!direction	0
!num_genes	500
!diffexp_method	chdir
!cutoff	500
!correction_method	None
!threshold	None
!organism	Homo sapiens
!organism	Homo sapiens
!cell	MCF10A 
!cell subtype	premalignant MCF10AT1k.cl2 
!perturbation 	TGFbeta treatment 
!concentration	5 ng/ml 
!time	6 hours 
!disease	Breast cancer
!end_metadata
MMP13	0.106145
SERPINE1	0.095415
JUN	0.082008
KCNJ15	0.077983
TNFAIP6	0.069774
PMEPA1	0.065332
ADAM19	0.062620
FBXO32	-0.058152
CTGF	0.053710
RDH16	0.053274
DHRS9	-0.051796
TGM2	0.051445
ADAMTS15	0.051252
EHF	-0.050843
PLAU	0.050068
TLL1	0.049823
CSF1R	0.049417
IGFBP5	0.049387
MIR21	0.049169
JUNB	0.048914
SLC29A1	0.048405
KLHL13	-0.047763
IVNS1ABP	0.047363
SKIL	0.046726
BHLHE40	0.046337
LTBP2	0.046231
SNAI1	0.046134
TRIML2	0.045569
KCNK2	-0.044849
SCNN1G	-0.044567
SMAD7	0.044127
LBH	0.043681
FLRT2	0.043614
CYP27C1	0.043476
MACC1	-0.043343
COL4A1	0.043278
COL1A1	0.043000
ITGA2	0.042623
ATP1B1	0.041569
SEMA7A	0.041408
SPRY1	-0.041120
PDLIM7	0.041018
PLEKHG1	0.040888
FN1	0.040841
SMURF2	0.039824
AMIGO2	0.039675
TUFT1	0.038932
JAG1	0.038876
GFPT2	0.038816
DCBLD1	0.038780
FSTL3	0.038767
DUSP10	0.038640
SLC1A3	-0.038603
IRS1	0.038504
TGFBR3	-0.038392
TGFBI	0.038330
PLSCR4	-0.038254
CYP1B1	-0.038199
PGM2L1	0.038078
EGR1	0.038048
TNS4	0.037996
SOSTDC1	-0.037840
VEGFC	0.037672
C4orf26	0.037566
PFKFB4	0.037247
KANK4	0.037008
KLF7	0.036910
KIAA1644	0.036896
AMTN	0.036684
C5orf46	0.036631
MYADM	0.036518
MMP10	0.036501
RNF217	0.036476
KCTD11	0.036033
CDK14	0.035985
HTR1D	0.035959
CHST11	0.035936
KRT23	-0.035935
ART3	-0.035752
KRT16	0.035726
GNE	-0.035688
PLLP	-0.035632
RASSF6	-0.035571
TIMP3	-0.035446
SERPINE2	0.035383
IGF1R	0.035337
SLC46A3	0.035334
LOC100287896	0.035139
IL7R	0.034910
LIPG	0.034903
IL1A	-0.034791
ARHGAP32	0.034785
PLK2	-0.034744
MICAL2	0.034708
TM4SF19	0.034593
MAP1B	0.034530
CITED2	-0.034188
CEACAM1	-0.034150
ARL4A	-0.033877
PRDM1	0.033777
DEPTOR	-0.033428
KRT15	-0.033202
TGFB1	0.033003
PDCD1LG2	0.032933
TSPAN2	0.032890
MRAP2	0.032850
SERPINB13	-0.032795
PMP22	0.032771
DAPK1	-0.032727
FERMT2	0.032610
NOG	0.032606
F2R	-0.032560
LRIG1	-0.032524
TUBA1A	0.032415
CYR61	0.032267
FURIN	0.032222
GPR110	-0.032205
SLC27A2	-0.032177
HIST1H2AJ	-0.032129
ANGPT1	-0.032121
PPAPDC1A	0.031951
LPAR5	0.031774
SYTL5	0.031769
SULT1E1	-0.031560
GLUL	-0.031470
IKZF2	-0.031442
KITLG	-0.031421
TMC7	0.030880
ARNTL	0.030782
PDK4	-0.030706
ARL15	0.030623
FHOD3	0.030556
SIK1	0.030518
LFNG	0.030435
ELF3	-0.030381
FAP	0.030335
TPM1	0.030284
FAM134B	-0.030162
GALNT10	0.030109
HERC3	0.030024
PRR5L	0.029972
LAPTM5	0.029958
LHFPL2	0.029946
GRB10	0.029899
ABLIM3	0.029853
EPHB2	0.029634
GABRA2	0.029608
ZBED2	0.029363
SERPINB5	0.029344
C1orf106	0.029256
PLEK2	0.029186
HBEGF	0.029147
GLS	0.029049
RPS6KA5	-0.028992
MCF2	0.028909
TNC	0.028902
LPHN3	-0.028884
HAS2	0.028839
STC2	0.028797
DBP	-0.028787
SGK1	0.028730
CEMIP	-0.028692
CAMK4	0.028570
FAM222A-AS1	-0.028557
KLF4	0.028475
DDIT4	-0.028439
FRMD5	0.028419
FBN1	0.028391
UCN2	0.028248
OSR1	-0.028139
TXNRD1	-0.028093
FRMD6	0.028051
ETS2	0.027945
MXD1	0.027915
LDLRAD3	-0.027894
BMPR2	0.027792
RERG	-0.027653
DUSP4	-0.027536
IGSF3	0.027479
HS3ST3B1	-0.027456
METTL7A	-0.027378
MIR31HG	0.027364
HOXA5	-0.027310
PHLDA1	-0.027302
BMP2	0.027247
MAF	0.026992
SLC7A1	0.026949
IFIT1	-0.026949
FAM214B	0.026918
TLR3	-0.026861
CLDN1	-0.026842
MAP3K2	0.026840
ALDH3A1	-0.026811
ST5	0.026770
TUBA4A	0.026735
DUSP7	0.026632
DHRS3	0.026558
RAB31	0.026496
QPCT	0.026374
VTCN1	-0.026340
TRIO	0.026301
SLC7A8	0.026186
ANKRD22	-0.026135
ID3	0.025986
WIPF1	0.025922
SPHK1	0.025917
RHOB	0.025889
ID1	0.025842
INPP5A	0.025836
NAV2	0.025820
FST	0.025807
PIK3R1	-0.025730
IER3	0.025644
LAMB3	0.025641
ASPHD2	0.025636
MIR137HG	0.025615
PRKCA	0.025613
RTKN2	0.025564
EYA1	-0.025473
TOB1	-0.025438
MARCKS	0.025430
HIST1H2AB	-0.025360
ZFP36	0.025248
PIK3R3	-0.025242
AREL1	0.025183
LOC100134868	-0.025150
CNTN3	-0.025075
EML1	0.025034
CRYAB	0.024992
OASL	0.024989
RHOBTB1	0.024980
KLF6	0.024963
NUAK1	0.024928
VASN	0.024916
CD180	-0.024902
WNT7A	0.024859
PLD1	-0.024692
SNORD42A	-0.024670
CXADR	-0.024536
MLPH	0.024465
STK38L	0.024312
FHDC1	-0.024258
NCOA7	-0.024255
GPAM	0.024237
ZNF365	0.024233
PAG1	-0.024178
ITGB6	0.024113
SOX6	-0.024102
MXRA8	0.024071
HIST1H2AH	-0.024039
TNFAIP8	0.024006
FOS	0.023967
GNA15	0.023915
SLC16A6	-0.023915
DSEL	0.023854
TFEB	0.023847
ZYX	0.023833
HERPUD1	0.023730
SSBP2	-0.023723
PPP1R13L	0.023686
AGR2	-0.023608
EML6	0.023593
SLC39A14	0.023588
KIAA1161	0.023474
CYP39A1	-0.023473
ABHD2	0.023456
FAM26E	0.023412
IFIT2	-0.023408
SRRD	0.023386
SPTSSA	-0.023385
LMCD1	0.023319
GCNT1	0.023245
DND1	0.023142
MYB	-0.023116
MTSS1	0.023107
SLC35F2	0.023101
GTF2IRD1	0.023081
RHOBTB3	0.023063
FAM185A	-0.022996
SPDL1	0.022964
GRIK2	0.022963
PHLDB1	0.022960
SLC25A27	-0.022841
AZIN2	0.022820
PVRL3	0.022812
GCLC	-0.022772
ZNF443	0.022721
SNAI2	0.022708
CRIP2	0.022625
TNFRSF12A	0.022601
KRT17	0.022502
FHL2	0.022445
SPRY4	0.022429
PIM1	0.022394
UBASH3B	0.022320
CST6	0.022296
SLC26A6	0.022262
TP53I3	0.022233
MAGI3	0.022219
KAT2B	-0.022200
CARD16	-0.022191
VGLL3	0.022174
IRX3	-0.022145
C3orf52	0.022144
ARHGAP31	0.022133
BNC1	0.022115
AOAH	-0.022053
TBC1D19	0.022052
IL1B	-0.021952
TIGD2	-0.021944
GKAP1	-0.021892
FJX1	-0.021868
GPC4	0.021836
POMT2	0.021791
LPAR6	-0.021785
VAV2	0.021785
STX1A	0.021741
TBX3	0.021740
FANK1	0.021723
IL17RB	-0.021711
LIMS1	0.021671
GADD45B	0.021666
SYT1	0.021653
ALOX5AP	0.021567
MYO10	0.021555
LIF	0.021549
DHRS13	-0.021546
NDST1	0.021539
PPAP2A	0.021483
TPST2	0.021480
FAM177A1	0.021471
PALLD	0.021471
KLF10	0.021439
RPSAP52	0.021388
SNORA74A	-0.021368
AHNAK2	0.021360
LIMCH1	-0.021299
HIVEP1	0.021277
MAMLD1	0.021277
KCTD14	-0.021233
TMC5	-0.021226
CDH11	0.021214
TLN2	0.021206
ZNF503-AS2	0.021204
GLIS3	0.021114
SLC25A37	0.021111
ZFP36L2	0.021099
GPCPD1	-0.021063
HEG1	0.021035
CSRNP1	0.020998
UQCRH	-0.020995
LOC100134822	-0.020978
PPP1R14C	0.020959
NFATC2	0.020957
MGLL	0.020933
SNORD42B	-0.020900
JUP	0.020873
LIMK1	0.020851
IFIH1	-0.020791
PDP1	-0.020753
FOLH1	0.020736
RASA1	0.020730
FOXD1	0.020708
IL17RE	-0.020690
SLITRK6	0.020669
FLJ45248	0.020645
DNAJB2	0.020637
TSPAN5	0.020633
SPSB1	0.020621
PRKAB2	0.020614
ELK3	0.020590
MTMR11	0.020489
VCL	0.020458
ATP11A	0.020436
STK32A	0.020432
AKR1B10	-0.020429
LPXN	0.020423
AVPI1	-0.020417
GUCY1A3	-0.020416
PLEKHF1	-0.020413
ITGAV	0.020407
CD24	0.020404
LTBP1	0.020381
COBL	-0.020356
GJB3	0.020326
C1orf21	-0.020314
ANKLE2	0.020307
RNF152	0.020305
KLRC3	-0.020297
SLC1A4	0.020289
GPR56	0.020281
MFAP2	0.020276
CMTM3	0.020240
RRAS	0.020232
LOC442132	-0.020230
GJA1	0.020217
CDK17	0.020205
TJP1	0.020191
TSHZ1	0.020167
ID2	0.020130
C3	-0.020119
CDKN1B	-0.020117
VDR	0.020096
GPX2	-0.020043
NDRG1	0.020029
TBC1D2B	0.019984
RNU5A-1	-0.019963
CCDC121	-0.019938
F3	0.019922
MAP3K4	0.019920
SASH1	-0.019919
FAM83G	0.019881
ABCC2	-0.019851
MED27	-0.019840
SULF1	-0.019820
PLSCR3	0.019800
THSD1	0.019750
TBL1X	-0.019733
CASP1	-0.019718
TMEM139	-0.019683
SLC31A2	0.019667
LAMC2	0.019653
MRAS	0.019645
ANO6	0.019625
HOXC11	0.019618
SNORD49A	-0.019604
STK17A	0.019582
SLMO1	0.019579
INHBA	0.019556
ROS1	0.019553
RNF43	-0.019537
ELAVL2	-0.019529
SERPINF1	-0.019523
SDF2L1	0.019520
GUCY1B3	-0.019507
NCF2	0.019491
BEND6	0.019475
CGN	-0.019473
RBBP8	-0.019462
SPTSSB	-0.019441
EIF1AD	0.019439
MTHFS	0.019431
PITPNM3	0.019411
ADAMTS6	0.019341
SHISA3	0.019339
DLX2	0.019322
HIST1H2BF	-0.019299
CXCL2	-0.019290
GYLTL1B	0.019278
PTPN21	0.019277
PDZK1	0.019266
MNS1	-0.019255
XBP1	0.019252
IFI44L	0.019251
ZNF532	0.019235
SYBU	-0.019203
ATP13A2	0.019198
PTGFR	-0.019196
PARP9	-0.019182
CA2	0.019142
GLCCI1	-0.019098
ITGB4	0.019092
TYRO3	0.019083
TFCP2L1	-0.019082
PTPRK	0.019080
ACPP	-0.019052
P4HA2	0.019031
CHST3	0.019026
IL1RAP	0.019017
HIST1H4B	-0.018930
GRAMD1C	-0.018926
ZNF703	0.018915
TANC2	0.018885
TNS3	-0.018884
RBM48	-0.018884
LOC100130713	0.018884
CCDC80	0.018874
DEPDC4	-0.018843
CMIP	0.018809
GPR87	0.018797
TSPAN1	-0.018795
FAM111B	-0.018772
PLOD2	0.018767
TGFB1I1	0.018750
SEPP1	-0.018746
ZC3H12A	0.018733
SRF	0.018725
SPOCK1	0.018709
STC1	-0.018707
ABCD1	0.018683
TRMT10A	-0.018677
YIPF5	0.018643
OXR1	-0.018637
CREB3L2	0.018627
BTN3A3	-0.018618
RFX3	-0.018558
TMEM135	-0.018556
DSE	0.018496
SUSD5	0.018479
FLRT3	-0.018467