!direction	0
!num_genes	500
!diffexp_method	chdir
!cutoff	500
!correction_method	None
!threshold	None
!organism	Homo sapiens
!cell	GIST Tumor
!perturbation	Imatinib  600mg daily by mouth - 8-12 weeks
!end_metadata
FOSB	0.080206
NR4A1	0.075965
RERGL	0.065812
EGR1	0.060927
MMP1	-0.060140
EGR3	0.058394
EGR2	0.058159
GEM	0.057204
BTG2	0.055835
CYR61	0.053306
ZFP36	0.052970
AMOTL2	0.052318
TMEM154	-0.051792
LOXL2	-0.049613
REEP1	0.048711
SEPP1	0.046925
PRKCQ	-0.046214
ZNF157	0.045597
OGN	0.045176
GTPBP4	-0.044611
FRY	0.043876
LOC100128164	0.043602
TAGLN	0.043259
MAFB	0.043250
CDR1	0.042908
RGS1	0.042344
CKAP4	-0.042131
PRH1	0.041761
DUSP1	0.041518
NPNT	0.040338
APOC1	0.040206
KLF9	0.039178
ADH1C	0.038682
TESC	-0.038646
GPIHBP1	0.038530
ADIRF	0.038421
RCAN2	0.038380
FAM107A	0.038229
CRYAB	0.038198
NEXN	0.038149
CCNE1	-0.037839
TSPAN5	-0.037007
PPP1R3C	0.037003
ALAS2	-0.036903
BPGM	-0.036668
TSC22D1	0.036444
RNF150	0.036404
ACTA2	0.035990
GATM	0.035623
TARS	-0.035309
TNFRSF14	-0.035279
TMED7	-0.035144
HLA-DMA	0.035090
SPCS3	-0.034905
PF4V1	-0.034900
PSKH1	-0.034569
SFRP4	0.034300
MYLK	0.034290
PRELP	0.033747
CPE	0.033572
AR	0.033555
SLCO2B1	0.033192
CREB3L1	-0.033180
GREM1	0.033148
PMP22	0.033083
C1orf198	0.032935
RAB33A	-0.032863
NES	-0.032752
PHACTR2	-0.032036
COPB2	-0.031961
VCAN	-0.031830
AP5S1	-0.031830
C20orf24	-0.031642
ATP1A2	0.031597
SPRY1	0.031436
SLC25A22	-0.031272
SLC16A3	-0.031211
ADH1A	0.031193
PLSCR4	0.031153
EMC8	-0.031139
CCL3L3	0.031105
XCL1	-0.031061
EMC3	-0.030815
C1QBP	-0.030800
MED31	-0.030710
LAMP3	-0.030538
HLA-DRA	0.030472
TRMT10C	-0.030460
CHST2	-0.030295
CCL18	0.030290
AIFM1	-0.030253
DCLK2	0.029988
GPNMB	0.029961
PROK2	-0.029716
DEFA3	-0.029674
PENK	-0.029520
DAGLA	-0.029500
ITGB1BP2	0.029444
JUN	0.029416
BASP1	-0.029111
GSTO1	-0.028982
FHL1	0.028858
PDCD5	-0.028716
HIST1H4B	-0.028714
H19	0.028708
CKS2	-0.028637
HLA-DRB4	0.028629
ATP5E	-0.028607
SYNPO2	0.028577
LZTS1	-0.028571
CHD1L	-0.028483
HIST1H3C	-0.028480
CDKN2D	-0.028375
SLFN5	-0.028263
NUSAP1	-0.028204
TACR1	0.028108
LAMB1	-0.028050
LPL	0.028011
ANO8	-0.027744
IL1B	-0.027626
RTP4	-0.027517
F2R	-0.027502
ZNF385D	0.027375
METTL7A	0.027374
RAI2	0.027304
TM9SF2	-0.027266
MEF2C	0.027162
LMNB2	-0.027139
FGF14-AS2	0.027139
MANF	-0.027092
XKR8	-0.027087
OST4	-0.027070
PLCXD3	0.027023
MAOB	0.026972
ACTC1	0.026895
SERF1A	-0.026852
SAA1	0.026837
NNMT	0.026770
SMIM3	-0.026752
CTSL	-0.026693
B3GAT2	-0.026672
NPHP4	-0.026650
DUSP6	-0.026644
NUP62	-0.026643
RAB20	0.026631
DIRAS1	0.026621
MAP2K3	-0.026582
GTPBP8	-0.026579
THBD	0.026546
CXCL1	-0.026544
FBXO32	0.026539
ADAMTS5	0.026521
MGP	0.026501
LONRF2	0.026493
HIST1H4L	-0.026457
USP53	0.026434
MPZL3	-0.026393
AKR7A2	-0.026367
TPI1P2	-0.026339
PPAP2A	0.026244
RECQL	-0.026100
CXCL8	-0.026058
CNTFR	-0.026016
FBXO41	-0.025963
EBNA1BP2	-0.025935
CAV1	0.025908
SQLE	-0.025886
ATP8B4	0.025870
GUK1	-0.025865
ANG	0.025847
EDN1	0.025845
C10orf10	0.025799
ACTBL2	0.025786
NET1	0.025777
PNRC1	0.025707
CCL20	-0.025661
MPDU1	-0.025641
AMPD3	-0.025612
GDF10	-0.025471
CIT	-0.025396
TRAF3	-0.025347
RACGAP1	-0.025305
MT1M	0.025243
HSPA4L	-0.025186
FBXO7	-0.025183
ERRFI1	0.025139
HIST1H3E	-0.025060
FAM136A	-0.025034
NPTX2	0.024996
KIF2A	-0.024975
CBR1	-0.024968
WIPI1	-0.024869
MRPS34	-0.024848
SPRY4	-0.024835
RGS5	0.024781
PLN	0.024722
PFDN4	-0.024623
CEP55	-0.024623
COL8A2	0.024615
APOLD1	0.024612
BIRC5	-0.024594
NOTCH3	0.024588
FNIP2	0.024581
KLF10	0.024554
ZHX2	0.024462
NT5C3A	-0.024429
SLC25A39	-0.024412
ICT1	-0.024405
FRZB	0.024386
INCENP	-0.024365
IER2	0.024311
SNHG16	-0.024279
ACTRT1	0.024197
MYRIP	0.024185
ABHD13	-0.024144
FIBIN	0.024138
ADPRM	0.024080
KCNA5	0.024047
COPS3	-0.024034
C6orf165	0.023994
ATP6V0B	-0.023926
FANK1	-0.023899
PER2	0.023895
MIR100HG	0.023880
SLC39A8	-0.023855
HOXC10	-0.023852
REPS1	-0.023791
TBPL1	-0.023767
COX6B1	-0.023741
LOC100507642	0.023692
COX17	-0.023658
PLEK	-0.023624
TPD52L2	-0.023613
COLGALT2	0.023561
FOS	0.023517
BMP5	-0.023509
WNT5A	-0.023477
MINOS1	-0.023472
CCZ1B	-0.023428
MAP1B	0.023425
TGFBI	-0.023390
EMC7	-0.023380
LOC101927550	0.023279
DTL	-0.023274
F13A1	0.023272
BAG1	-0.023268
ZNF71	-0.023268
CLPTM1L	-0.023136
COMMD8	-0.023125
FKBP10	-0.022988
AGER	-0.022966
MRPS2	-0.022905
PEX13	-0.022885
HMMR	-0.022840
ZNF671	0.022832
SCYL3	-0.022818
JDP2	0.022792
NFASC	0.022779
TMEM147	-0.022690
DSTN	0.022681
OGFRL1	-0.022680
GLRX	-0.022671
ITPRIP	0.022653
C1orf53	-0.022614
TARID	-0.022605
HIST1H3H	-0.022585
PSMG1	-0.022542
BOLA3	-0.022530
BCL3	0.022528
CWC22	0.022523
PELI3	0.022497
KRT1	-0.022488
SCYL2	-0.022478
SERPINE1	0.022413
SBDSP1	0.022361
CTGF	0.022359
ERVH-4	-0.022311
CCT6A	-0.022292
HLF	0.022219
ADTRP	-0.022138
PRKCQ-AS1	-0.022113
TGIF1	0.022100
ADAM10	-0.022096
EMP1	0.022090
F2RL2	-0.022077
C11orf48	-0.022052
SP110	-0.022048
ZNF124	0.022033
NMI	-0.022028
MAP3K5	0.021983
PROS1	0.021944
NIT2	-0.021935
HBD	-0.021926
OAZ1	-0.021911
RAB43	-0.021880
ZBTB4	0.021810
KIAA0020	-0.021779
AGFG1	-0.021753
CDC27	-0.021747
CDO1	0.021738
HDAC2	-0.021711
BOD1	-0.021640
SATB1	0.021636
LOC100506282	0.021627
MPV17L2	-0.021617
DDC	0.021591
PREP	-0.021536
MAGED1	-0.021534
RCAN1	0.021533
TNFAIP1	-0.021522
RSPO3	0.021421
HBB	-0.021388
RRS1	-0.021381
CCDC127	-0.021367
RDH14	-0.021359
HSPA9	-0.021355
UCP1	-0.021347
PF4	-0.021290
FBXO33	-0.021283
CCT4	-0.021202
LRRC59	-0.021164
SRD5A1	-0.021161
MRPL47	-0.021151
PRPF39	-0.021138
ZNF436	-0.021136
RFX2	0.021114
ADCYAP1	-0.021091
NOTCH2	0.021089
GAPDHP62	-0.021088
RPA3	-0.021063
AOC3	0.021057
CCDC173	0.021041
MALAT1	0.021041
ARF4	-0.021033
KCNS3	0.021025
ATP5H	-0.021024
CDH3	0.020997
SOCS3	0.020996
TIMM8B	-0.020980
KDELR2	-0.020968
FZD7	0.020943
ABRACL	-0.020936
GLRX5	-0.020927
S100A8	-0.020905
LGSN	0.020890
LOC100130331	0.020871
RARS	-0.020860
LOC100507311	0.020836
TPI1	-0.020816
C16orf95	-0.020816
UBE2E2	0.020807
UPF1	-0.020800
FBN1	-0.020767
CXCR4	0.020760
TUBB3	-0.020759
ABI3BP	0.020757
NDUFAF7	-0.020756
SSR4	-0.020755
MRVI1	-0.020750
SLC29A1	0.020717
SH3BGRL3	-0.020701
SPOCK1	0.020698
AAGAB	-0.020696
MMP10	-0.020680
NEDD9	0.020677
SLC5A3	0.020643
SUSD3	-0.020634
CCDC85A	0.020605
PRDX4	-0.020590
FOXL2	-0.020583
RGCC	0.020558
IGFBP2	-0.020557
MYOC	0.020550
HOTAIRM1	-0.020549
HOXA7	-0.020538
LMCD1	0.020535
ID2	0.020497
LMO4	-0.020487
LLPH	-0.020481
OR51E2	0.020477
NELL1	-0.020473
STK17A	-0.020468
NME1	-0.020459
C1S	0.020449
ADD3-AS1	-0.020448
C2CD2L	-0.020436
BZRAP1	0.020408
NOP16	-0.020362
KAT7	0.020358
EDN3	-0.020314
TBL2	-0.020293
SIPA1L2	-0.020288
PLAT	-0.020286
CAPN1	-0.020275
E2F3	-0.020259
ACTG2	0.020234
AGO2	-0.020221
DUSP8	0.020216
SLC35F3	-0.020155
CLEC11A	-0.020150
GABPA	-0.020143
FABP5	-0.020135
EIF6	-0.020105
TMEM208	-0.020104
COL16A1	0.020066
DPP10-AS1	-0.020061
IPCEF1	-0.020052
SESN3	0.020033
DCUN1D5	-0.020033
MEOX2	0.020022
THBS1	0.020015
EME1	-0.020005
CUL7	-0.019998
DEF6	-0.019996
ATP1B2	0.019986
C4orf3	0.019970
ADIPOR1	-0.019965
AKAP8	-0.019955
LINC01420	-0.019937
ARMCX5	-0.019931
ARPC2	-0.019911
PPT2	-0.019898
PRDX5	-0.019898
GAPDH	-0.019892
TIMM50	-0.019880
PPIL1	-0.019862
SUSD1	-0.019858
ZAK	0.019852
KCTD8	-0.019847
CD9	0.019844
NIPSNAP3A	-0.019844
YIPF4	-0.019837
SSPN	0.019826
HEPH	0.019736
COA6	-0.019730
ALDH1A1	0.019729
ADH1B	0.019691
PALMD	0.019689
HMOX1	0.019684
XCL2	-0.019636
NUCB2	-0.019631
PECAM1	0.019586
TXNDC17	-0.019543
LOC157562	0.019521
CCDC3	0.019483
ABT1	-0.019480
RNF122	0.019469
NDUFA7	-0.019460
HIST1H3I	-0.019447
SORBS1	0.019446
DCUN1D3	0.019417
SOX17	0.019410
CTPS1	-0.019409
GEMIN6	-0.019392
GNE	0.019366
HLA-DRB5	0.019348
GRK5	-0.019345
KRT37	-0.019337
TMEM200A	-0.019335
SURF4	-0.019334
LGALS3	0.019311
HTR7	0.019307
ORMDL2	-0.019289
BOLA2B	-0.019288
ABCG2	0.019285
RGN	0.019272
KIAA0355	0.019231
GPR137B	0.019230
TCEAL6	0.019223
PKM	-0.019219
CXCL12	-0.019209
ZNF264	0.019197
CEBPB	0.019197
THSD4	0.019196
LAS1L	-0.019168
AGTPBP1	-0.019159
MAEA	-0.019159
TPD52L1	0.019150
SMOX	-0.019146
C1GALT1C1	-0.019145
FXYD1	0.019142
FAM86EP	-0.019138
C17orf89	-0.019134
PGAM1P5	-0.019120
CPXM2	0.019117
HIST1H4C	-0.019113
NDUFAB1	-0.019112
CNIH3	-0.019104
CISD1	-0.019089
NQO1	-0.019085
PZP	0.019084
GJB4	-0.019083
TBC1D9B	-0.019082
PCDHB10	0.019079
HSPA2	0.019079
LINC00944	-0.019061
CYP1B1	-0.019044
TSFM	-0.019033
LOC284454	0.019028
FAM155A	0.019026