!direction	0
!num_genes	500
!diffexp_method	chdir
!cutoff	500
!correction_method	None
!threshold	None
!organism	Homo sapiens
!organism	Homo sapiens
!cell	MCF10A  
!cell subtype	highly malignant, metastatic MCF10Ca1a.cl1 
!perturbation	TGFbeta treatment 
!concentration	5 ng/ml  
!time	6 hours
!disease	Breast cancer
!end_metadata
SERPINE1	0.149228
TGFBI	0.113264
SEMA7A	0.098507
PTGS2	0.081393
AKAP12	0.075782
ADAM19	0.074346
PMEPA1	0.074221
PLAU	0.071710
FAP	0.065330
FLRT2	0.062904
FN1	0.061874
SLC6A14	-0.061857
LRRC8C	0.061802
JAG1	0.060809
PLA2G4A	0.059713
DCLK1	0.057363
ITGA2	0.057119
FERMT1	0.056700
SLC2A12	0.054563
TNS4	0.054322
SNAI2	0.053615
KLF7	0.053491
ITGB3	0.052424
SERPINE2	0.052142
COL4A1	0.052090
BMP2	0.051645
LAMC2	0.051396
CTGF	0.051240
CHST11	0.050949
IGFBP5	0.050413
PLEK2	0.050279
JUN	0.049688
SKIL	0.049246
MRAP2	0.049203
MIR21	0.048965
FERMT2	0.048085
EPHB2	0.047761
C3orf52	0.047013
TM4SF19	0.046299
HERC3	0.046244
GRB10	0.046161
ZNF488	-0.045891
AMIGO2	0.045703
PGM2L1	0.045384
NAV2	0.044977
TSPAN2	0.044521
INPP4B	0.044209
CSF1R	0.044165
LTBP2	0.044022
ABLIM3	0.043676
PDLIM7	0.043399
FOS	0.042274
CDH2	0.042059
FRMD3	0.041894
CDH19	0.041842
SLC29A1	0.041810
SPTSSB	-0.041337
FAM214B	0.041250
CYR61	0.041052
TTPAL	0.041046
ARL15	0.040968
GABRP	0.040841
JUNB	0.040644
SPOCK1	0.040563
LAMB3	0.040142
CD180	-0.039859
BMPR2	0.039681
ANGPTL4	0.039461
CEP170	0.039360
PDCD1LG2	0.039305
HERPUD1	0.039281
TUFT1	0.038907
ELF3	-0.038427
ADAMTS15	0.038375
PLK2	-0.037693
IL12A	-0.037689
KHDRBS3	0.037318
MMP2	0.037223
ANKRD22	-0.037147
SNORD78	-0.036528
BPGM	0.036256
ITGB6	0.036004
SMAD7	0.035974
SNORA74A	-0.035873
KLHL13	-0.035864
MBOAT2	0.035628
GPRIN3	-0.035353
PMP22	0.035073
VLDLR	0.035067
CD274	0.035025
MACC1	-0.034845
THBS1	0.034786
POLR1B	-0.034757
LPXN	0.034550
DENND2C	0.034286
IL1A	0.034255
AHNAK2	0.034250
PDK4	-0.034124
PXDC1	0.033777
ULK1	0.033703
VGLL3	0.033659
GEM	0.033590
STK32A	0.033560
PIK3R3	-0.033544
KPNA7	0.033518
KCTD11	0.033506
PTHLH	0.033481
TIAM2	0.033472
TNFAIP6	0.033447
GLIS3	0.033296
NFATC2	0.033107
RAB11FIP4	0.033097
PRDM1	0.033067
JPH1	-0.033043
MTSS1	0.033002
ABHD2	0.032930
IER3	0.032678
GLUL	-0.032605
SNORD75	-0.032507
GXYLT2	0.032499
C3orf67	0.032478
LRIG1	-0.032230
DOCK4	0.032090
RPSAP52	0.032077
IL11	0.031928
TBC1D2B	0.031910
CYP27C1	0.031836
APBB2	0.031802
BHLHE40	0.031586
TMC7	0.031305
PPAPDC1A	0.031089
TREM1	0.031061
ARHGAP32	0.031032
GPR110	-0.031017
SMURF2	0.030950
EHF	-0.030639
C1orf106	0.030616
MYB	-0.030575
SDCBP2	0.030541
MYH15	0.030510
WDR3	-0.030319
FRMD5	0.030295
SYTL5	0.030266
MYC	-0.030087
FURIN	0.030079
TGFA	0.030072
NAV3	0.030063
CYTH1	0.030036
FOXA1	-0.030033
COL4A2	0.029853
MICAL2	0.029819
SPRY1	-0.029755
OAS1	-0.029722
MMP1	0.029470
FRMD6	0.029188
ANPEP	0.029183
SNORD44	-0.029019
ARNTL	0.028979
SNORD28	-0.028965
LIPK	-0.028955
ELK3	0.028855
ITGA5	0.028842
TBC1D30	-0.028762
PODXL	0.028571
BLID	0.028534
RNF182	0.028442
SNORD30	-0.028430
LNX2	0.028283
C5orf46	0.028271
PHLDB1	0.028258
BNC1	0.028188
LRRTM2	0.028180
ATP10B	-0.028167
DHRS3	0.028159
CA2	0.028067
SLC1A3	-0.028012
SLC25A37	0.027993
CST6	0.027921
BDKRB2	-0.027874
COL1A1	0.027668
KIF3C	0.027636
CHST3	0.027558
STK38L	0.027376
HOXA5	-0.027362
DYNLT3	0.027353
LAMA3	0.027337
FNDC3A	0.027327
TFCP2L1	0.027180
CYP1B1	-0.027171
MMP10	0.027171
ST5	0.027161
NT5E	0.026978
PRKCA	0.026867
C10orf2	-0.026749
SHC4	0.026705
KLF6	0.026690
F3	0.026639
SNORD14C	-0.026596
MBLAC2	-0.026592
SEMA3D	-0.026552
SERPINB5	0.026531
S100A3	0.026445
SNORD79	-0.026440
IGF2BP3	0.026406
KIAA1147	0.026400
RNF217	0.026389
SCNN1A	-0.026345
GLS	0.026325
SPTLC3	-0.026248
TRPV3	0.026069
ALKBH8	0.025926
ITGAV	0.025923
DAAM1	0.025893
DEPTOR	-0.025863
TNFAIP1	0.025839
AFAP1L2	0.025728
PLEKHG1	0.025674
HEG1	0.025669
RASSF6	-0.025666
DENND2D	-0.025657
FJX1	-0.025620
PTPRE	0.025585
RTKN2	0.025515
SNORD74	-0.025496
SNTB1	-0.025428
ATXN1	0.025425
ETS1	0.025400
LOC100287290	-0.025382
SLC35G3	-0.025349
WNT7A	0.025176
ETS2	0.025168
E2F7	0.025147
SLC25A19	-0.025143
SNORD42B	-0.025112
RRS1	-0.025106
USP2	-0.025098
PTPRK	0.025095
CDK14	0.025071
TES	0.024933
PPM1K	-0.024835
SNORD14E	-0.024811
ANTXR2	0.024803
FGD6	0.024668
RIPK2	0.024665
WNT9A	0.024660
MIR181A2	0.024644
RALGAPA2	-0.024612
B4GALT1	0.024587
GCLC	-0.024566
GPD1L	-0.024563
TMEM2	0.024554
SURF6	-0.024514
LIPG	0.024492
L3MBTL3	0.024394
S100A2	0.024382
CDH11	0.024316
SH3RF1	0.024277
ALKBH2	-0.024211
HBEGF	0.024210
SNORD52	-0.024153
F2R	-0.024132
TNFAIP2	-0.024110
TRIO	0.024083
SEC14L2	0.024033
IVNS1ABP	0.023998
NCOA7	-0.023984
PLCB4	0.023952
JUP	0.023930
NEK7	0.023913
NEDD4	0.023906
PRUNE2	-0.023906
SNORD12C	-0.023897
HECTD2	0.023881
P4HA2	0.023854
TSPAN5	0.023839
AVPI1	-0.023833
DCBLD1	0.023830
EGR3	0.023799
GFPT2	0.023787
SLC16A6	-0.023713
ATP1B1	0.023711
AKAP1	-0.023657
LYPD3	0.023641
DNMBP	0.023581
POPDC3	0.023556
SNORD53	-0.023499
MAGI3	0.023474
HDGFRP3	0.023455
SLITRK6	0.023436
REPIN1	-0.023390
SNORD73A	-0.023387
LIMK1	0.023371
SPDEF	-0.023347
RNA18S5	0.023267
CD14	-0.023252
SMOX	0.023216
PDGFB	0.023190
LPCAT2	0.023184
PRKAB2	0.023164
MARS2	-0.023125
SNORD49A	-0.023125
PALLD	0.023114
WWC2	0.023080
EGR1	0.023071
STS	-0.022993
DNAJB2	0.022949
TOM1	0.022934
LOC100287896	0.022889
FAM134B	-0.022886
TLR4	0.022868
MAP3K2	0.022776
TFAP4	-0.022769
GPR56	0.022764
CSRNP1	0.022747
RHOB	0.022742
DIP2B	0.022735
TRERF1	-0.022619
LRAT	0.022615
KRT23	-0.022607
SNORD116-2	0.022599
CMTM3	0.022570
SNORD1C	-0.022538
FSTL3	0.022537
CREB3L2	0.022398
URB2	-0.022389
C2CD2L	-0.022359
DLX2	0.022354
CNKSR3	-0.022346
RAB30	0.022331
SNORD1A	-0.022330
SNORD34	-0.022283
ZNF365	0.022258
MMD	0.022250
IL7R	0.022243
SEPT6	0.022238
SH3BP5	0.022230
SIK1	0.022204
TGFB1	0.022198
FAM177A1	0.022171
PIM1	0.022166
LAMA4	-0.022164
ABCC2	-0.022083
KITLG	-0.022082
LARP6	0.022069
TGFBR3	-0.021973
PFKFB3	0.021959
LHFPL2	0.021958
TNC	0.021954
ADAT2	-0.021936
TNFSF15	-0.021929
REXO4	-0.021926
BAIAP2L1	0.021868
GDF15	-0.021859
SNORA6	-0.021790
MAMLD1	0.021763
TRIM36	0.021747
ART3	-0.021726
SLC27A2	-0.021687
SNORD45B	-0.021645
INHBA	0.021607
DLGAP1-AS1	0.021586
LIMS1	0.021551
PVRL3	0.021528
SRRD	0.021497
NCR3LG1	-0.021493
TCF4	0.021476
SNORD4B	-0.021472
COA7	-0.021430
HMGA2	0.021408
CCDC88C	-0.021395
UBASH3B	0.021393
SNX9	0.021386
TLN2	0.021332
MOXD1	0.021313
KRT80	0.021306
SNORD59B	-0.021301
MAST4	0.021283
MIRLET7A2	0.021275
MOK	-0.021265
GJB3	0.021258
RAP1GAP	0.021229
KIRREL	0.021225
DVL1	0.021212
SOX4	0.021204
ANO6	0.021147
TCF12	0.021136
CSGALNACT2	0.021134
ARRB1	-0.021116
MKNK2	-0.021115
TMEM154	0.021099
SPSB1	0.021084
SETBP1	0.021072
GPCPD1	-0.021047
GPR87	0.021014
PPL	-0.021008
SPDL1	0.021004
ST3GAL5	-0.020959
RNF19B	0.020951
AGO4	0.020946
CAPRIN2	0.020932
SKI	0.020931
KIAA0040	0.020916
SNORD45A	-0.020915
NOP16	-0.020831
ARHGAP31	0.020812
TANC2	0.020791
JMJD1C	0.020707
DUSP4	-0.020697
SMURF1	0.020696
SNORD35A	-0.020693
MSANTD3	0.020688
HRH1	0.020670
AGR2	-0.020626
IGSF3	0.020580
SPTBN5	0.020563
BIRC3	-0.020546
USP53	0.020517
WDR12	-0.020492
METTL7A	-0.020488
ESF1	-0.020477
PTPN21	0.020453
ARHGAP5-AS1	0.020430
MAP3K5	-0.020333
MT1X	0.020328
SAMD9	0.020302
DUSP10	0.020300
ADCK3	-0.020263
SLC16A14	-0.020219
SNORD45C	-0.020199
LPAR5	0.020118
LYAR	-0.020118
SRPX	0.020052
MTUS1	-0.020035
CHD5	0.019990
RERG	-0.019990
SCML1	-0.019981
SNORA1	-0.019981
TMCC1	0.019980
FLJ45950	0.019970
FAM83A	0.019964
ARL4C	0.019962
FAM86DP	0.019918
GEMIN4	-0.019912
LDLRAD3	-0.019898
ANKRD10	0.019888
C11orf54	-0.019872
IL17RD	0.019833
KATNAL1	0.019809
TMEFF1	0.019774
PPAP2A	0.019771
KIAA1161	0.019744
RNF125	-0.019743
ITPRIP	0.019656
FAM84B	-0.019653
TPCN1	-0.019578
SNORD36B	-0.019574
TIGD2	-0.019545
SLCO4A1	-0.019455
PPP1R9A	-0.019450
GEMIN6	-0.019445
FGFBP1	-0.019438
ECE1	0.019409
GPRC5B	0.019393
SNORD43	-0.019373
COBL	-0.019362
CLMN	-0.019334
EGR2	0.019330
FGF1	0.019327
POLR1C	-0.019323
DDX55	-0.019313
FAM171B	-0.019294
TUBA1A	0.019288
WDR43	-0.019265
KLHL8	-0.019253
BDKRB1	-0.019248
NT5DC2	0.019200
SPECC1	0.019196
BLOC1S2	0.019189
TENM3	0.019179
PLCH1	-0.019175
LAPTM5	0.019142
TSEN2	-0.019125
SNAI1	0.019075
CBX6	-0.019046
CNTN3	-0.019045
STX1A	0.019039
PSPH	-0.019035
IL1B	-0.019028
CDCA7L	-0.019025
TBC1D19	0.019020
SNORA27	-0.019000
IRF6	0.018999
KIAA0247	0.018952
ZFP69B	0.018949
PIGA	0.018928
AGPAT9	0.018927
MRM1	-0.018912
PPAT	-0.018900
ROS1	0.018897
LOC100133299	0.018895