!direction	0
!num_genes	500
!diffexp_method	chdir
!cutoff	500
!correction_method	None
!threshold	None
!organism	Homo sapiens
!organism	Homo sapiens
!cell	MCF10A 
!cell subtype	early malignant MCF10Ca1h 
!perturbation	TGFbeta treatment 
!concentration	5 ng/ml
!time	6 hours
!disease	Breast cancer
!end_metadata
SERPINE1	0.123353
ADAM19	0.080821
AKAP12	0.079584
TGFBI	0.076348
FN1	0.074647
SEMA7A	0.074446
TUFT1	0.071808
PLAU	0.069304
FAP	0.067754
ANKRD22	-0.062976
SKIL	0.061213
FERMT1	0.061090
PTGS2	0.060607
ITGA2	0.056736
DCLK1	0.056409
PMEPA1	0.055608
COL4A1	0.055541
HERPUD1	0.055297
PDCD1LG2	0.054194
TM4SF19	0.051841
TNS4	0.051466
MIR21	0.050886
SPRY1	-0.050657
CYR61	0.049821
TBX3	0.049722
FLRT2	0.049558
NAV3	0.049161
TGM2	0.048375
EPHB2	0.047921
LBH	0.046714
DEPTOR	-0.045817
KLF7	0.045366
ETS2	0.044782
CTGF	0.044398
PLEK2	0.043874
BPGM	0.043871
LRRC8C	0.043381
INPP4B	0.043217
KCTD11	0.042840
MIR29A	0.042625
MBOAT2	0.042007
ZBED2	0.041793
C4orf26	0.041542
SLITRK6	0.040921
LTBP2	0.040653
GALNT10	0.039923
RPSAP52	0.039897
SMURF2	0.039054
FAM214B	0.038998
CHST11	0.038824
ABLIM3	0.038621
KIAA0226L	-0.038575
JPH1	-0.038521
ANGPTL4	0.038389
FRMD6	0.038248
PIK3R3	-0.037910
KLHL13	-0.037659
FRMD3	0.037608
FHDC1	-0.037235
CDH11	0.036916
BMP2	0.036834
ETS1	0.036752
ITGB6	0.036735
NREP	0.036635
PI15	-0.036447
CYTH1	0.036347
MTSS1	0.036324
C3orf52	0.036035
VEGFC	0.036019
SERPINE2	0.035591
TBC1D30	-0.035470
DENND2C	0.035346
PPAP2A	0.035157
CD274	0.035134
IVNS1ABP	0.035022
ARNTL	0.034789
IL1B	-0.034772
CLDN1	-0.034753
SLC1A3	-0.034619
NEK7	0.034515
VASN	0.034510
SMAD7	0.034223
OSR1	-0.034204
AKAP1	-0.034138
TSPAN2	0.034118
PGM2L1	0.033794
CDH2	0.033506
MMP10	0.033483
LCE3D	0.033309
SGK1	0.033297
ADAMTS15	0.033258
KIF3C	0.033212
DNAJB9	0.033190
AVPI1	-0.033059
CLMN	-0.033046
NRG1	-0.032925
TTPAL	0.032651
MMP1	0.032599
B4GALT1	0.032568
LOC100287290	-0.032383
SLC16A6	-0.032226
APBB2	0.032212
CYP1B1	-0.032189
DAAM1	0.032181
PRDM1	0.032161
JUNB	0.031832
LPXN	0.031785
SLC25A19	-0.031730
RHOB	0.031693
MICAL2	0.031689
LIMCH1	-0.031661
FERMT2	0.031649
GRHL1	-0.031553
HERC3	0.031525
BMPR2	0.031510
EFNA1	0.031483
MYO10	0.031469
GPC4	0.031412
RBBP8	-0.031328
SNORA74A	-0.031136
MYC	-0.031044
PPAPDC1A	0.031021
SOSTDC1	-0.030802
LARP6	0.030637
C1orf106	0.030610
EVI5	0.030509
SLC6A14	-0.030355
ANO6	0.030309
AMIGO2	0.030254
TLL1	0.030189
PHLDB1	0.030188
MYB	-0.030153
GLIS3	0.030145
ADAMTS6	0.030121
C5orf46	0.030070
SPSB1	0.030047
CREB3L2	0.030010
SMOX	0.029933
LCE3E	0.029897
SPP1	0.029788
LAMB3	0.029695
TFAP2C	-0.029686
C10orf2	-0.029651
CEP170	0.029616
SEMA3D	-0.029561
FSTL3	0.029520
TFAP4	-0.029503
POLR1B	-0.029497
MAP1B	0.029482
CAPRIN2	0.029198
CYP27C1	0.028919
KCNK2	-0.028900
POLR1E	-0.028880
SNAI2	0.028816
COL4A2	0.028790
TSPAN5	0.028712
SEC24D	0.028647
RDH10	-0.028587
WNT5A	0.028557
UAP1	0.028545
RNF217	0.028532
KHDRBS3	0.028480
MISP	0.028446
MACC1	-0.028385
CYP1A1	-0.028135
TMC7	0.027983
MLXIP	0.027946
ZNF367	-0.027903
TRIO	0.027797
WDR3	-0.027793
PIK3R1	-0.027734
SNORD30	-0.027613
TBC1D2B	0.027593
ARL15	0.027532
GEMIN5	-0.027507
ELK3	0.027417
TCF4	0.027367
AFAP1L2	0.027354
PLEKHF1	-0.027336
FAT2	-0.027327
BVES	0.027275
NCOA7	-0.027123
C19orf48	-0.027059
PTPRK	0.027028
EREG	-0.026960
GNE	-0.026952
LNX2	0.026907
GADD45B	0.026838
JUP	0.026836
BHLHE40	0.026801
GLS	0.026761
TNFAIP1	0.026707
CDCA7	-0.026705
IL12A	-0.026697
FGF1	0.026695
ARHGAP22	0.026570
RERG	-0.026557
ADAT2	-0.026512
DYNLT3	0.026466
ANTXR2	0.026451
JUN	0.026437
ARHGAP31	0.026386
SPTBN5	0.026360
APAF1	0.026355
THUMPD3-AS1	0.026186
FRMD5	0.026131
BNC1	0.026097
S100B	-0.026090
ULK1	0.026063
IGFBP5	0.026038
TSKU	-0.026010
CD180	-0.025943
HK2	-0.025922
PPFIBP2	-0.025919
ITGA5	0.025914
TRERF1	-0.025870
SLCO4A1	-0.025825
STARD13	0.025793
KLF6	0.025749
GRB10	0.025702
SMURF1	0.025695
SLC27A2	-0.025694
NEDD4	0.025550
DHRS9	-0.025521
FGD6	0.025499
CCDC88C	-0.025452
GEM	0.025402
TBC1D4	-0.025364
NCR3LG1	-0.025323
CEP170P1	0.025312
SIPA1L2	-0.025275
CDC25A	-0.025264
C1orf74	0.025205
DNMBP	0.025199
MAMDC2	0.025198
CD24	0.025172
COL1A1	0.025151
SNORD12C	-0.025114
TIMP3	-0.025055
XRCC2	-0.025036
RAPGEFL1	-0.025031
NOLC1	-0.025015
DDIT4	-0.025000
FAM83A	0.024980
CDK17	0.024887
ALKBH2	-0.024886
LINC00341	0.024885
TLE1	-0.024884
PXDC1	0.024864
C3orf67	0.024715
ENTPD7	0.024705
NGFR	-0.024705
MLLT11	0.024697
GNA15	0.024664
PPL	-0.024661
EXO1	-0.024625
FAM177A1	0.024578
SYT1	0.024547
CPEB4	0.024543
PMP22	0.024525
LRIG1	-0.024372
RBMS1	0.024301
JAG1	0.024274
DIS3L	-0.024268
SPHK1	0.024224
GCLC	-0.024160
FAM111B	-0.024117
LIMA1	0.024104
MCM10	-0.024051
NDRG1	0.024050
GXYLT2	0.023961
NRIP1	0.023919
MPZL2	-0.023851
SRPX	0.023845
LDLRAD3	-0.023842
PALLD	0.023817
ZNF165	0.023762
SPOCK1	0.023755
SNORD1A	-0.023678
NET1	0.023671
RRS1	-0.023656
ZSWIM6	0.023638
TBC1D8	-0.023602
NEIL3	-0.023575
FNDC3A	0.023538
ERO1LB	0.023498
FURIN	0.023470
PGM3	0.023427
ATP1B1	0.023418
ARHGAP32	0.023405
ANPEP	0.023389
KCNQ5	-0.023373
LAMA4	-0.023365
TRPV3	0.023354
MMP14	0.023314
BIRC3	-0.023308
CDCA7L	-0.023292
GPR87	0.023292
WNT7A	0.023274
EYA1	-0.023269
FAM60A	-0.023224
PRKCA	0.023216
SNX33	0.023186
DNAJC3	0.023172
CCDC80	0.023096
CMIP	0.023069
TGFBR3	-0.023033
KLF10	0.023033
GFPT2	0.022980
ZNF566	-0.022939
UGDH	0.022864
INPP5A	0.022837
UBL3	0.022803
SNORA56	-0.022765
IFI16	-0.022753
PNPLA8	0.022738
LOC100133299	0.022737
CBX6	-0.022736
PLCB4	0.022718
TUBA1A	0.022715
MIR181A2	0.022690
SPRED1	-0.022547
NOTCH1	-0.022539
FAM227A	0.022507
CDK14	0.022473
ORC1	-0.022460
LAMC2	0.022438
TBC1D19	0.022407
PRKAB2	0.022389
MAST4	0.022381
IFNE	0.022369
FAM114A1	0.022343
GUCY1A3	-0.022329
KRT15	-0.022327
DIP2B	0.022326
TICRR	-0.022324
GEMIN4	-0.022317
IL11	0.022239
JARID2	0.022231
ASB13	-0.022220
COA7	-0.022202
JMJD1C	0.022157
HMOX1	0.022156
DSC2	0.022120
PTPRE	0.022107
MTMR11	0.022062
P4HA2	0.022054
ZNF281	0.022039
KDM6B	0.021926
DLX2	0.021877
WNT9A	0.021861
TGIF2	-0.021854
ABHD2	0.021840
PTK2B	0.021818
ATXN1	0.021800
TSEN2	-0.021798
IFFO2	0.021786
ZNF488	-0.021733
SLC2A12	0.021726
KCNK5	-0.021695
BTBD10	0.021659
FHOD3	0.021650
TIPARP	0.021648
LYSMD3	0.021593
TMEM50B	0.021548
CBLB	0.021490
PEX5	-0.021451
MDN1	-0.021449
DDX10	-0.021418
NFIB	-0.021407
ZNF365	0.021379
YPEL5	0.021354
NRG4	-0.021348
EXOSC2	-0.021339
CHMP2B	0.021330
ITGB3	0.021269
FZR1	0.021254
SLC25A37	0.021167
SNORD42B	-0.021153
SNORD59B	-0.021139
TMEM154	0.021116
FGFBP1	-0.021110
NOL6	-0.021098
DHRS13	-0.021095
ADAMTS9	-0.021093
ROS1	0.021086
PIM1	0.021041
TMEM88	0.021024
USP43	0.021018
HTR1D	0.021015
PPP1R13L	0.021007
WNT7B	0.020996
EVA1C	-0.020991
KRT23	-0.020968
PTCH1	-0.020962
WDR35	-0.020960
CNKSR3	-0.020950
MBLAC2	-0.020892
DLGAP4	0.020866
SNORD28	-0.020865
SLC46A3	0.020861
RAB38	-0.020853
PPP4R1L	0.020805
HOMER3	0.020791
ZNF485	-0.020730
ADCY10P1	-0.020722
OCIAD2	0.020715
C18orf25	0.020688
FOXD1	0.020683
RFFL	0.020666
PPAT	-0.020657
CNTN3	-0.020649
DCBLD1	0.020638
PTPRZ1	-0.020611
MOK	-0.020602
SRGAP3	-0.020571
MDFI	0.020564
SCG5	0.020545
BIRC2	0.020528
IL13RA1	0.020501
TOE1	-0.020484
TMEFF1	0.020472
SLC5A3	-0.020441
SLC43A3	-0.020386
IL17RB	-0.020340
JAG2	-0.020335
DDIAS	-0.020333
LRRC8D	-0.020316
CCDC93	0.020316
SLC45A3	-0.020304
SNORD1B	-0.020290
SERPINB5	0.020286
ARSJ	-0.020266
SCNN1A	-0.020233
KPNA7	0.020178
KDELC1	0.020174
PDK4	-0.020140
BIVM	0.020125
FBXL2	0.020123
C14orf28	0.020111
VAV2	0.020081
TES	0.020079
PPIF	-0.020072
CHN2	-0.020066
ASPHD2	0.020063
URB2	-0.020062
CTTNBP2NL	0.020045
CDC25B	-0.019990
SNORA75	-0.019985
SIK1	0.019967
SNX9	0.019964
SYNE1	0.019963
GPD1L	-0.019933
HS3ST2	0.019924
SUSD4	0.019921
CMTM3	0.019921
WDR76	-0.019914
PPARD	0.019899
LYPD3	0.019832
ACSL4	0.019826
MXD1	0.019823
IRF6	0.019792
RYR3	0.019774
VLDLR	0.019720
MIR181B2	0.019719
KLHL8	-0.019681
ELF3	-0.019678
SAMD9	0.019649
IER3	0.019582
TIAM1	-0.019542
ADCK3	-0.019525
FAM134B	-0.019494
JADE1	-0.019484
LYAR	-0.019458
SNORD4B	-0.019446
CSGALNACT2	0.019443
NUAK1	0.019412
DTL	-0.019369
FAM102A	-0.019367
ELL2	0.019363
SLC19A1	-0.019302
ASAP2	0.019294
RNF19B	0.019289
FZD5	-0.019221
LHFPL2	0.019212
TMEM2	0.019176
CHAF1A	-0.019159
PEG10	-0.019154
ACTR3C	-0.019149
PAWR	0.019148
YIPF5	0.019145
SPATA13	-0.019132
SLC6A15	-0.019113
ST5	0.019107
HBEGF	0.019106
MKNK2	-0.019102
SRC	0.019097
PTK2	0.019093
CABLES1	-0.019087
BAIAP2L1	0.019076