!direction	0
!num_genes	500
!diffexp_method	chdir
!cutoff	500
!correction_method	None
!threshold	None
!organism	Homo sapiens
!organism	Homo sapiens
!cell	MCF10A
!cell subtype	highly malignant, metastatic MCF10Ca1a.cl1 
!perturbation	TGFbeta treatment 
!concentration	5 ng/ml  
!time	1 hour
!disease	Breast cancer
!end_metadata
SERPINE1	0.192187
ID1	0.153563
ID2	0.138310
JUNB	0.134569
ID3	0.122717
SMAD7	0.121345
DLX2	0.112938
SKIL	0.098022
CTGF	0.094757
JUN	0.094500
MYC	-0.089473
SEMA7A	0.089320
MIR21	0.088288
SNAI2	0.086623
SNAI1	0.080072
PLK2	-0.074706
OVOL1	0.069963
SIK1	0.069610
VASN	0.069109
ETS2	0.067343
HES1	0.066650
BHLHE40	0.066312
TGFBI	0.065110
KLF10	0.059312
PLAU	0.058874
BMF	0.055055
PXDC1	0.054665
TGIF1	0.052856
SPRY1	-0.052536
FAM43A	0.048990
DUSP6	-0.048434
MIR30C2	-0.047968
FOS	0.047202
HOXC11	0.046379
CXCL8	-0.045625
KCNK5	0.045440
NOG	0.045180
GADD45B	0.045084
EDN2	0.044874
MIR221	-0.044375
SPSB1	0.044345
CSRNP1	0.043780
PFKFB3	0.043616
JAG1	0.043477
IER3	0.043181
ZFP36L2	0.042272
PMEPA1	0.041991
DLGAP1-AS1	0.041850
BCOR	0.041572
RARA	0.041337
C5orf46	0.041217
ISL1	-0.040176
MIR181A2	0.039908
ITPRIP	0.039718
FLJ45950	0.039556
ZC3H12A	0.039392
PDGFB	0.037894
FLRT3	-0.037854
TUFT1	0.037689
KCTD11	0.037612
DKK1	-0.036340
BAMBI	0.035965
PIM1	0.035142
EFNA1	0.034994
AMIGO2	0.034700
RNU5A-1	0.034462
ADCY10P1	-0.034311
EGR3	0.034077
GRHL3	0.033946
PDK4	-0.033618
KRT80	0.033601
IGLON5	0.033467
WNT9A	0.033409
RNU4-2	0.033403
KLF5	-0.033021
TXNIP	-0.032931
LOC344887	-0.032919
FLJ25715	-0.032822
BCL6	-0.032680
PLEKHF1	-0.032449
RNU4-1	0.032365
BCL2L11	0.032342
RIPK4	0.032294
ARL4A	-0.032243
CHST3	0.032229
CYR61	0.032144
VEGFA	0.031663
LURAP1L	-0.031072
PHLDA1	-0.031034
ANGPTL4	0.030611
RHOB	0.030589
LFNG	0.030496
EPHB3	0.030476
NET1	0.030416
DHRS3	0.030405
ARID5A	0.030052
DUSP1	0.029502
CITED2	-0.029480
LOC100287896	0.029214
FAM230B	-0.029194
SKI	0.029040
TRPV6	0.029024
ZNF703	0.028822
ANP32A-IT1	-0.028727
SPRY2	-0.028679
PTGS2	0.028526
ZNF217	-0.028288
LINC01356	0.028231
SMAD6	0.028006
SERTAD4	0.027948
BHLHE41	0.027905
TLE3	0.027760
TNFRSF11B	-0.027737
STX1A	0.027709
IER5L	0.027592
PPP1R3B	0.027577
NFKBIZ	-0.027451
C1orf106	0.027275
LOC100134822	-0.027197
LINC00472	-0.027140
MYB	-0.026944
PP13004	-0.026938
MIRLET7BHG	0.026887
IFIT2	-0.026712
TUBA3E	-0.026633
SNORA49	0.026601
TNS4	0.026492
GEM	0.026377
RASGEF1B	0.026159
SNORD116-2	0.026127
FRMD4B	-0.025821
LTF	-0.025629
GK3P	0.025351
TFCP2L1	0.025089
SEPT5-GP1BB	-0.024769
MMP16	-0.024709
ZNF75D	0.024684
C3orf79	0.024425
CLCF1	0.024208
LAMB3	0.024084
FLRT2	0.024082
PTGER4	-0.024056
LINC00116	0.023964
FAP	0.023950
KLF6	-0.023882
PRICKLE1	-0.023787
ITGA2	0.023561
NOVA2	0.023552
FLJ44896	-0.023525
KDM6B	0.023394
SNORA22	0.023370
KLF4	0.023278
NR4A2	-0.023141
CYTH1	0.022966
EIF1AD	0.022957
IFITM2	-0.022845
HOXA5	-0.022638
KIAA0247	0.022602
FLJ30064	0.022566
GADD45G	0.022480
DCAF4L1	-0.022462
IGFBP7	-0.022341
MFSD2A	0.022311
ADAMTS15	0.022229
THAP7	0.022209
ZNF397	-0.022192
NACC2	0.022131
OR10S1	-0.021937
P2RY2	0.021893
ATF3	0.021892
TRAF3IP2	0.021807
C1GALT1	0.021791
MIRLET7A2	0.021775
AP5B1	0.021685
GJA8	-0.021626
MIR181B2	0.021611
RFX3	0.021584
SNORD116-14	0.021571
LOC100131826	-0.021538
USPL1	0.021531
RNA18S5	0.021494
C3orf52	0.021469
CYP4A22	-0.021270
PPP1R3F	0.021266
PLXDC1	-0.021190
TIGD2	-0.021160
F3	0.021155
WEE1	0.021107
SNORD13	0.021080
CDC14C	0.021053
OR52K3P	0.021008
ZBTB39	0.020974
CEP170P1	-0.020839
ENC1	0.020810
AHNAK2	0.020793
KCTD4	-0.020732
SNORA70E	-0.020674
OR2B11	0.020567
SNORD53	-0.020563
HOXC13	0.020547
MIR222	-0.020461
PTGER4P2-CDK2AP2P2	-0.020394
SLC8A2	-0.020358
SNORD73A	-0.020348
LINC01126	0.020304
IKBKG	-0.020285
CD274	-0.020152
SPTSSB	-0.020123
MIDN	0.020004
HIST1H3A	-0.019942
AKR7A3	-0.019937
SLC29A1	0.019911
HIST3H2A	0.019907
IDI2-AS1	-0.019843
TREM1	0.019778
MIR100	0.019730
ZNF600	-0.019666
MIR218-2	-0.019655
PKIB	0.019645
OR3A1	0.019644
BNC1	0.019643
MMD	0.019583
TIAM2	0.019558
LOC399898	0.019553
LOC100131373	-0.019543
PPM1K	-0.019537
FOSL2	0.019500
VLDLR	0.019377
MIRLET7G	0.019359
LINC00889	-0.019343
LOC441268	-0.019315
SNORD105	-0.019287
OR2G6	0.019258
HILPDA	-0.019180
OR6P1	-0.019169
C9orf57	-0.019140
PDIK1L	-0.019118
CEBPD	-0.019080
IL22RA2	-0.019028
KCTD16	-0.019018
PTX4	0.018870
KIF27	-0.018858
CARD11	-0.018853
IRAK2	0.018834
GPR160	0.018821
TMCC3	0.018805
MIR30A	-0.018791
BCL3	0.018767
KCNA7	0.018739
KDM7A	0.018729
KRTAP10-9	-0.018690
TDGF1P3	-0.018685
PCDHA6	-0.018575
HNF1A-AS1	-0.018571
COL4A1	0.018568
BLOC1S2	0.018521
TMEM88	0.018519
OR13J1	-0.018415
HELT	0.018404
IL11	0.018370
WNT7B	0.018368
DUSP4	-0.018363
LOC101928673	0.018304
SNORD116-22	0.018282
DBIL5P	-0.018269
CYP4A11	-0.018209
NFKBIA	0.018183
EID3	-0.018163
FAM83C	-0.018143
MMP2	0.018110
IL1B	-0.018086
KRTAP5-10	-0.018077
MYBPC2	-0.018045
ZNF77	-0.018043
ANXA6	-0.018034
SPHK2	0.018014
OR52B6	0.018009
CLDN4	0.017992
ESPNP	0.017974
GLIPR2	-0.017960
MDFI	0.017954
B4GALT1	0.017944
SLC25A37	0.017939
SOSTDC1	-0.017933
C1QTNF9	0.017919
TMEM120B	0.017897
C9orf53	-0.017875
INHBA	-0.017866
PIGZ	-0.017839
MAP3K2	0.017826
FURIN	0.017799
CXorf23	-0.017769
SH3BP2	0.017769
CDC42EP1	0.017755
SNORD38B	-0.017730
TLL2	-0.017716
TMEM81	-0.017656
HYPM	-0.017649
RNU4ATAC	0.017624
GPR111	0.017610
HCRP1	-0.017587
DLEU2	0.017582
SNORD116-20	0.017555
SNORD33	0.017543
MT1M	-0.017525
KIAA0125	-0.017450
SNORD38A	-0.017424
LY6K	0.017424
KBTBD7	-0.017416
CRISP3	-0.017371
CYP2B7P	0.017356
IL17RD	0.017347
MYPN	0.017327
FAM86C1	0.017295
PCDHB5	0.017287
PEX26	0.017252
LOC613266	0.017248
SNORD8	0.017232
LOC400968	-0.017217
DNAJB1	0.017201
ACVR2A	-0.017190
OR8S1	0.017182
LOC283588	0.017169
FBXO32	-0.017139
TSC22D4	-0.017111
SLFN14	0.017107
ZNF281	0.017107
NEUROG3	-0.017106
LINC00094	-0.017089
TMEM51	0.017084
NEK11	-0.017052
ARRDC3	-0.017051
NCOA7	-0.017051
RNF19B	0.017043
LOC100506127	-0.017035
FLJ45248	0.017003
S100A2	0.017001
KIF2B	-0.016945
OR1D5	0.016917
ZNF503-AS2	-0.016911
MYEOV	0.016892
FUT3	0.016858
APOBEC3H	-0.016855
TNFAIP3	-0.016817
MIR34B	-0.016731
OR52W1	-0.016713
ADAMTS1	-0.016708
OR51Q1	0.016700
MIR24-2	0.016669
ERRFI1	-0.016656
VDR	0.016639
SOX15	0.016639
MIR137HG	-0.016636
FETUB	0.016631
SH3BP4	0.016630
KLF7	0.016629
CHD5	0.016595
TRIML2	-0.016587
SNORD36B	-0.016583
HOXA9	0.016566
HSP90AB4P	-0.016566
LOC613206	-0.016559
IL6R	0.016556
C1orf111	0.016533
ARID3A	0.016516
SNORD6	-0.016501
HARBI1	0.016495
TCAP	-0.016487
RNPC3	0.016476
NRP2	0.016468
SNORD50B	-0.016448
LINC01521	0.016442
ADAMTS3	-0.016435
MYCNOS	-0.016416
ERVH48-1	-0.016415
SNORD59B	-0.016401
ZDHHC14	0.016389
ZNF69	-0.016384
NPB	0.016384
SMIM10	0.016371
CCR7	0.016369
SFR1	0.016361
WIPF3	0.016358
GNG2	-0.016350
SP8	-0.016330
CATSPER2	-0.016326
PRMT2	-0.016320
HIST1H2AM	0.016312
RAB11FIP4	0.016273
SMOX	0.016228
HAP1	-0.016225
HPS6	-0.016223
KIAA0226L	-0.016212
SNORD41	-0.016210
KAZN	0.016160
NFKBIL1	-0.016152
PLEKHA3	-0.016123
NABP1	-0.016057
LARP6	0.016053
ALPPL2	0.016049
STON2	0.016036
ARID5B	-0.016015
ZNF578	0.016005
BPIFA1	-0.015998
FOXA1	-0.015988
GLIS2	0.015982
LRRC75B	0.015981
C19orf54	-0.015975
FERMT1	0.015970
OR5AU1	-0.015969
NCMAP	-0.015967
IRF2BPL	0.015942
LCA5	-0.015928
MIR26B	-0.015927
CCSER1	0.015914
NAV2	0.015911
C2orf57	-0.015889
ZNF420	-0.015861
GCNT1	0.015850
LOC100131792	-0.015838
HTR3D	0.015826
SNORD37	0.015807
KPNA7	0.015807
FLJ13744	-0.015805
FOXL1	-0.015795
SMURF2	0.015791
PFN3	-0.015773
PRR15L	-0.015759
TINAGL1	0.015747
INTU	-0.015745
TMEM191A	-0.015737
LOC645261	0.015734
RNF43	-0.015724
TSR2	-0.015720
CXXC5	0.015713
CCDC85B	-0.015709
CRNN	-0.015707
KCNIP2	-0.015691
CNTNAP2	-0.015676
SYNGR4	0.015675
LOC101927181	-0.015658
MIR31	-0.015650
ADIG	-0.015616
IL12A	-0.015605
MRC2	0.015596
SNORD116-15	0.015586
TMEM229A	-0.015570
SNORD96B	0.015558
FIBIN	0.015558
HMP19	0.015500
C5orf64	0.015499
XAGE3	-0.015474
TRIM68	-0.015457
TEKT5	-0.015452
TFAP2A	-0.015449
SYT14P1	-0.015442
LINC00518	-0.015435
MAMSTR	-0.015403
FAM9B	-0.015399
RAP1GAP	0.015398
ZNF174	-0.015397
ASB9	0.015378
HBZ	0.015328
LOC100134868	-0.015324
CFD	0.015311
GPR35	0.015310
ARHGAP30	0.015296
EVA1A	0.015290
CHAD	0.015282
GHRHR	-0.015279
UCA1	0.015277
ZNF750	0.015271
AGRP	-0.015266
SNORD60	0.015239
MIR141	-0.015231
ARL15	0.015198
SP140L	-0.015187
NKX6-3	-0.015182
USP27X	0.015170
GDAP1L1	-0.015167
CCDC106	0.015142
GPR31	0.015137
COMMD6	0.015117
BAI3	-0.015115
PLAC4	0.015109
MEFV	-0.015081
LOC284009	-0.015068
RAB30	0.015062
DPP6	-0.015033
SCGB2B2	0.015016
FZD4	-0.014991
TMEM176A	0.014991
GAL3ST4	0.014984
S100B	-0.014975
ADM	0.014974
OR56A5	-0.014972
KRTAP10-4	-0.014936
RPRM	-0.014928
ZNF100	-0.014922
PYGO2	-0.014915