!direction	0
!num_genes	500
!diffexp_method	chdir
!cutoff	500
!correction_method	None
!threshold	None
!organism	Homo sapiens
!organism	Homo sapiens
!cell	MCF10A 
!cell subtype	early malignant MCF10Ca1h
!perturbation	TGFbeta treatment 
!concentration	5 ng/ml 
!time	1 hour
!disease	Breast cancer
!end_metadata
SERPINE1	0.183052
SKIL	0.121764
JUNB	0.113709
MYC	-0.113312
TMEM88	0.110698
SMAD7	0.108458
DLX2	0.107491
GADD45B	0.107017
CTGF	0.105785
BHLHE40	0.105717
ID1	0.102548
HES1	0.101930
ID3	0.099666
MIR221	-0.097868
MIR21	0.092072
KLF10	0.089813
EFNA1	0.087794
OVOL1	0.083340
ETS2	0.079133
SNAI2	0.074236
SEMA7A	0.070671
KDM6B	0.066722
PLK2	-0.066689
SPRY1	-0.065947
ID2	0.065660
LINC00472	-0.064996
FAM43A	0.063912
KCTD11	0.061820
MIR30C2	-0.057796
SIK1	0.057488
LOC344887	-0.055362
CSRNP1	0.054018
TGIF1	0.053359
GEM	0.052778
C5orf46	0.051747
JUN	0.051631
TGFBI	0.050756
VASN	0.050396
TBX3	0.049968
PIM1	0.048396
CYR61	0.046605
NOG	0.045722
MIR181A2	0.044584
BCOR	0.043486
MIR181B2	0.043240
LBH	0.042605
NET1	0.041431
NFKBIZ	-0.041077
MXD1	0.040948
FERMT1	0.040640
CAPNS2	0.040532
BLID	-0.040383
TUFT1	0.039512
LFNG	0.039323
MIR181B1	0.038921
ADRB2	-0.037547
KLF6	-0.037350
RHOB	0.036644
IER3	0.036406
IL11	0.035971
KLF4	0.035804
COL8A1	-0.035386
LOXL4	0.035039
GRAP	-0.034865
SPSB1	0.034657
C1orf106	0.034463
IVNS1ABP	0.034415
ZNF487	0.034414
ITGA2	0.033985
NUAK2	0.033798
ZC3H12A	0.033481
ADM	0.033332
KCNK5	0.033165
PMEPA1	0.032551
BHLHE41	0.032372
FAP	0.032065
VEGFA	0.031699
CITED2	-0.031694
PPP1R3B	0.031406
ZNF217	-0.031213
YOD1	0.030976
KLF7	0.030901
MIR31	-0.030511
DUSP6	-0.029940
PMP22	0.029307
NREP	0.029276
PFKFB3	0.029232
MAP3K1	0.029218
PLA2G10	0.029136
TXNIP	-0.029111
DZIP1L	0.028884
SERTAD4	0.028473
SMOX	0.028453
DLGAP1-AS1	0.028451
MIRLET7BHG	0.028264
LONRF3	0.028152
FLJ36840	-0.027967
FOS	0.027626
PHLDA1	-0.027556
ZDHHC11	-0.027439
ADCY10P1	-0.027040
TIGD2	-0.026774
C6orf99	-0.026598
S100B	-0.026310
PLAU	0.026230
CDK5R1	0.026206
RARA	0.026125
PI15	-0.026089
IL1A	-0.025918
DKK1	-0.025739
ESPN	0.025689
B4GALT1	0.025579
PLEKHF1	-0.025510
FLJ45950	0.025407
USPL1	0.025256
SLC25A37	0.024961
IFNE	-0.024953
KCNA7	0.024867
FAM217B	-0.024583
HOXC11	0.024561
ANGPTL4	0.024531
BCL2L11	0.024531
TMC7	0.024442
TNS4	0.024373
SOCS6	0.024359
PTHLH	-0.024295
WNT9A	0.024190
LOC100287290	-0.024100
MYEOV	0.024014
LINC00634	-0.023889
SNORA74A	-0.023838
GADD45G	0.023828
RNF168	0.023740
HIST1H2BF	-0.023697
STON2	0.023636
KBTBD7	-0.023484
AMIGO2	0.023313
NOL4L	0.023270
FLJ34521	0.023179
LNX2	0.023143
HIST1H2AK	-0.022994
ENC1	0.022989
EID3	-0.022958
KLF5	-0.022951
SFR1	0.022951
TEX29	0.022938
PDK4	-0.022928
HIST3H2BB	-0.022918
LAIR2	0.022885
PDGFB	0.022861
RNF217	0.022850
CYB5D1	0.022780
KIAA0226L	-0.022707
FLRT3	-0.022695
EIF1AD	0.022624
IRF2BP2	0.022616
LOC100288884	-0.022615
LOC441956	-0.022364
LOC441233	0.022315
LARP6	0.022215
SPATA3	0.022204
ERRFI1	-0.022188
SPHK1	0.022156
HIST1H2BC	-0.022126
ADAMTS15	0.022089
ITPRIP	0.022064
MIR24-2	0.021991
AP5B1	0.021641
DLX1	0.021603
HIST1H2AJ	-0.021578
LZTS1-AS1	0.021544
ARNTL	0.021494
MMP16	0.021344
RASD2	0.021334
PTGS2	0.021325
HIST1H3B	-0.021322
RYBP	0.021226
FOSL1	-0.021216
KRT80	0.021208
METRNL	0.021202
VGLL3	0.021167
MISP	0.021142
CEP57L1	-0.021086
TMEM232	0.021049
ZBTB42	-0.020981
CLUHP3	-0.020975
C5orf15	0.020906
KEL	0.020860
L3HYPDH	-0.020749
LRRC8C	0.020639
BAMBI	0.020602
LY6G6D	0.020590
TCTEX1D2	0.020538
FAM177A1	0.020534
FGF1	0.020513
MIR125B1	-0.020444
SNORD59B	-0.020438
MT1F	0.020339
LAMB3	0.020334
OCLM	-0.020315
KIAA1654	-0.020312
C3orf52	0.020270
HMGN4	-0.020227
ZNF589	-0.020193
RNF43	-0.020155
CXCL2	-0.020142
FLJ11710	-0.020141
RNF19B	0.020050
LINC00052	-0.020049
PLEKHF2	0.019946
DHRS3	0.019898
CAMKMT	-0.019853
ABCD1	0.019842
SNORD14E	-0.019707
ALOX5AP	-0.019688
CCDC88C	-0.019683
TNFAIP8L1	0.019677
PPARGC1A	0.019674
MAGEL2	-0.019665
BMP4	-0.019641
FAM83G	0.019627
ZNF749	-0.019623
KCNQ1DN	-0.019594
ADAMTS1	-0.019589
TMEFF1	0.019567
SNORD57	-0.019566
FRG1B	-0.019549
PXDC1	0.019544
TFAP2A	-0.019532
HIST1H1B	-0.019488
RAB3D	-0.019433
TBCC	-0.019403
COL1A1	0.019375
MMD	0.019326
TIGD4	-0.019321
SGK1	0.019318
TM4SF19	0.019267
ZNF69	0.019266
EPGN	-0.019221
TSPAN2	0.019175
SPRED3	-0.019119
KIAA1147	0.019074
TWIST1	-0.019006
MOB3C	-0.018959
CD274	-0.018947
OR13C5	0.018946
SLC30A1	0.018918
CSGALNACT2	0.018842
UBL3	0.018793
ZNF184	-0.018770
SNORA31	-0.018759
GPR157	0.018749
PIK3IP1	0.018706
RTN4RL1	-0.018679
ULK1	0.018583
STBD1	0.018572
LCE3D	0.018543
TMEM60	0.018536
VN1R3	0.018520
LOC100131826	-0.018494
PLA2G4D	0.018483
COL4A1	0.018470
ZBTB39	0.018455
IFFO2	0.018383
GRHL1	-0.018338
IFITM5	-0.018337
DTX2	-0.018295
SCARNA5	0.018295
FLJ42627	-0.018290
KIRREL3	-0.018232
CCDC90B	0.018206
FOXO3	-0.018189
GPRC5B	0.018161
SCX	-0.018156
TNK2-AS1	0.018149
ASPHD2	0.018139
DDIT4	-0.018113
NLRP10	0.018073
HOXB2	-0.018049
PMAIP1	-0.018003
CHMP2B	0.017953
P2RY2	0.017951
PLAUR	0.017916
HPGD	0.017896
PRICKLE3	-0.017790
MIRLET7I	0.017783
HIST1H1T	-0.017777
HIST1H2BM	-0.017776
FLJ32154	-0.017759
TIFA	-0.017738
PLEKHA1	0.017720
ZNF629	-0.017715
EFNA3	0.017712
BNC1	0.017698
RCHY1	0.017666
ERMARD	0.017605
HIST1H1C	-0.017590
C6orf141	0.017559
PNMA1	0.017543
FAM102B	0.017483
ALDH2	0.017479
LOC654342	-0.017478
SLC28A3	0.017465
GPR21	-0.017433
NDUFV3	-0.017424
ZNF510	-0.017379
LEMD3	0.017379
IL1B	-0.017375
BIRC2	0.017358
NR1H3	-0.017348
SCARNA16	-0.017275
TIPARP	0.017272
ZNF121	-0.017254
SOST	0.017215
DDAH2	0.017182
LINC00889	-0.017177
KDM7A	0.017162
RNU4-2	0.017138
CYP27C1	0.017134
TMEM132C	0.017117
LDOC1L	0.017112
TAS2R3	-0.017109
ZNF296	-0.017089
SNORD42A	-0.017087
SHF	-0.017069
C1QTNF6	0.017042
FAM174A	0.017010
GLIS2	0.016994
PCDHB15	-0.016942
HIST1H3A	-0.016939
USP43	0.016924
ACBD4	-0.016900
RPUSD2	-0.016899
PPAP2B	0.016896
SIRPB1	0.016894
MYL4	-0.016894
BCL6	-0.016888
CLDN4	0.016876
SEC14L3	0.016872
GPR17	-0.016866
RBMXL2	-0.016859
FTMT	-0.016857
CLCF1	0.016846
AGER	-0.016810
CRB3	-0.016792
R3HDM2	-0.016727
HOXC13	0.016700
TFEB	0.016690
BTBD3	-0.016674
C18orf25	0.016673
MCEE	-0.016650
OR2T8	0.016648
C7orf34	0.016644
ESRRA	-0.016637
BAG4	-0.016630
HIST2H2AB	-0.016607
DUSP19	0.016601
ITGB6	0.016596
ZNF281	0.016576
SNORA71A	-0.016564
SH2D1B	-0.016552
TCF23	0.016533
HIST1H2BH	-0.016531
C2CD4B	0.016506
HLA-DPA1	-0.016493
RASGEF1B	0.016470
CIART	-0.016463
APOBEC3G	0.016449
SLC5A5	-0.016440
SNORD13	-0.016427
MLXIP	0.016415
OSR1	-0.016407
TYW1B	-0.016402
PMS2CL	-0.016401
TRPV6	0.016377
CST6	0.016342
ACOT1	0.016333
HIST1H2BB	-0.016321
GPR6	-0.016311
SNAI1	0.016301
OR4D5	0.016289
CXXC5	0.016285
HIST1H2AC	-0.016262
FEZF1	0.016249
APOPT1	0.016227
MCM3AP-AS1	-0.016219
MYLIP	0.016218
DEFB124	0.016206
NDUFB1	-0.016175
ZNF791	-0.016172
DNAJC22	-0.016148
BMF	0.016139
UBALD1	-0.016139
AZIN2	0.016139
CLN8	0.016137
SKI	0.016095
ZNF593	-0.016095
SRRD	0.016092
C1orf116	-0.016081
KIAA0247	0.016061
SOWAHC	0.016023
LOC399898	0.016022
LOC653924	-0.015975
SNORA71C	-0.015962
SYDE2	0.015959
LEFTY2	0.015949
FA2H	0.015947
GATA3	0.015930
MKRN3	0.015924
LOC731157	0.015890
LPCAT4	-0.015889
PAX9	-0.015861
ZNF594	-0.015848
DTWD1	-0.015839
RASAL3	-0.015825
VAX2	-0.015824
TLR9	0.015815
SOX15	-0.015800
C1orf131	-0.015800
CST4	-0.015799
VLDLR	0.015795
RPL34-AS1	0.015789
KRTAP10-4	0.015784
MIR23A	0.015779
UGT2B7	0.015771
PCDHB17	-0.015767
GRIPAP1	0.015767
LINC01152	-0.015767
SCIMP	0.015752
ACOX3	0.015747
SPTSSA	0.015742
BHLHA9	-0.015724
ALKBH8	0.015688
HILS1	-0.015661
SLC22A4	0.015658
SNORA38B	-0.015636
CTSG	-0.015628
ATF3	0.015617
VWA5B1	0.015595
ATP2B3	0.015592
HIST1H4D	-0.015566
HIST1H3G	-0.015556
HIST1H1E	-0.015537
CD3EAP	0.015524
SEMA6A	-0.015516
ZNF780B	-0.015511
EDIL3	0.015511
DUSP22	0.015498
UFSP2	0.015488
HSD17B7P2	-0.015466
TRAF3IP2	0.015466
HERC3	0.015430
ZNF365	0.015410
BAG5	0.015404
HIST4H4	-0.015360
SMAD6	0.015284
LAPTM5	0.015246
RPL13AP17	-0.015244
GHSR	0.015238
MIR99B	-0.015233
NUSAP1	-0.015233
PARD6B	-0.015221
KRTAP15-1	-0.015207
HSD3BP4	-0.015203
ZNF561	-0.015119
SLC41A2	0.015112
IKZF5	0.015110
NUAK1	0.015103
SOD3	-0.015102
LOC375196	-0.015085
CAPRIN2	0.015073
SRSF8	0.015060
MKNK2	-0.015057
LCT	-0.015052
NRIP1	0.015048
NOBOX	-0.015046
SMURF2	0.015044
MS4A8	-0.015037
KRTAP13-3	-0.015032
LOC392364	-0.015002
MITF	-0.015001
DHRS2	0.015000
PHC2	-0.014947
PPM1H	-0.014929
DUSP8	-0.014908
MRPL23	-0.014899
TFAP2C	-0.014885
FURIN	0.014876
TAS2R10	-0.014871
SLC26A6	0.014869
TMEM154	0.014866
BTNL2	-0.014861
GLS	0.014844
MCCD1	0.014843
C9orf91	0.014830
OXGR1	0.014824
POU2F2	0.014801
LOC388022	0.014781
TMEM239	-0.014726
TNFAIP3	-0.014724