!direction	0
!num_genes	500
!diffexp_method	chdir
!cutoff	500
!correction_method	None
!threshold	None
!organism	Homo sapiens
!gene	LRRK2
!cell	WT ESC, mutant iPSC
!perturbation	LRRK2 G2019S mutation (heterozygous)
!disease	PD
!end_metadata
DLK1	-0.129204
BCHE	0.083599
SOHLH2	-0.083181
GREM1	-0.081417
GABRA1	-0.080955
PCDH8	-0.079606
NLRP2	0.072660
ZNF562	0.067173
LEFTY1	0.067050
ZIC1	-0.064576
TUBBP5	0.064148
GTF2H2B	0.061879
PTPN20B	0.061600
DKFZP564C152	0.060796
CLC	-0.060763
MOCOS	-0.056909
SIX3	-0.055945
ELP5	-0.055521
ACTG2	0.053901
RWDD2B	0.053861
TXNIP	0.053025
NPTX1	0.052181
RPRM	-0.052080
EGR3	-0.052062
ABCG2	-0.051777
STMN2	-0.051065
CXCL5	0.050950
CHODL	0.050116
LUM	-0.049951
DDX43	0.048970
SNHG17	0.048784
KLHL4	0.048478
SLC39A4	0.048189
IER3	0.047832
HAPLN1	-0.047817
PDGFA	-0.047644
ACOX2	-0.047594
LHX2	-0.047468
HIST1H2BK	0.047442
CTSK	0.047160
PROS1	0.046987
TSPYL5	0.046400
SST	-0.046011
MYH2	-0.045931
ELAVL4	0.045581
TIMP4	-0.045427
ENC1	-0.045346
ID4	-0.045076
TNFRSF11A	0.044931
TRIM22	-0.044101
DDX58	-0.043567
GUCA1A	0.043556
CPS1	-0.043417
RTN1	0.043349
OXSM	0.043147
PRDM14	-0.043037
STON1	0.042330
MX1	0.042078
LGI1	-0.041914
CUZD1	0.041229
PDZD2	0.041171
LHFP	-0.040864
CCNA1	-0.040176
CTSF	0.040164
INSM1	-0.040022
DAZL	0.039714
GNA14	0.039684
DENND1B	0.039612
CAMTA1	0.039353
MYO1D	0.039338
SLFN12	0.039228
TNFRSF11B	-0.038959
UTF1	-0.038861
VIL1	0.038779
FZD10	-0.038663
TRPC4	-0.038560
MOXD1	0.038187
PIGB	0.038028
USP3	0.037861
SNAI2	-0.037837
LPL	0.037798
HESX1	-0.037718
H1F0	0.037366
LCP1	0.037269
HGSNAT	0.037054
LMO3	0.036591
KLF11	0.036556
PLBD1	0.036378
FOS	-0.036330
SOAT1	-0.036108
RPH3AL	-0.035946
RIPPLY3	-0.035795
POSTN	-0.035779
SERPINB4	0.035727
CCT6B	0.035658
FAM124B	0.035593
CDH6	-0.035555
DLX5	-0.035452
CCNE2	-0.035319
PHC2	0.034829
WIF1	-0.034770
TMEM180	0.034668
KLKB1	-0.034568
PSPH	-0.034344
ASTN1	0.034138
CALML4	0.034107
NUDT6	0.034008
PMAIP1	0.033848
CXCL6	0.033688
ZNF529	0.033564
TFCP2	0.033555
DHRS1	0.033506
LIMCH1	-0.033457
CBR3	-0.033441
ID1	-0.033400
SERPINB9	-0.033305
ZNF280D	0.033287
SPINK1	0.033222
GPM6A	0.033219
DDX60	0.033172
CALCB	0.032868
LRAT	-0.032716
TFPI2	-0.032714
NT5E	0.032359
EDNRB	-0.032311
MEIS2	-0.032295
PCYOX1L	0.032160
SKIL	-0.031948
TMEM80	0.031881
PCDHA6	-0.031865
SOCS2	-0.031547
EPB41L3	0.031369
SMAD7	-0.031186
ISL1	-0.031094
ACTA1	0.030906
DNAJC15	-0.030778
SCG2	0.030731
CIDEB	0.030710
GSTO1	0.030709
ZHX2	0.030707
CAMK2N1	0.030428
COL3A1	-0.030265
BBS9	-0.030247
TNFAIP6	-0.030215
ANXA1	-0.030211
ACTC1	0.030128
KDM4D	0.030108
PARM1	-0.030041
GDF3	-0.030032
PIEZO2	0.030023
PAAF1	-0.029990
NUP62CL	0.029752
RIT2	-0.029549
TFPI	-0.029479
PPP1R17	-0.029453
MAP3K8	-0.029361
GRM3	0.029202
CDA	0.029198
AJAP1	-0.029191
CCR10	0.029174
C2orf68	0.029164
PITX2	0.029129
CLGN	0.029005
TGFB1I1	0.028993
COLEC12	0.028989
OR52A1	-0.028856
COCH	-0.028842
TDRD12	0.028817
CHCHD2	-0.028778
GLCE	0.028774
MYL9	0.028689
ZIC3	-0.028656
DDHD2	0.028621
GPR137B	0.028591
COL4A5	0.028579
LEFTY2	0.028561
ZNF586	-0.028507
TRHDE	-0.028506
RUFY2	0.028501
CXCL3	0.028414
NTS	0.028383
LRRTM4	-0.028345
CBX7	0.028318
VPS41	0.028308
AMH	-0.028280
SEPP1	0.028250
DACH1	-0.028127
WNT5A	-0.028065
ZFP2	0.028006
MXI1	0.027997
SLMO2	0.027908
RLN2	0.027871
PHLDA2	-0.027823
BMP2	-0.027770
THNSL2	0.027767
SYNDIG1	0.027744
GADD45G	0.027728
SRD5A3	0.027728
MGC12488	0.027725
DPY19L4	-0.027633
ZNF124	-0.027556
CA2	-0.027525
TNIK	0.027525
LRRC2	0.027502
CD72	0.027434
LOXL1	0.027276
MPI	0.027256
TNFRSF8	-0.027200
NPY	-0.027081
SLCO4A1	-0.027011
DNAJA1	-0.026987
FAAH	-0.026948
TDRD7	0.026930
ODC1	-0.026879
MBD5	-0.026848
MN1	-0.026839
RHOH	0.026670
GATA6	0.026664
OPCML	0.026645
VAV1	0.026603
BDNF	-0.026569
HMOX1	-0.026516
ERC2	0.026500
LRIG1	0.026399
FJX1	-0.026356
SPAG1	0.026354
PLCL2	0.026343
RHOBTB3	0.026338
HIST1H4D	-0.026316
P2RX4	0.026253
GSE1	-0.026245
LSS	-0.026223
LINC00339	0.026173
PINLYP	-0.026066
HERC2P3	-0.025989
TXNRD3	0.025952
OXTR	0.025885
HIST1H3H	-0.025847
HIST1H4H	-0.025840
ELAC1	0.025748
ZNF813	0.025710
TIMM22	0.025598
DDX17	0.025592
SLITRK5	0.025520
IL11RA	0.025510
GPX7	0.025456
TAGLN	0.025455
BAG2	-0.025398
ASS1	-0.025387
PCSK1	-0.025353
OPN3	0.025328
CLDN3	0.025311
MFHAS1	-0.025230
C11orf95	-0.025196
CTAGE9	-0.025145
RNASE4	0.025138
PFKFB3	-0.025104
HES1	-0.025056
EFNB2	-0.025050
ZBTB3	-0.025041
FAM114A1	0.024917
DERA	0.024915
SYT11	-0.024901
BAMBI	-0.024788
KDM5D	0.024733
TFAP2C	-0.024674
IRX5	-0.024663
RBKS	0.024605
MYC	-0.024598
CCBL2	0.024539
AFP	-0.024526
TM7SF3	-0.024477
FLRT3	-0.024468
KCNAB1	-0.024436
CHRNA9	0.024407
CHGA	0.024359
S100A4	-0.024316
SAMHD1	-0.024293
SRY	-0.024246
SERPINB3	0.024227
FGFR3	-0.024138
THADA	-0.024058
SFRP1	0.023995
SNX10	0.023944
KLF4	-0.023939
PGAP1	0.023926
RASGRP1	0.023918
DHRS7B	0.023894
NETO2	-0.023866
CEP72	0.023810
SLC9A8	0.023802
MEIS3P1	0.023794
DIEXF	-0.023791
HSPA1A	-0.023783
WDR60	0.023724
S100A10	-0.023709
EPHA2	-0.023709
OLFML2A	0.023702
DNM3	-0.023679
SIRT1	-0.023655
SPATA7	0.023642
SLC1A1	0.023638
RRAGB	0.023634
CLIP2	0.023614
MMP9	0.023584
ZNF248	0.023567
EP300	0.023545
BCL2L2	0.023507
PRKCB	0.023506
TFAP2A	-0.023488
PLCG2	0.023444
FGF4	-0.023373
BACH2	0.023302
FKBP9	0.023302
CACNA2D2	0.023299
NDST4	-0.023286
HDAC9	0.023284
CD99	0.023277
NPY5R	0.023220
KRCC1	0.023220
PKP3	-0.023203
FTSJ3	-0.023166
TMEM2	-0.023141
PLA2G4C	0.023133
MMP2	0.023068
SH3BP5	0.023051
KAT2B	-0.023040
HIST1H1A	-0.023034
LOC389906	-0.023026
HMBOX1	0.022983
TMEM109	-0.022970
HYAL4	0.022940
RALGPS1	0.022907
KIAA1024	0.022892
SCG3	0.022884
MST1L	0.022876
MFGE8	0.022869
PDGFRA	-0.022859
DCXR	-0.022827
ERVMER34-1	-0.022765
PEX11A	0.022748
PF4	-0.022689
FST	-0.022672
MPPE1	0.022622
NR5A2	-0.022621
CD302	0.022602
KCND2	0.022595
NFE2L3	0.022581
SEMA3G	0.022567
ID2	-0.022557
TOX3	0.022535
MED17	-0.022523
FLJ42627	0.022508
GATA3	-0.022503
FAM189A1	0.022445
PEG3	0.022435
DKK1	0.022424
MCMBP	-0.022419
SOX3	0.022413
ZNF239	-0.022395
ME3	0.022365
HSPB2	-0.022340
HECA	0.022336
FOXD3	-0.022266
ARHGEF6	0.022223
ANO2	0.022211
C1RL	0.022194
CCDC181	0.022172
CHORDC1	-0.022125
TRAF5	0.022103
LMF1	0.022098
IQCA1	0.022090
PAX6	-0.022084
MCM3AP-AS1	-0.022073
CTBS	0.022069
SERPINF1	-0.022034
MRPL48	-0.022028
VPRBP	0.022008
TMEM47	-0.021982
WNT5B	0.021969
CTGF	-0.021951
C2CD2	0.021886
MSX1	-0.021875
FOSL1	-0.021870
FAM184A	0.021856
PEX11B	0.021808
NOD2	0.021798
PSMB8	0.021783
DNASE1L1	0.021783
DCX	0.021778
CRYZ	0.021751
PMP22	0.021726
NEFH	-0.021722
SNAP29	-0.021699
SLC27A3	-0.021674
PDGFD	0.021671
ZNF814	0.021643
PDLIM3	-0.021638
COA4	-0.021637
IFI16	0.021579
INHBB	-0.021567
INPP5E	0.021556
APOM	0.021526
LGALS1	0.021500
TRAPPC13	0.021491
JAKMIP2	0.021458
TMEM50B	-0.021444
SLC16A10	-0.021439
BPHL	0.021422
SUV420H1	-0.021418
RAB27A	0.021393
SCAI	0.021378
DNALI1	-0.021376
MICA	-0.021339
AMPH	0.021293
GNAL	0.021272
ISOC2	-0.021218
PON3	0.021214
HPGD	0.021211
PSMB10	-0.021203
LYPD1	-0.021198
LIMS3	0.021195
FOXO4	-0.021194
KCNMB1	0.021189
RWDD3	0.021180
GCLM	-0.021178
CELSR2	-0.021177
HHEX	-0.021152
LPPR4	0.021150
MAP3K5	-0.021142
PSTPIP2	0.021120
PRPH2	0.021114
MTHFD2L	0.021113
RBM4B	-0.021049
LAMP5	0.021041
WIPI1	0.021034
SYN1	0.021029
STAG3L4	0.020993
TAF1A	-0.020970
ZNF350	0.020944
VANGL1	0.020918
NLGN4Y	0.020892
SOX9	-0.020892
NFASC	0.020884
IRF9	-0.020855
NEDD9	-0.020849
TRAPPC4	-0.020847
CLN8	-0.020841
MGMT	0.020840
DYNLT3	0.020781
FIG4	0.020740
GRPR	-0.020735
TCL1A	0.020691
SLC2A10	0.020650
FZD6	0.020647
KIF1B	0.020641
COL21A1	-0.020639
FABP7	-0.020604
EMP3	-0.020595
H2AFY2	0.020590
NOD1	0.020588
BCL11A	-0.020576
FEZ2	0.020539
ZNF8	-0.020526
SLC12A1	-0.020512
PHF10	-0.020504
ABCG1	0.020504
KDR	-0.020503
NLGN1	0.020497
HHLA3	0.020478
LIPG	-0.020476
DGKB	0.020454
NDUFAF3	0.020393
PVRL3	-0.020391
ALDH5A1	0.020359
RIPK4	-0.020301
TPD52L1	0.020296
SOX15	-0.020248
GPSM2	0.020240
MYL7	0.020239
SULT4A1	0.020216
UPP1	-0.020207
ZNF254	0.020196
RPL39L	0.020193
NPY1R	0.020101
CST1	0.020089
C3	0.020073
PLSCR4	0.020068
C5orf28	0.020053
H2BFS	0.020049
BTBD18	0.020045
SNORA21	-0.020026
DSC3	0.020026
CTSO	0.020015
JADE1	-0.019928
ATG2B	-0.019918
ECHDC3	0.019906
AP3B2	0.019883
MLLT4-AS1	0.019848
FEZF2	-0.019846