!direction 0 !num_genes 500 !diffexp_method chdir !cutoff 500 !correction_method None !threshold None !organism Mus musculus !cell Mouse embryonic fibroblast (MEF) !perturbation Reprogramming to iDA neuron using Ascl1, Lmx1a and Nurr1 !disease PD !end_metadata CALB1 0.067930 LRRN1 0.063907 NR0B1 0.063642 GHRH 0.060129 LMX1A 0.058165 TH 0.057584 OBP2B 0.056550 AMPH 0.056144 GAD2 0.055981 SLC18A2 0.055358 BEX1 0.054674 MRC1 -0.054645 SLC10A4 0.054388 CARTPT 0.052994 SNAP25 0.052609 RTN1 0.052591 KIAA1024L 0.052061 GNG3 0.050920 RAB3C 0.050430 CADPS 0.050347 SCG3 0.049916 MS4A7 -0.049879 ATP1A3 0.049853 CHRNA3 0.049624 NR4A2 0.048677 PEX5L 0.048367 CHGB 0.048308 TYRP1 0.047990 KRT23 0.047797 SYT10 0.047607 SSTR2 0.047034 C3AR1 -0.046995 OTOR 0.046511 PCSK2 0.046448 C8orf4 0.045852 KIAA0408 0.045802 NELL1 0.045681 PRKCQ 0.045592 NNAT 0.045153 ACE2 0.044720 RET 0.043952 NRSN1 0.043657 GRP 0.043379 C1QC -0.043367 LIN7A 0.043295 IL1RN -0.043197 PCSK1 0.043092 IL1RL1 -0.043039 CDH9 0.042979 SCG5 0.042873 CHRNA5 0.042453 RASGRF2 0.042267 CACNA2D2 0.041974 OPCML 0.041956 ELAVL4 0.041583 GPM6A 0.041550 ENO3 0.041420 CLRN1 0.041360 FABP7 0.040784 BEX4 0.040754 RIT2 0.040572 NEFL 0.040565 SCN3A 0.040274 CTSS -0.039970 OGN -0.039812 STEAP4 0.039542 INA 0.039451 PPARGC1A 0.039352 SPOCK1 0.039253 SLC6A5 0.039227 NAP1L5 0.039125 MPEG1 -0.039043 LILRB4 -0.039008 PYGM 0.038623 DYNC1I1 0.038459 HP 0.038327 ASB4 0.038310 SCG2 0.038258 EN2 0.038215 TNNC2 0.038043 GNAL 0.037887 LPPR4 0.037779 CCL19 0.037626 POMC 0.037540 PF4 -0.037494 MIA 0.037475 TAGLN3 0.037424 ST6GALNAC5 0.037420 ZCCHC12 0.037375 CD200 0.037271 MSR1 -0.037203 CYTIP 0.037200 PNMAL2 0.037160 TDO2 0.037121 SNAP91 0.036856 RASGRP3 -0.036822 HOMER2 0.036686 FBP2 0.036653 TCEAL6 0.036558 CFB 0.036479 RSPO2 -0.036412 SOGA3 0.036383 KCNIP1 0.036363 EMR1 -0.036268 ST8SIA3 0.036193 HPSE 0.036190 GPR64 -0.036188 CD84 -0.036187 DNER 0.036180 GAL 0.036089 C3 0.035593 CD68 -0.035550 FBLN2 -0.035436 NPS 0.035359 KIAA1549L 0.035235 PDZRN4 0.035184 PROX1 0.035173 GNAO1 0.035136 SERPINI1 0.034980 NPVF 0.034923 C11orf87 0.034849 CNTN1 0.034794 PCBD1 0.034684 SNCA 0.034638 SV2A 0.034637 SLC2A13 0.034529 GRIA2 0.034517 SLC24A2 0.034500 NECAB2 0.034487 ZCCHC18 0.034334 PAPPA -0.034283 ARPP21 0.034275 SERPINE1 -0.034259 SYP 0.034187 MAPK10 0.034150 COX7A1 0.034147 FAM184A 0.034077 CYFIP2 0.034059 PRUNE2 0.034045 CHRNB4 0.033676 CYBRD1 0.033532 RAB6B 0.033222 MS4A6A -0.033215 TMEM35 0.032959 SEPT4 0.032945 S100G 0.032874 SLC38A5 0.032856 NPPC 0.032788 SOSTDC1 0.032773 CADPS2 0.032673 C1QA -0.032592 PLD5 0.032544 DSCAM 0.032476 CPLX1 0.032393 SLC17A6 0.032185 TMEM255A 0.032014 SCUBE1 0.031948 STMN4 0.031943 COL12A1 -0.031940 KCNIP4 0.031918 UCHL1 0.031884 CPA6 -0.031861 JAKMIP2 0.031812 FAM111A -0.031740 FCER1G -0.031694 GDAP1 0.031685 VAT1L 0.031573 RAI14 -0.031442 KCNC2 0.031363 DNAJC6 0.031358 CLEC12A -0.031269 THBS1 -0.031267 NRK -0.031168 ZDHHC2 0.031123 CLEC4D -0.030759 C5AR1 -0.030649 TAC1 0.030633 HMP19 0.030589 TCEAL5 0.030589 EMP1 -0.030576 RASGEF1B 0.030524 AMTN 0.030522 F3 -0.030510 PCSK1N 0.030492 CNKSR2 0.030400 NMB 0.030387 PDGFC -0.030382 UNC5D 0.030376 TOX3 0.030366 GPR65 -0.030302 DISP2 0.030264 SYN1 0.030262 UCP2 0.030210 VIT 0.030148 DGKB 0.030141 LY6G6C 0.030128 CFTR 0.029999 DAPL1 0.029755 CHCHD10 0.029682 ASPN -0.029664 LAPTM5 -0.029649 SYN2 0.029615 C1QB -0.029566 LCN2 0.029555 P4HA3 -0.029549 PCP4 0.029504 CBLN1 0.029426 CDH3 -0.029369 RSPO3 -0.029317 CD180 -0.029287 CNR1 0.029272 CA3 0.029257 RAPGEF4 0.029226 GABBR2 0.029226 CENPE -0.029108 SLC44A5 0.029076 FAP 0.029009 HTR3A 0.028990 PLEK -0.028948 CNTN6 0.028878 TIMP1 -0.028811 ITIH2 -0.028800 PLAU -0.028742 PTPRC -0.028683 ENPP1 -0.028614 NUDT11 0.028557 TMEM178B 0.028555 PDE2A 0.028537 MACROD2 0.028509 MED12L 0.028492 SEPT3 0.028432 RESP18 0.028349 CCL2 -0.028331 FRY 0.028328 ITGA11 -0.028176 PGAM2 0.027995 PCDHB5 0.027965 VSTM2A 0.027951 ASTN1 0.027941 STAT4 0.027899 CTXN2 0.027852 FXYD5 -0.027827 SLAIN1 0.027809 GFRA1 0.027793 ZCCHC5 -0.027761 RUNDC3A 0.027737 LCP1 -0.027728 PENK -0.027724 GRIK2 0.027714 ETV1 0.027711 SGCD -0.027699 MYBPC1 0.027685 GCNT4 -0.027663 LRRTM3 -0.027635 CD93 -0.027539 CFH -0.027393 KERA 0.027363 LGI1 0.027361 PRSS23 -0.027335 CNPY1 0.027334 GDAP1L1 0.027333 KLHL41 0.027331 INHBA -0.027293 SOD3 0.027197 RXFP2 0.027122 ZNF483 0.027121 CNTNAP2 0.027110 TYROBP -0.027109 NPPA 0.027066 BAI3 0.027056 SYT1 0.027054 MFSD6 0.027039 DKK2 -0.026989 HAP1 0.026984 PAMR1 0.026969 ADAMTS1 -0.026962 PTPRN2 0.026853 KIF5C 0.026773 PNCK 0.026772 FOXD1 0.026751 SLC7A8 0.026744 ACTC1 0.026615 CD53 -0.026613 C11orf88 -0.026605 DDX25 0.026585 HMCN1 -0.026562 GPR50 0.026531 FAM150A -0.026485 AIF1 -0.026475 PCDH11X -0.026460 ICA1 0.026440 ECM1 -0.026424 SCN3B 0.026417 FYB -0.026392 GRIK1 0.026361 VCAN -0.026317 FAT4 -0.026311 ATP6V0E2 0.026260 BVES 0.026247 PIK3C2G 0.026239 SATB1 0.026229 TNFRSF19 0.026154 FGF7 -0.026143 KIF20B -0.026139 LHX9 -0.026099 SERPINB1 -0.026072 NEFH 0.026069 ELOVL2 0.026046 ITPKB 0.026017 SEZ6L2 0.026003 GRIK3 0.025971 NAP1L2 0.025953 SPON1 0.025931 PLCB4 0.025913 UBE2QL1 0.025829 ABHD6 0.025766 CHGA 0.025723 GABRG2 0.025694 C10orf128 -0.025663 SORCS3 0.025656 AHNAK2 -0.025637 NAPB 0.025623 DCLK2 0.025606 C17orf58 0.025524 NEUROD6 0.025475 GPD1 0.025449 SYT4 0.025419 DPYSL5 0.025403 CORO2B 0.025400 VWC2 0.025335 RNF32 0.025301 BEST3 0.025298 MYT1 0.025272 HLF 0.025251 GPHA2 0.025240 FLRT2 -0.025237 CLDN10 0.025237 FMN2 0.025223 SLC9A7 0.025219 SLPI 0.025187 EEF1A2 0.025146 PPP2R2B 0.025143 ARHGAP11A -0.025118 CASC5 -0.025080 LMOD2 0.025069 MAPK8IP2 0.025001 FILIP1 0.024949 LAYN -0.024921 TSPAN12 0.024910 GALNT14 0.024826 GNG11 0.024794 ASTN2 0.024741 SEMA3A -0.024724 FCGR2A -0.024712 HMMR -0.024691 CHRM2 0.024661 SUSD4 0.024661 FETUB 0.024614 RAPGEF5 0.024579 KCNRG -0.024567 LSAMP 0.024566 ANO3 -0.024528 KCNIP3 0.024521 GAP43 0.024519 SGIP1 0.024483 MAP7D2 0.024462 APOD 0.024436 RBP4 0.024405 CD48 -0.024368 PDE9A 0.024318 FAM198B -0.024272 SLC5A7 -0.024243 ATP8A1 0.024202 LTBP2 -0.024148 CDH18 -0.024123 HID1 0.024114 CDH4 0.024053 SYT17 0.024052 FSTL5 0.023993 OSMR -0.023964 DOCK5 -0.023911 MEOX1 -0.023899 GREB1 0.023898 SLC1A2 0.023893 SH3GL2 0.023890 MME -0.023871 TUBB4A 0.023832 DCX 0.023820 STK33 0.023817 ANLN -0.023792 IGF2BP3 -0.023741 CEND1 0.023671 CTSC -0.023636 LONRF2 0.023630 SPOCK3 0.023578 SERPINB8 -0.023562 ADCY8 0.023550 TRIM9 0.023529 MLIP 0.023527 CPXM2 0.023470 PHACTR1 0.023450 SLC16A4 -0.023422 PHYHD1 -0.023418 SERPING1 0.023407 LOX -0.023399 CENPF -0.023365 POPDC3 0.023359 CDKN2A -0.023330 ATCAY 0.023289 CYBB -0.023240 CD80 -0.023234 JAM3 0.023230 RNF208 0.023171 SVEP1 -0.023171 EDNRB -0.023135 SLCO2A1 0.023133 OLFM1 0.023059 RIMS2 0.023032 GALNT13 -0.022985 CPM 0.022972 EPB41L4A 0.022930 EREG -0.022892 ITGA8 -0.022888 MASTL -0.022870 PDE1C 0.022858 IGSF10 -0.022841 FAM196B 0.022805 RUFY3 0.022789 GDPD1 0.022770 LPAR4 -0.022768 CHL1 0.022757 NTM 0.022733 FJX1 0.022722 SPARCL1 0.022704 SHISA3 0.022700 CAPG -0.022664 DKK3 -0.022606 ATP6V1G2 0.022604 CCR5 -0.022592 CDO1 -0.022579 CEMIP -0.022555 KIAA1244 0.022526 NCAPG -0.022466 PDGFRB -0.022437 CNTFR 0.022412 CLEC5A -0.022381 ARHGAP26 0.022376 GPNMB -0.022355 RAB3A 0.022338 CRMP1 0.022336 SMOC1 0.022272 ELAVL2 0.022258 ANXA3 -0.022240 TSPAN7 0.022203 REG3G 0.022171 LSP1 -0.022112 KIF5A 0.022112 WSCD1 0.022105 PPP1R17 0.022073 ANXA1 -0.022065 SEMA3D -0.022041 GPR37L1 0.021919 NEGR1 0.021896 DCC 0.021896 COLEC12 -0.021867 EDA2R -0.021838 GRIN1 0.021836 DACH1 0.021834 SULF1 -0.021810 DAB1 0.021807 HAAO 0.021796 TLE4 0.021768 MAST1 0.021727 LYRM9 0.021726 LBP 0.021702 RAB7B -0.021690 ANGPT2 0.021666 HPGD -0.021658 NXPH1 0.021646 IL1RAPL2 0.021634 LYZ -0.021623 SIRPA -0.021605 TLR7 -0.021598 FAM26E 0.021579 MCTP2 0.021561 MEF2C -0.021550 CD109 -0.021544 CACNG2 0.021537 PGBD5 0.021527 ZNF711 0.021515 CELF3 0.021502 TNFRSF10A -0.021474 ALCAM -0.021469 ZMAT4 0.021462 MAPK8IP1 0.021439 PLCE1 -0.021436 GPSM2 -0.021430 SYT14 0.021388 PTGS2 -0.021370 FN3K 0.021369