC441268	-0.015331
SNX20	0.015310
C3orf52	0.015305
IFNLR1	0.015291
TSSK6	-0.015287
MEFV	-0.015257
KIAA1147	0.015252
WDR89	-0.015251
HOXB2	0.015251
TINAGL1	0.015248
ADRB2	-0.015219
IFFO2	0.015212
FAM174A	-0.015202
ARHGEF38	-0.015200
SNORD32A	0.015187
DMPK	0.015166
NUAK2	0.015130
CABLES1	0.015090
SKI	0.015086
GPR157	0.015059
ZNF529	-0.015024
S1PR5	0.015019
PDK4	-0.015010
UNC93A	0.015005
SLC39A14	0.014993
ERF	0.014983
SDPR	-0.014981
FLJ11710	-0.014967
ZNF703	0.014963
GPR119	-0.014953
LOC100506127	-0.014942
C15orf53	-0.014940
OR5C1	-0.014939
CHCHD7	-0.014939
NABP1	-0.014935
PAPL	0.014932
HIST1H2AJ	-0.014900
ADM	0.014834
SNORD50B	-0.014831
LOC100287896	0.014804
DCAF4L2	0.014802
CETN3	-0.014801
KIAA1656	-0.014797
HNRNPLL	-0.014782
DNAJC30	0.014781
MIR504	-0.014774
LOXL2	0.014771
KLF3-AS1	-0.014768
HSF2	-0.014765
BRMS1L	-0.014747
ZNF223	-0.014738
CLDN4	0.014734
GCLC	-0.014729
EML6	-0.014670
GZF1	0.014644
GNG4	0.014639
HYKK	0.014627
SCLT1	-0.014620
LYPLAL1	-0.014620
ZBTB1	0.014601
KLF6	0.014582
HEG1	0.014579
SWT1	-0.014567
DEFB128	-0.014567
ENGASE	0.014566
ZNF607	-0.014565
MISP	0.014553
ACRC	-0.014542
PHAX	-0.014540
SESTD1	-0.014537
APOOL	-0.014537
IRF1	0.014533
SLC2A3	-0.014475
C17orf99	-0.014474
PRR5L	0.014459
INTS4	0.014455
PPP1R13L	0.014440
PITX3	-0.014423
NFIL3	-0.014415
FAU	0.014415
UPK3A	-0.014405
TSPEAR	-0.014336
TMEM176A	-0.014310
DCBLD1	0.014309
CALCA	0.014307
RASGEF1B	0.014306
CEBPG	0.014306
LHX3	-0.014304
DHX36	-0.014304
IFT88	-0.014291
FASN	0.014282
AMOTL2	0.014269
FGF5	-0.014263