!direction 0 !num_genes 500 !diffexp_method chdir !cutoff 500 !correction_method None !threshold None !organism Homo sapiens !cell Substantia nigra !perturbation Braak stage 4 !disease PD !end_metadata RPL3 0.103294 GUCD1 0.096982 CNBP 0.079579 UAP1L1 -0.069678 IRF5 -0.068212 FZD5 0.062279 CSE1L-AS1 0.062228 TUBGCP6 -0.061884 CRBN 0.061155 NR4A1 0.059446 TMA16 -0.058448 GDNF -0.055608 THEG 0.055130 C7 0.054360 TMED10P1 0.053929 TMEM217 0.051787 NACAP1 0.051644 TSSC4 -0.051381 ZDHHC17 0.048918 CCDC28B 0.047159 PIK3R1 0.047092 MPHOSPH8 0.046267 RAI14 0.046031 DUSP6 0.044314 JUN 0.044107 DLK1 -0.043809 RASGRP3 0.043331 ARL13B 0.043306 ST18 0.043209 PVALB 0.043073 TANGO2 0.043016 TTF1 0.042010 PMP2 0.041994 ARID3A 0.041894 CPNE6 -0.041426 POLR3H -0.040250 BAZ2B 0.039727 TSPAN15 0.039295 PCGF5 0.038845 SV2C -0.038415 PLA1A 0.038060 RPS14 -0.037696 MMP9 -0.037656 SMA5 0.037560 ARTN -0.037525 CCBL2 0.037425 C2CD4B 0.037414 RICTOR 0.037380 MAN2A1 0.037042 MAP4K5 0.037007 FRG1B 0.036917 MCL1 0.036801 CLIC4 0.036506 IFI44L 0.036299 NAP1L3 0.036190 NT5DC1 0.036045 C2orf27A 0.035966 SHC4 0.035941 DLAT -0.035865 RUNDC1 0.035821 DYNC1LI2 0.035806 TXLNG 0.035598 ZNF644 0.035465 EPM2A 0.035434 ANKRD36 0.035331 ZFYVE16 0.035313 ZNF304 0.035107 MTCH1 -0.035031 EIF5B 0.034866 CPEB4 0.034687 LOC730102 0.034385 MYBL1 0.034176 MEIS2 0.033862 CCDC88A 0.033807 NKAIN2 0.033794 SFRP1 0.033773 RASA2 0.033704 MYO1B 0.033630 CYP1B1 0.033594 PAX4 0.033409 KCNJ10 0.033330 MCM8 0.033305 UFM1 0.033277 PPIEL 0.033273 TRIM2 0.033197 BMI1 0.033112 KIT 0.033064 RHBDD2 -0.032879 FRYL 0.032878 HN1L 0.032860 RASSF8 0.032777 KLHL5 0.032505 CCDC144B 0.032487 SRRM1 0.032401 MPP5 0.032357 ALK 0.032344 PIGA 0.032333 ZNF292 0.032306 CLK4 0.032252 PGM5 0.031710 MAP3K2 0.031655 NCBP2-AS2 -0.031514 IGIP 0.031385 RHO 0.031364 COL4A5 0.031325 PCP4L1 0.031317 SEPT7 0.031220 BCLAF1 0.031207 RTN2 -0.031198 SLK 0.031038 LRRC55 -0.030990 ATG4C 0.030917 ZFX 0.030909 KLHL4 0.030842 ROCK1 0.030748 FPGT 0.030712 NFYB 0.030670 STARD13 0.030654 MPRIP 0.030607 TSPAN7 -0.030518 ZNF83 0.030450 DPY19L1 0.030436 INTU 0.030400 MORC3 0.030267 FNIP2 0.030225 ELOVL7 0.030220 NEURL1 -0.030154 TARSL2 0.030078 ANP32B 0.030011 BCL6B 0.029979 SPDL1 0.029868 KLHL32 0.029848 LOC100996342 -0.029822 TUNAR 0.029819 FAR1 0.029817 PLSCR4 0.029782 KAT2B 0.029752 RBMXL1 0.029738 ADD3 0.029708 SPACA3 0.029697 SERBP1 0.029651 ERO1L 0.029633 LOC100506725 0.029570 USH1C 0.029496 CBFB 0.029479 POMGNT2 -0.029446 JAK3 -0.029394 TYMS 0.029352 FOXO4 0.029291 NTN1 -0.029258 CHMP2B 0.029248 ARHGEF37 0.029244 CAV1 0.029230 MYO6 0.029183 KIAA1147 0.029125 MTSS1 0.029105 RAB43 -0.028990 ATP13A2 -0.028957 RNF138 0.028927 COL23A1 -0.028871 MIF-AS1 -0.028864 STAG2 0.028777 HERC2P2 0.028771 NSRP1 0.028676 SP100 0.028667 FGFR2 0.028659 UGT8 0.028626 MCTS1 0.028614 TNRC6C 0.028610 PCM1 0.028608 MORC2-AS1 -0.028606 KLHL2 0.028591 CCNL1 0.028549 AGAP7P 0.028547 DEK 0.028479 CDKN1B 0.028454 RSRP1 0.028424 MSL1 -0.028405 PABPC3 0.028399 LAMB1 0.028390 LIFR 0.028375 PTK2 0.028362 ARHGAP21 0.028351 NSG1 -0.028296 CELF3 -0.028288 HMGN5 0.028264 SYNJ2 0.028258 SOS2 0.028195 TNFSF10 0.028172 IVNS1ABP 0.028139 ARHGEF1 0.028115 PTH1R -0.028101 LBX2-AS1 -0.028072 S1PR5 0.028072 SLCO1A2 0.028035 ZNF704 0.028010 SRGN 0.027957 ZZZ3 0.027937 GAL 0.027890 EVI2A 0.027882 ZNF638 0.027858 FBXL3 0.027844 SMIM10 0.027811 ZNF714 0.027765 ZNF326 0.027735 ARL6IP6 0.027691 STARD3 -0.027688 BAZ1A 0.027667 SMC6 0.027543 PDE4C 0.027533 CSDC2 -0.027532 UACA 0.027470 GBF1 -0.027457 B4GALT2 0.027450 CCNG1 0.027421 APIP 0.027410 MEX3C 0.027408 HSPA2 0.027376 NOMO1 -0.027367 WDR5 -0.027365 SNAP25 -0.027335 ATL1 0.027278 SYNGR3 -0.027267 ZSCAN10 0.027243 PAPOLG 0.027243 STRN 0.027193 CABP1 -0.027186 NCKAP5 0.027182 MOBP 0.027163 ABAT -0.027138 BCO2 0.027130 TBC1D31 0.027121 CLEC2B 0.027050 ACHE -0.026982 SYNM 0.026980 CWC22 0.026947 ELF2 0.026916 KCNJ2 0.026914 CDK19 0.026911 DENND2A -0.026899 ARAP2 0.026842 LIMA1 0.026790 LINC00626 0.026776 TAF1 0.026768 KTN1 0.026726 ZNF404 0.026672 IMPDH1 -0.026576 TRAM2-AS1 0.026556 NBPF1 0.026500 MAPK8IP2 -0.026485 SORCS3 0.026484 SNAP91 -0.026471 PHLDA2 -0.026454 ZCCHC24 0.026413 RGPD2 0.026342 RAD50 0.026333 KCTD3 0.026305 EPC1 0.026303 VEGFC 0.026303 RNF219 0.026295 AGTPBP1 0.026180 RB1CC1 0.026162 SEC23A -0.026147 RGS12 -0.026105 WDSUB1 0.026100 PCNXL4 0.026091 URI1 0.026020 CLIC5 -0.025995 OFD1 0.025989 CAND1 0.025914 CEP97 0.025886 SDHAP1 -0.025847 UFL1 0.025829 INTS6 0.025819 CSNK1G2 -0.025755 TMEM173 -0.025721 LRFN3 -0.025720 LOC645513 0.025706 ITGA6 0.025691 LARP7 0.025651 PLBD2 -0.025626 MTMR6 0.025619 CALD1 0.025615 NPTN -0.025601 MDM2 0.025590 FNDC3A 0.025574 ZNF25 0.025562 PELP1 0.025560 PIN1 -0.025555 ACOT7 -0.025492 CHGB -0.025476 SPG20 0.025451 KRT18 -0.025330 CCDC112 0.025309 LGR6 -0.025256 MBD4 0.025249 ABHD8 -0.025243 NR2C1 0.025228 LDLRAD4 0.025197 PHF20 0.025175 CWC27 0.025155 LOC101927181 0.025118 FGD5-AS1 0.025054 FTCDNL1 0.025039 EDRF1 0.025036 C10orf54 -0.025024 ZNF23 0.025021 B3GALNT2 0.025013 LIX1L -0.025000 LINC00938 0.024987 C4B -0.024972 IFI16 0.024961 SEC63 0.024954 CAPN3 0.024951 MRAP2 -0.024935 C18orf54 0.024923 HNRNPA2B1 0.024923 EIF3C -0.024917 MED13L 0.024910 TMEM123 0.024846 PRDM11 -0.024805 HNRNPU 0.024792 PTOV1 -0.024769 ZNF281 0.024754 ARHGEF12 0.024691 ARHGAP19 0.024683 NTN4 0.024668 LINC00667 0.024603 APEH -0.024523 LRP2BP 0.024513 JUNB 0.024505 BEAN1 0.024503 ENOPH1 0.024502 SLC25A11 -0.024489 LRRC8A -0.024467 LAMP2 0.024443 MUT 0.024426 PARP4 0.024401 TTC37 0.024377 TCTE3 0.024372 CD164 0.024333 LRP1 -0.024327 P2RX5 -0.024320 HNRNPH3 0.024272 BRCA1 0.024253 CHRNB2 -0.024250 KLF16 -0.024250 ANKRD36BP2 0.024222 PCK2 -0.024210 HES1 0.024186 SLC44A1 0.024158 RPL7 0.024147 CHD1L 0.024141 SOX2-OT 0.024115 C16orf93 -0.024110 RPL9 0.024090 NR3C1 0.024070 STK39 0.024068 LOC100131262 0.024037 SAP18 0.024019 SPX 0.024017 SPOPL 0.023991 NT5C3A 0.023981 FAM115A 0.023971 PKM -0.023971 RMDN1 0.023968 CASP8AP2 0.023932 STAMBP 0.023919 CNTNAP4 0.023918 C15orf27 -0.023890 CCL2 0.023877 LINC00312 0.023876 CNKSR3 0.023871 SREK1 0.023847 TRIP4 0.023846 GCC2 0.023843 CA2 0.023831 BOD1L1 0.023822 GPR153 -0.023822 FBXW5 -0.023818 LOC389831 0.023805 MOB1B 0.023762 GPT2 0.023750 BST2 0.023739 LOC286161 0.023733 LPXN 0.023731 AP3D1 -0.023649 ADAT3 -0.023649 ZNF143 0.023643 RGS4 -0.023628 ZNF14 0.023625 HPS6 -0.023580 FAM204A 0.023578 VPS54 0.023578 F12 -0.023558 PPP2R1A -0.023541 SCO2 -0.023499 SFPQ 0.023463 ANKRD18A 0.023442 GPBP1 0.023424 C1QTNF4 -0.023415 FBRSL1 0.023399 ORC4 0.023376 SPAG5 0.023305 TANC1 0.023254 SCRN3 0.023250 NUDT13 0.023240 MT1JP -0.023217 EPHA5-AS1 -0.023205 SARDH 0.023189 AR -0.023186 CASP3 0.023172 CHD9 0.023157 WBP5 0.023119 LDHD -0.023085 SPAG9 0.023066 C2CD5 0.023045 TMEM8B -0.023028 GSTT2 0.022995 CRNDE 0.022993 SPTSSA 0.022990 LIN9 0.022989 RFTN2 0.022975 VAMP3 0.022968 RPL22 0.022957 TGDS 0.022902 CTGF 0.022895 CCPG1 0.022845 PWWP2B -0.022844 LOC389765 0.022838 WDHD1 0.022830 CENPC 0.022814 ZMAT4 0.022805 STARD9 0.022800 DDX24 0.022788 GSTM5 -0.022776 LOC283788 0.022752 TREX1 -0.022746 MBNL1 0.022737 PIGQ -0.022718 RBM11 0.022715 E2F6 0.022700 RAB3IP 0.022695 CNOT2 0.022679 SEC11A 0.022679 PHF3 0.022672 ENOX2 0.022666 MANBAL -0.022651 AZIN1 0.022647 ENO1 -0.022624 CPPED1 0.022612 SBDS 0.022565 CBLB 0.022548 AES -0.022536 PLEKHG5 -0.022509 SNRNP48 0.022500 OPCML 0.022499 CTSB -0.022499 SECISBP2 0.022488 KIZ 0.022443 PIANP -0.022442 GALNT15 0.022441 GNAZ 0.022440 TMEM98 0.022422 TRIM36 0.022417 SAMD8 0.022402 EIF3E 0.022390 LSM14A 0.022385 CDCA7L 0.022321 RIIAD1 -0.022314 CARD10 -0.022307 ZNF280D 0.022262 PARD6A -0.022246 UPF3B 0.022232 PITPNM2 -0.022231 EXOSC9 0.022229 HMGXB4 0.022229 REPIN1 -0.022226 POC5 0.022209 PRKAB2 0.022198 SYT17 -0.022195 KIAA1731 0.022191 SNURF -0.022176 RBMX 0.022172 TRIM33 0.022166 AKR1C3 0.022164 GPR37 0.022162 SLC8A2 -0.022145 NCS1 -0.022117 CCDC144A 0.022092 CDC5L 0.022066 PDE2A -0.022047 TSPAN10 0.022037 GOLT1B 0.022023 LYSMD3 0.022023 ITGAV 0.022012 PICALM 0.022011 NASP 0.021971 FEZ2 0.021960 ADAMTS13 0.021959